RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 NIT1Q86X76 327 aa10.69□□□□□ -0.7
C9orf3-219ENST00000488186 C6orf223Q8N319 242 aa10.69□□□□□ -0.7
C9orf3-219ENST00000488186 PRELID3AQ96N28 172 aa10.69□□□□□ -0.7
C9orf3-219ENST00000488186 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
C9orf3-219ENST00000488186 FCER1GP30273 86 aa10.68□□□□□ -0.7
C9orf3-219ENST00000488186 GAGE6Q13070 117 aa10.68□□□□□ -0.7
C9orf3-219ENST00000488186 NRACQ8N912 160 aa10.68□□□□□ -0.7
C9orf3-219ENST00000488186 KIR2DL4Q99706 377 aa10.68□□□□□ -0.7
C9orf3-219ENST00000488186 C20orf78Q9BR46 151 aa10.68□□□□□ -0.7
C9orf3-219ENST00000488186 CHCHD7Q9BUK0 85 aa10.68□□□□□ -0.7
C9orf3-219ENST00000488186 PHOX2AO14813 284 aa10.67□□□□□ -0.7
C9orf3-219ENST00000488186 HLA-DQA1P01909 254 aa10.67□□□□□ -0.7
C9orf3-219ENST00000488186 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
C9orf3-219ENST00000488186 NFE4Q86UQ8 179 aa10.67□□□□□ -0.7
C9orf3-219ENST00000488186 GNB1LQ9BYB4 327 aa10.67□□□□□ -0.7
C9orf3-219ENST00000488186 KRTAP1-5Q9BYS1 174 aa10.67□□□□□ -0.7
C9orf3-219ENST00000488186 TRBV24-1A0A075B6N3 115 aa10.66□□□□□ -0.7
C9orf3-219ENST00000488186 TRBV27A0A0K0K1C4 114 aa10.66□□□□□ -0.7
C9orf3-219ENST00000488186 ATRAIDQ6UW56 229 aa10.66□□□□□ -0.7
C9orf3-219ENST00000488186 LINC00336Q6ZUF6 198 aa10.66□□□□□ -0.7
C9orf3-219ENST00000488186 DNAH2Q9P225 4427 aa10.66□□□□□ -0.7
C9orf3-219ENST00000488186 TGIF2-C20orf24A0A0A6YYL0 155 aa10.65□□□□□ -0.7
C9orf3-219ENST00000488186 IBA57-AS1B1ANH7 110 aa10.65□□□□□ -0.7
C9orf3-219ENST00000488186 NPYP01303 97 aa10.65□□□□□ -0.7
C9orf3-219ENST00000488186 Q8N3U1 123 aa10.65□□□□□ -0.7
C9orf3-219ENST00000488186 SMCO4Q9NRQ5 59 aa10.65□□□□□ -0.7
C9orf3-219ENST00000488186 LAMTOR2Q9Y2Q5 125 aa10.65□□□□□ -0.7
C9orf3-219ENST00000488186 FRAS1Q86XX4 4008 aa10.65□□□□□ -0.7
C9orf3-219ENST00000488186 TCAPO15273 167 aa10.64□□□□□ -0.71
C9orf3-219ENST00000488186 MT-ND6P03923 174 aa10.64□□□□□ -0.71
C9orf3-219ENST00000488186 ANGP03950 147 aaKnown RBP10.64□□□□□ -0.71
C9orf3-219ENST00000488186 FABP9Q0Z7S8 132 aa10.64□□□□□ -0.71
C9orf3-219ENST00000488186 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
C9orf3-219ENST00000488186 MAP1LC3AQ9H492 121 aa10.64□□□□□ -0.71
C9orf3-219ENST00000488186 Q9HAA7 133 aa10.64□□□□□ -0.71
C9orf3-219ENST00000488186 KLK12Q9UKR0 248 aa10.64□□□□□ -0.71
C9orf3-219ENST00000488186 TRAV8-3A0A0A6YYJ7 113 aa10.63□□□□□ -0.71
C9orf3-219ENST00000488186 LOC389332A0A1B0GUA5 103 aa10.63□□□□□ -0.71
C9orf3-219ENST00000488186 TSHBP01222 138 aa10.63□□□□□ -0.71
C9orf3-219ENST00000488186 RAB5AP20339 215 aa10.63□□□□□ -0.71
C9orf3-219ENST00000488186 KIAA1644Q3SXP7 199 aa10.63□□□□□ -0.71
C9orf3-219ENST00000488186 MPV17L2Q567V2 206 aa10.63□□□□□ -0.71
C9orf3-219ENST00000488186 SMIM2Q9BVW6 85 aa10.63□□□□□ -0.71
C9orf3-219ENST00000488186 MRPL18Q9H0U6 180 aaKnown RBP10.63□□□□□ -0.71
C9orf3-219ENST00000488186 DNAH17Q9UFH2 4485 aa10.62□□□□□ -0.71
C9orf3-219ENST00000488186 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-219ENST00000488186 IGKV2-29A2NJV5 120 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-219ENST00000488186 CRPP02741 224 aa10.62□□□□□ -0.71
C9orf3-219ENST00000488186 RBX1P62877 108 aa10.62□□□□□ -0.71
C9orf3-219ENST00000488186 RPL32P62910 135 aaKnown RBP10.62□□□□□ -0.71
C9orf3-219ENST00000488186 LAGE3Q14657 143 aa10.62□□□□□ -0.71
C9orf3-219ENST00000488186 RNASEKQ6P5S7 137 aaKnown RBP10.62□□□□□ -0.71
C9orf3-219ENST00000488186 Q8N976 141 aa10.62□□□□□ -0.71
C9orf3-219ENST00000488186 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
C9orf3-219ENST00000488186 TRAPPC1Q9Y5R8 145 aa10.62□□□□□ -0.71
C9orf3-219ENST00000488186 PRSS29PA6NIE9 313 aa10.61□□□□□ -0.71
C9orf3-219ENST00000488186 H7C423 109 aa10.61□□□□□ -0.71
C9orf3-219ENST00000488186 RTL8CO15255 209 aa10.61□□□□□ -0.71
C9orf3-219ENST00000488186 PSCAO43653 123 aa10.61□□□□□ -0.71
C9orf3-219ENST00000488186 SMAGPQ0VAQ4 97 aa10.61□□□□□ -0.71
C9orf3-219ENST00000488186 TMEM18Q96B42 140 aa10.61□□□□□ -0.71
C9orf3-219ENST00000488186 RMI2Q96E14 147 aa10.61□□□□□ -0.71
C9orf3-219ENST00000488186 TMEM101Q96IK0 257 aa10.61□□□□□ -0.71
C9orf3-219ENST00000488186 Q0VG73 95 aa10.6□□□□□ -0.71
C9orf3-219ENST00000488186 CBLN2Q8IUK8 224 aa10.6□□□□□ -0.71
C9orf3-219ENST00000488186 TM2D2Q9BX73 214 aa10.6□□□□□ -0.71
C9orf3-219ENST00000488186 FAT2Q9NYQ8 4349 aa10.59□□□□□ -0.71
C9orf3-219ENST00000488186 A0A1B0GUV1 79 aa10.59□□□□□ -0.71
C9orf3-219ENST00000488186 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
C9orf3-219ENST00000488186 PRSS47A8MTI9 375 aa10.58□□□□□ -0.72
C9orf3-219ENST00000488186 FGF6P10767 208 aa10.58□□□□□ -0.72
C9orf3-219ENST00000488186 ESDP10768 282 aa10.58□□□□□ -0.72
C9orf3-219ENST00000488186 LINC00269Q8N2A0 174 aa10.58□□□□□ -0.72
C9orf3-219ENST00000488186 IGKV2D-24A0A075B6R9 120 aa10.57□□□□□ -0.72
C9orf3-219ENST00000488186 ZNF25P17030 456 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-219ENST00000488186 Q8N8P6 123 aa10.57□□□□□ -0.72
C9orf3-219ENST00000488186 OR5A1Q8NGJ0 315 aa10.57□□□□□ -0.72
C9orf3-219ENST00000488186 PRSS3P2Q8NHM4 247 aa10.57□□□□□ -0.72
C9orf3-219ENST00000488186 NXT2Q9NPJ8 142 aaKnown RBP10.57□□□□□ -0.72
C9orf3-219ENST00000488186 COX11Q9Y6N1 276 aa10.57□□□□□ -0.72
C9orf3-219ENST00000488186 EPPK1P58107 5090 aaKnown RBP10.57□□□□□ -0.72
C9orf3-219ENST00000488186 IGLV4-60A0A075B6I1 120 aa10.56□□□□□ -0.72
C9orf3-219ENST00000488186 EREGO14944 169 aa10.56□□□□□ -0.72
C9orf3-219ENST00000488186 CLPSL2Q6UWE3 100 aa10.56□□□□□ -0.72
C9orf3-219ENST00000488186 ALKBH7Q9BT30 221 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-219ENST00000488186 C1orf43Q9BWL3 253 aa10.56□□□□□ -0.72
C9orf3-219ENST00000488186 REG3AQ06141 175 aa10.55□□□□□ -0.72
C9orf3-219ENST00000488186 MIAQ16674 131 aa10.55□□□□□ -0.72
C9orf3-219ENST00000488186 ENHOQ6UWT2 76 aa10.55□□□□□ -0.72
C9orf3-219ENST00000488186 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
C9orf3-219ENST00000488186 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
C9orf3-219ENST00000488186 IFI27P40305 119 aaPredicted RBP10.54□□□□□ -0.72
C9orf3-219ENST00000488186 TNP2Q05952 138 aa10.54□□□□□ -0.72
C9orf3-219ENST00000488186 ORMDL2Q53FV1 153 aa10.54□□□□□ -0.72
C9orf3-219ENST00000488186 YPEL4Q96NS1 127 aa10.54□□□□□ -0.72
C9orf3-219ENST00000488186 HECTD4Q9Y4D8 3996 aa10.53□□□□□ -0.72
C9orf3-219ENST00000488186 K7EMI3 77 aa10.53□□□□□ -0.72
C9orf3-219ENST00000488186 G0S2P27469 103 aa10.53□□□□□ -0.72
C9orf3-219ENST00000488186 Q6ZRN7 208 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-219ENST00000488186 MRPL52Q86TS9 123 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms