RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 FAM25CB3EWG5 89 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 FAM25GB3EWG6 89 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 CCL8P80075 99 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 SMCO1Q147U7 214 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 SMIM21Q3B7S5 101 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 Q5VSD8 79 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 Q6JHZ5 121 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 ZNF818PQ6ZRF7 136 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 SMIM4Q8WVI0 70 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 ANP32BQ92688 251 aaKnown RBP-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 PFDN5Q99471 154 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 PTPN13Q12923 2485 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 PARP14Q460N5 1801 aa-0.18□□□□□ -2.44
R3HDM1-219ENST00000488035 ERCC6L2Q5T890 1561 aa-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 ZNF609O15014 1411 aa-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 SIX6O95475 246 aa-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 TSPAN19P0C672 248 aa-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 SPRR1BP22528 89 aa-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 SPRR2DP22532 72 aa-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 GUCA1AP43080 201 aaPredicted RBP-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 CCL18P55774 89 aa-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 KLK9Q2XQG4 91 aa-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 FDCSPQ8NFU4 85 aa-0.19□□□□□ -2.44
R3HDM1-219ENST00000488035 NHSL1Q5SYE7 1610 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 MRC1P22897 1456 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 PIGBOS1A0A0B4J2F0 54 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 F8VRH5 84 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 GNG7O60262 68 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 ARPC4P59998 168 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 PIGYQ3MUY2 71 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 KRTAP19-7Q3SYF9 63 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 SCIMPQ6UWF3 145 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 BAGE2Q86Y30 109 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 TCEAL4Q96EI5 215 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 DPH3Q96FX2 82 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 SDF2Q99470 211 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 PKDREJQ9NTG1 2253 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 ADGRB1O14514 1584 aa-0.2□□□□□ -2.44
R3HDM1-219ENST00000488035 DAPK1P53355 1430 aa-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 PRG4Q92954 1404 aaPredicted RBP-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 IGLC7A0M8Q6 106 aa-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 MIF4GDA9UHW6 222 aaKnown RBP-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 UBA52P62987 128 aaKnown RBP-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 MEIG1Q5JSS6 88 aa-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 Q5VV11 94 aa-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 LSM10Q969L4 123 aaKnown RBP-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 FAM107BQ9H098 131 aa-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 TMEM191AQ9H0A3 160 aa-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 TMEM2Q9UHN6 1383 aa-0.21□□□□□ -2.44
R3HDM1-219ENST00000488035 CSMD3Q7Z407 3707 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 ZNF518AQ6AHZ1 1483 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 LOC105371267A0A1B0GV96 52 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 CHKB-CPT1BH3BT56 60 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 I3L2K1 104 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 UQCR11O14957 56 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 NCR2O95944 276 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 APOC3P02656 99 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 COX6B1P14854 86 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 COX17Q14061 63 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 SFTA2Q6UW10 78 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 Q8N8P6 123 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 COPS9Q8WXC6 57 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 NDUFA4L2Q9NRX3 87 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 CCDC167Q9P0B6 97 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 APLNQ9ULZ1 77 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 LENEPQ9Y5L5 61 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 SERP1Q9Y6X1 66 aa-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 PPRC1Q5VV67 1664 aaKnown RBP-0.22□□□□□ -2.44
R3HDM1-219ENST00000488035 FHAD1B1AJZ9 1412 aa-0.22□□□□□ -2.45
R3HDM1-219ENST00000488035 APC2O95996 2303 aa-0.22□□□□□ -2.45
R3HDM1-219ENST00000488035 NCOR1O75376 2440 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 BIVM-ERCC5R4GMW8 1640 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 ZNF292O60281 2723 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 SIPA1L3O60292 1781 aaPredicted RBP-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 TRBV7-3A0A075B6L6 115 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 SYS1-DBNDD2H3BUS1 97 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 HMGN4O00479 90 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 SFT2D2O95562 160 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 CATR1Q13166 79 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 DEFB105AQ8NG35 78 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 ARL11Q969Q4 196 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 DYNLRB1Q9NP97 96 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 FAIMQ9NVQ4 179 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 MAP1BP46821 2468 aaKnown RBP-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 PPIP5K1Q6PFW1 1433 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 POLA1P09884 1462 aaPredicted RBP-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 IFT140Q96RY7 1462 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 TENM4Q6N022 2769 aa-0.23□□□□□ -2.45
R3HDM1-219ENST00000488035 LRP6O75581 1613 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 IFT172Q9UG01 1749 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 MYH9P35579 1960 aaKnown RBP-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 CHD9Q3L8U1 2897 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 SPAARA0A1B0GVQ0 90 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 SPINK4O60575 86 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 SNAPC5O75971 98 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 ALX1Q15699 326 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 CCDC58Q4VC31 144 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 Q6AWC8 147 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 MRPL54Q6P161 138 aaKnown RBP-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 LCN9Q8WX39 176 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms