RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 C14orf132Q9NPU4 83 aa11.45□□□□□ -0.58
HLA-DQB1-209ENST00000487676 RBM3P98179 157 aaKnown RBP11.44□□□□□ -0.58
HLA-DQB1-209ENST00000487676 PYGO1Q9Y3Y4 419 aa11.44□□□□□ -0.58
HLA-DQB1-209ENST00000487676 MUC6Q6W4X9 2439 aa11.44□□□□□ -0.58
HLA-DQB1-209ENST00000487676 IGHG2P01859 326 aa11.44□□□□□ -0.58
HLA-DQB1-209ENST00000487676 RPL18AQ02543 176 aaKnown RBP11.44□□□□□ -0.58
HLA-DQB1-209ENST00000487676 TRBV7-7A0A0K0K1E9 115 aa11.44□□□□□ -0.58
HLA-DQB1-209ENST00000487676 F8W735 103 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB1-209ENST00000487676 C2CD3Q4AC94 2353 aa11.43□□□□□ -0.58
HLA-DQB1-209ENST00000487676 CRYGDP07320 174 aa11.43□□□□□ -0.58
HLA-DQB1-209ENST00000487676 CDKN2A-AS1Q9UH64 79 aa11.43□□□□□ -0.58
HLA-DQB1-209ENST00000487676 LECT2O14960 151 aa11.43□□□□□ -0.58
HLA-DQB1-209ENST00000487676 LINC01548A6NM66 108 aa11.42□□□□□ -0.58
HLA-DQB1-209ENST00000487676 NRGNQ92686 78 aa11.42□□□□□ -0.58
HLA-DQB1-209ENST00000487676 K7EMT4 169 aa11.42□□□□□ -0.58
HLA-DQB1-209ENST00000487676 NDUFA1O15239 70 aa11.42□□□□□ -0.58
HLA-DQB1-209ENST00000487676 TSHBP01222 138 aa11.42□□□□□ -0.58
HLA-DQB1-209ENST00000487676 FHL3Q13643 280 aa11.42□□□□□ -0.58
HLA-DQB1-209ENST00000487676 TRBV12-3P01733 135 aa11.41□□□□□ -0.58
HLA-DQB1-209ENST00000487676 UBE2E2Q96LR5 201 aa11.41□□□□□ -0.58
HLA-DQB1-209ENST00000487676 CCL19Q99731 98 aa11.41□□□□□ -0.58
HLA-DQB1-209ENST00000487676 CLPSL1A2RUU4 121 aa11.41□□□□□ -0.58
HLA-DQB1-209ENST00000487676 JMJD7-PLA2G4BH0Y9G9 81 aa11.41□□□□□ -0.58
HLA-DQB1-209ENST00000487676 CSDC2Q9Y534 153 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB1-209ENST00000487676 PSMB8P28062 276 aa11.41□□□□□ -0.58
HLA-DQB1-209ENST00000487676 FAM19A5Q7Z5A7 132 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-209ENST00000487676 TIRAPP58753 221 aa11.4□□□□□ -0.58
HLA-DQB1-209ENST00000487676 SONP18583 2426 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-209ENST00000487676 SPG11Q96JI7 2443 aa11.4□□□□□ -0.58
HLA-DQB1-209ENST00000487676 ZFHX2Q9C0A1 2572 aaPredicted RBP11.4□□□□□ -0.59
HLA-DQB1-209ENST00000487676 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
HLA-DQB1-209ENST00000487676 Q8N6K4 173 aa11.39□□□□□ -0.59
HLA-DQB1-209ENST00000487676 NXPH4O95158 308 aa11.39□□□□□ -0.59
HLA-DQB1-209ENST00000487676 XCL2Q9UBD3 114 aa11.39□□□□□ -0.59
HLA-DQB1-209ENST00000487676 A8MZ25 164 aa11.39□□□□□ -0.59
HLA-DQB1-209ENST00000487676 MRPS36P82909 103 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB1-209ENST00000487676 SIRPDQ9H106 197 aa11.38□□□□□ -0.59
HLA-DQB1-209ENST00000487676 SORL1Q92673 2214 aa11.38□□□□□ -0.59
HLA-DQB1-209ENST00000487676 USP17L23D6RBM5 183 aa11.38□□□□□ -0.59
HLA-DQB1-209ENST00000487676 MIR7-3HGQ8N6C7 128 aa11.38□□□□□ -0.59
HLA-DQB1-209ENST00000487676 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
HLA-DQB1-209ENST00000487676 SS18Q15532 418 aa11.38□□□□□ -0.59
HLA-DQB1-209ENST00000487676 U3KQE9 123 aa11.38□□□□□ -0.59
HLA-DQB1-209ENST00000487676 NHLRC4P0CG21 123 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQB1-209ENST00000487676 C20orf197Q8N268 126 aa11.37□□□□□ -0.59
HLA-DQB1-209ENST00000487676 LOC107984640A0A0U1RRK4 108 aa11.36□□□□□ -0.59
HLA-DQB1-209ENST00000487676 COX7B2Q8TF08 81 aa11.36□□□□□ -0.59
HLA-DQB1-209ENST00000487676 DSCR8Q96T75 97 aa11.36□□□□□ -0.59
HLA-DQB1-209ENST00000487676 KLLNB2CW77 178 aa11.36□□□□□ -0.59
HLA-DQB1-209ENST00000487676 NDUFC2O95298 119 aa11.36□□□□□ -0.59
HLA-DQB1-209ENST00000487676 TRAV23DV6A0A075B6W5 121 aa11.36□□□□□ -0.59
HLA-DQB1-209ENST00000487676 KLK5Q9Y337 293 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQB1-209ENST00000487676 GRNP28799 593 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB1-209ENST00000487676 F5H768 121 aa11.35□□□□□ -0.59
HLA-DQB1-209ENST00000487676 FAM236DA0A1B0GTK5 79 aa11.35□□□□□ -0.59
HLA-DQB1-209ENST00000487676 FAM236CP0DP71 79 aa11.35□□□□□ -0.59
HLA-DQB1-209ENST00000487676 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
HLA-DQB1-209ENST00000487676 CITED2Q99967 270 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB1-209ENST00000487676 PIEZO1Q92508 2521 aa11.35□□□□□ -0.59
HLA-DQB1-209ENST00000487676 LINC00467Q9BRT7 94 aa11.34□□□□□ -0.59
HLA-DQB1-209ENST00000487676 ATP5EP2Q5VTU8 51 aa11.34□□□□□ -0.59
HLA-DQB1-209ENST00000487676 Q6ZSV7 163 aa11.34□□□□□ -0.59
HLA-DQB1-209ENST00000487676 ADAMTSL4-AS1Q5T5F5 129 aa11.34□□□□□ -0.59
HLA-DQB1-209ENST00000487676 PIP4P1Q86T03 277 aa11.34□□□□□ -0.59
HLA-DQB1-209ENST00000487676 BLCAPP62952 87 aa11.33□□□□□ -0.6
HLA-DQB1-209ENST00000487676 C9orf85Q96MD7 179 aa11.33□□□□□ -0.6
HLA-DQB1-209ENST00000487676 PRRC2AP48634 2157 aaKnown RBP11.33□□□□□ -0.6
HLA-DQB1-209ENST00000487676 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
HLA-DQB1-209ENST00000487676 FAM222AQ5U5X8 452 aa11.32□□□□□ -0.6
HLA-DQB1-209ENST00000487676 Q6JHZ5 121 aa11.32□□□□□ -0.6
HLA-DQB1-209ENST00000487676 B4DSR2 109 aa11.32□□□□□ -0.6
HLA-DQB1-209ENST00000487676 MRAPQ8TCY5 172 aa11.32□□□□□ -0.6
HLA-DQB1-209ENST00000487676 ZNF580Q9UK33 172 aa11.32□□□□□ -0.6
HLA-DQB1-209ENST00000487676 PIK3CD-AS1Q5SR53 167 aa11.31□□□□□ -0.6
HLA-DQB1-209ENST00000487676 TMEM256-PLSCR3K7ERE1 68 aa11.31□□□□□ -0.6
HLA-DQB1-209ENST00000487676 ELANEP08246 267 aa11.31□□□□□ -0.6
HLA-DQB1-209ENST00000487676 C5orf38Q86SI9 138 aa11.31□□□□□ -0.6
HLA-DQB1-209ENST00000487676 C10orf105Q8TEF2 133 aa11.3□□□□□ -0.6
HLA-DQB1-209ENST00000487676 RAI1Q7Z5J4 1906 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB1-209ENST00000487676 LY6DQ14210 128 aa11.29□□□□□ -0.6
HLA-DQB1-209ENST00000487676 HRCT1Q6UXD1 115 aa11.29□□□□□ -0.6
HLA-DQB1-209ENST00000487676 CMC4P56277 68 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB1-209ENST00000487676 TECTAO75443 2155 aa11.29□□□□□ -0.6
HLA-DQB1-209ENST00000487676 MSMBP08118 114 aa11.29□□□□□ -0.6
HLA-DQB1-209ENST00000487676 IGF2-ASQ6U949 168 aa11.29□□□□□ -0.6
HLA-DQB1-209ENST00000487676 WNK1Q9H4A3 2382 aa11.29□□□□□ -0.6
HLA-DQB1-209ENST00000487676 K7EQD1 137 aa11.28□□□□□ -0.6
HLA-DQB1-209ENST00000487676 UPK3BQ9BT76 320 aa11.28□□□□□ -0.6
HLA-DQB1-209ENST00000487676 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
HLA-DQB1-209ENST00000487676 NCR3O14931 201 aa11.28□□□□□ -0.6
HLA-DQB1-209ENST00000487676 CFHR3Q02985 330 aa11.28□□□□□ -0.6
HLA-DQB1-209ENST00000487676 KIF25-AS1Q9Y6Z4 181 aa11.28□□□□□ -0.6
HLA-DQB1-209ENST00000487676 CSPG4Q6UVK1 2322 aa11.27□□□□□ -0.6
HLA-DQB1-209ENST00000487676 AMELXQ99217 191 aa11.27□□□□□ -0.6
HLA-DQB1-209ENST00000487676 K7EQG2 157 aa11.27□□□□□ -0.61
HLA-DQB1-209ENST00000487676 RPS28P62857 69 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB1-209ENST00000487676 PROK1P58294 105 aa11.26□□□□□ -0.61
HLA-DQB1-209ENST00000487676 CRYGAP11844 174 aa11.26□□□□□ -0.61
HLA-DQB1-209ENST00000487676 ENHOQ6UWT2 76 aa11.26□□□□□ -0.61
HLA-DQB1-209ENST00000487676 TRBV10-1A0A0K0K1A3 114 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms