RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 DOCK11Q5JSL3 2073 aa1.71□□□□□ -2.13
USP48-209ENST00000487880 TRBV7-3A0A075B6L6 115 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 A0A1B0GUT8 65 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 C9JAW5 83 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 CCDC179H3BU77 68 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 K7EMI3 77 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 NPFFO15130 113 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 DPM2O94777 84 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 IGKCP01834 107 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 RBP4P02753 201 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 ORM1P02763 201 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 LGALS1P09382 135 aaKnown RBP1.71□□□□□ -2.14
USP48-209ENST00000487880 CRYGAP11844 174 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 CYBAP13498 195 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 HLA-DMBP28068 263 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 INSL3P51460 131 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 UBE2D1P51668 147 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 DIAPH2-AS1Q14236 149 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 FXYD3Q14802 87 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 PIGYQ3MUY2 71 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 DEFB121Q5J5C9 76 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 TEX36Q5VZQ5 186 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 MIC13Q5XKP0 118 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 RPS19BP1Q86WX3 136 aaKnown RBP1.71□□□□□ -2.14
USP48-209ENST00000487880 C15orf53Q8NAA6 179 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 SLC37A2Q8TED4 501 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 CARD19Q96LW7 228 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 ZNF714Q96N38 554 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 TRGV9Q99603 122 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 NABP2Q9BQ15 211 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 PRADC1Q9BSG0 188 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 NXT2Q9NPJ8 142 aaKnown RBP1.71□□□□□ -2.14
USP48-209ENST00000487880 HHLA3Q9XRX5 114 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 HIGD1AQ9Y241 93 aa1.71□□□□□ -2.14
USP48-209ENST00000487880 MED12LQ86YW9 2145 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 NCOA6Q14686 2063 aaPredicted RBP1.7□□□□□ -2.14
USP48-209ENST00000487880 DSCAML1Q8TD84 2053 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 TRAV12-1A0A0B4J245 112 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 F5H768 121 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 H3BT86 120 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 SPINK4O60575 86 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 STATHP02808 62 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 PLNP26678 52 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 FCER1GP30273 86 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 TMEM258P61165 79 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 HSPE1P61604 102 aaKnown RBP1.7□□□□□ -2.14
USP48-209ENST00000487880 UBE2L3P68036 154 aaKnown RBP1.7□□□□□ -2.14
USP48-209ENST00000487880 TMEM170BQ5T4T1 132 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 MIR17HGQ75NE6 70 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 FAM19A5Q7Z5A7 132 aaPredicted RBP1.7□□□□□ -2.14
USP48-209ENST00000487880 ALPK2Q86TB3 2170 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 OR1L8Q8NGR8 309 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 ZC2HC1AQ96GY0 325 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 FAM167A-AS1Q96KT0 104 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 NAA38Q9BRA0 125 aaKnown RBP1.7□□□□□ -2.14
USP48-209ENST00000487880 OR2H1Q9GZK4 316 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 ENY2Q9NPA8 101 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 TMEM14BQ9NUH8 114 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 PRNDQ9UKY0 176 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 EPDR1Q9UM22 224 aa1.7□□□□□ -2.14
USP48-209ENST00000487880 CHCHD2Q9Y6H1 151 aaPredicted RBP1.7□□□□□ -2.14
USP48-209ENST00000487880 SNRNP200O75643 2136 aaKnown RBP1.69□□□□□ -2.14
USP48-209ENST00000487880 IGHV3-73A0A0B4J1V6 119 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 TRAV2A0A0B4J234 112 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 TRAV4A0A0B4J268 109 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 TMEM30CPA0ZSE6 113 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 ATOX1O00244 68 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 LY6HO94772 140 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 CD7P09564 240 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 DEFA4P12838 97 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 COX7CP15954 63 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 SLC25A16P16260 332 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 GLRXP35754 106 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 EMP1P54849 157 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 HERVK_113P63121 156 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 PLGLAQ15195 96 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 NNATQ16517 81 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 C9orf153Q5TBE3 101 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 C10orf126Q8N4M7 172 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 ANKRD29Q8N6D5 301 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 TMEM75Q8N9X5 138 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 COPS9Q8WXC6 57 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 Q9BRP9 147 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 CNFNQ9BYD5 112 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 TMEM14CQ9P0S9 112 aa1.69□□□□□ -2.14
USP48-209ENST00000487880 MUC22E2RYF6 1773 aaPredicted RBP1.69□□□□□ -2.14
USP48-209ENST00000487880 ARHGAP32A7KAX9 2087 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 MYOFQ9NZM1 2061 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 IGKV2D-26A0A0A0MRZ7 120 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.68□□□□□ -2.14
USP48-209ENST00000487880 TRAV17A0A0B4J275 112 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 A0A0G2JQZ4 141 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 TRBV30A0A0K0K1B3 111 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 TRBV10-2A0A0K0K1G8 114 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 F8VRH5 84 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 K7ERJ3 54 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 TCL1BO95988 128 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 TCRAP04437 139 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 IGLC6P0CF74 106 aa1.68□□□□□ -2.14
USP48-209ENST00000487880 LINC00694P0DN24 101 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms