RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 APCSP02743 223 aa7.46□□□□□ -1.22
UBE4B-210ENST00000488228 SUMO2P61956 95 aaKnown RBP7.46□□□□□ -1.22
UBE4B-210ENST00000488228 TMEM243Q9BU79 118 aa7.46□□□□□ -1.22
UBE4B-210ENST00000488228 PKD1P98161 4303 aa7.46□□□□□ -1.22
UBE4B-210ENST00000488228 DNAH11Q96DT5 4516 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 TRAV9-2A0A087WT02 112 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 A0A087WX48 190 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 TGIF2-C20orf24A0A0A6YYL0 155 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 TMEM262E9PQX1 116 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 I3L3M4 83 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 TNFRSF6BO95407 300 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 TSHBP01222 138 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 C10orf126Q8N4M7 172 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 Q8N976 141 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 PRELID3AQ96N28 172 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 Q9HAA7 133 aa7.45□□□□□ -1.22
UBE4B-210ENST00000488228 TRBV27A0A0K0K1C4 114 aa7.44□□□□□ -1.22
UBE4B-210ENST00000488228 PMCHP20382 165 aa7.44□□□□□ -1.22
UBE4B-210ENST00000488228 POLR2KP53803 58 aaKnown RBP7.44□□□□□ -1.22
UBE4B-210ENST00000488228 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-210ENST00000488228 CBLN2Q8IUK8 224 aa7.44□□□□□ -1.22
UBE4B-210ENST00000488228 TRBV24-1A0A075B6N3 115 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.43□□□□□ -1.22
UBE4B-210ENST00000488228 IGKV2-29A2NJV5 120 aaPredicted RBP7.43□□□□□ -1.22
UBE4B-210ENST00000488228 IBA57-AS1B1ANH7 110 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 PPP1R17O96001 155 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 HLA-DQA1P01909 254 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 PPBPP02775 128 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 RBX1P62877 108 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 ELOBQ15370 118 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 CHCHD7Q9BUK0 85 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 SMIM2Q9BVW6 85 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 KLK12Q9UKR0 248 aa7.43□□□□□ -1.22
UBE4B-210ENST00000488228 PRSS29PA6NIE9 313 aa7.42□□□□□ -1.22
UBE4B-210ENST00000488228 A6NJY4 79 aa7.42□□□□□ -1.22
UBE4B-210ENST00000488228 K7EP13 123 aa7.42□□□□□ -1.22
UBE4B-210ENST00000488228 UBE2L6O14933 153 aa7.42□□□□□ -1.22
UBE4B-210ENST00000488228 LAGE3Q14657 143 aa7.42□□□□□ -1.22
UBE4B-210ENST00000488228 KIAA1644Q3SXP7 199 aa7.42□□□□□ -1.22
UBE4B-210ENST00000488228 C20orf78Q9BR46 151 aa7.42□□□□□ -1.22
UBE4B-210ENST00000488228 VCYO14598 125 aa7.41□□□□□ -1.22
UBE4B-210ENST00000488228 PHOX2AO14813 284 aa7.41□□□□□ -1.22
UBE4B-210ENST00000488228 ANGP03950 147 aaKnown RBP7.41□□□□□ -1.22
UBE4B-210ENST00000488228 FCER1GP30273 86 aa7.41□□□□□ -1.22
UBE4B-210ENST00000488228 PKIAP61925 76 aa7.41□□□□□ -1.22
UBE4B-210ENST00000488228 TNP2Q05952 138 aa7.41□□□□□ -1.22
UBE4B-210ENST00000488228 UBE2WQ96B02 151 aa7.41□□□□□ -1.22
UBE4B-210ENST00000488228 YPEL4Q96NS1 127 aa7.41□□□□□ -1.22
UBE4B-210ENST00000488228 GNB1LQ9BYB4 327 aa7.41□□□□□ -1.22
UBE4B-210ENST00000488228 PKHD1P08F94 4074 aa7.41□□□□□ -1.22
UBE4B-210ENST00000488228 IGLV4-60A0A075B6I1 120 aa7.4□□□□□ -1.22
UBE4B-210ENST00000488228 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
UBE4B-210ENST00000488228 CRPP02741 224 aa7.4□□□□□ -1.22
UBE4B-210ENST00000488228 MT-ND6P03923 174 aa7.4□□□□□ -1.22
UBE4B-210ENST00000488228 ESDP10768 282 aa7.4□□□□□ -1.22
UBE4B-210ENST00000488228 RPL32P62910 135 aaKnown RBP7.4□□□□□ -1.22
UBE4B-210ENST00000488228 LINC00336Q6ZUF6 198 aa7.4□□□□□ -1.22
UBE4B-210ENST00000488228 KIR2DL4Q99706 377 aa7.4□□□□□ -1.22
UBE4B-210ENST00000488228 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
UBE4B-210ENST00000488228 MAP1LC3AQ9H492 121 aa7.4□□□□□ -1.22
UBE4B-210ENST00000488228 LAMTOR2Q9Y2Q5 125 aa7.4□□□□□ -1.22
UBE4B-210ENST00000488228 TCAPO15273 167 aa7.39□□□□□ -1.23
UBE4B-210ENST00000488228 FGF6P10767 208 aa7.39□□□□□ -1.23
UBE4B-210ENST00000488228 BTF3P20290 206 aaKnown RBP7.39□□□□□ -1.23
UBE4B-210ENST00000488228 COX19Q49B96 90 aa7.39□□□□□ -1.23
UBE4B-210ENST00000488228 AMMECR1LQ6DCA0 310 aa7.39□□□□□ -1.23
UBE4B-210ENST00000488228 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
UBE4B-210ENST00000488228 NFE4Q86UQ8 179 aa7.39□□□□□ -1.23
UBE4B-210ENST00000488228 LINC00269Q8N2A0 174 aa7.39□□□□□ -1.23
UBE4B-210ENST00000488228 C20orf203Q8NBC4 194 aa7.39□□□□□ -1.23
UBE4B-210ENST00000488228 SMCO4Q9NRQ5 59 aa7.39□□□□□ -1.23
UBE4B-210ENST00000488228 DYNC1H1Q14204 4646 aaKnown RBP7.38□□□□□ -1.23
UBE4B-210ENST00000488228 TRAV8-3A0A0A6YYJ7 113 aa7.38□□□□□ -1.23
UBE4B-210ENST00000488228 A0A1B0GVY2 172 aa7.38□□□□□ -1.23
UBE4B-210ENST00000488228 FABP9Q0Z7S8 132 aa7.38□□□□□ -1.23
UBE4B-210ENST00000488228 ENHOQ6UWT2 76 aa7.38□□□□□ -1.23
UBE4B-210ENST00000488228 DNAH5Q8TE73 4624 aa7.37□□□□□ -1.23
UBE4B-210ENST00000488228 IGKV2D-24A0A075B6R9 120 aa7.37□□□□□ -1.23
UBE4B-210ENST00000488228 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
UBE4B-210ENST00000488228 PSCAO43653 123 aa7.37□□□□□ -1.23
UBE4B-210ENST00000488228 RPL39P62891 51 aaKnown RBP7.37□□□□□ -1.23
UBE4B-210ENST00000488228 Q8N8P6 123 aa7.37□□□□□ -1.23
UBE4B-210ENST00000488228 ALKBH7Q9BT30 221 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-210ENST00000488228 TRAPPC1Q9Y5R8 145 aa7.37□□□□□ -1.23
UBE4B-210ENST00000488228 BIRC6Q9NR09 4857 aa7.36□□□□□ -1.23
UBE4B-210ENST00000488228 IGLV10-54A0A075B6I4 117 aa7.36□□□□□ -1.23
UBE4B-210ENST00000488228 IGKV3OR2-268A0A0C4DH90 116 aa7.36□□□□□ -1.23
UBE4B-210ENST00000488228 H7C423 109 aa7.36□□□□□ -1.23
UBE4B-210ENST00000488228 SCO1O75880 301 aa7.36□□□□□ -1.23
UBE4B-210ENST00000488228 REG3AQ06141 175 aa7.36□□□□□ -1.23
UBE4B-210ENST00000488228 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
UBE4B-210ENST00000488228 PRSS47A8MTI9 375 aa7.35□□□□□ -1.23
UBE4B-210ENST00000488228 ZNF25P17030 456 aaPredicted RBP7.35□□□□□ -1.23
UBE4B-210ENST00000488228 RAB5AP20339 215 aa7.35□□□□□ -1.23
UBE4B-210ENST00000488228 IFI27P40305 119 aaPredicted RBP7.35□□□□□ -1.23
UBE4B-210ENST00000488228 Q0VG73 95 aa7.35□□□□□ -1.23
UBE4B-210ENST00000488228 WFDC2Q14508 124 aa7.35□□□□□ -1.23
UBE4B-210ENST00000488228 MIAQ16674 131 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms