RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 BRK1Q8WUW1 75 aa-2.18□□□□□ -2.76
RBM39-234ENST00000487604 MT1LQ93083 61 aa-2.18□□□□□ -2.76
RBM39-234ENST00000487604 BORCS8Q96FH0 119 aa-2.18□□□□□ -2.76
RBM39-234ENST00000487604 LAMTOR3Q9UHA4 124 aa-2.18□□□□□ -2.76
RBM39-234ENST00000487604 NDUFAF1Q9Y375 327 aa-2.18□□□□□ -2.76
RBM39-234ENST00000487604 KIF13AQ9H1H9 1805 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 SPTAN1Q13813 2472 aaKnown RBP-2.19□□□□□ -2.76
RBM39-234ENST00000487604 ANKRD31Q8N7Z5 1873 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 TRAV12-3A0A0B4J271 114 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 IGHV1-24A0A0C4DH33 117 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 MT2AP02795 61 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 CSN2P05814 226 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 PPP1R2P41236 205 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 UBE2D3P61077 147 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 UBE2D2P62837 147 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 BLCAPP62952 87 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 SPCS2Q15005 226 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 HRCT1Q6UXD1 115 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 AP3S1Q92572 193 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 ARL2BPQ9Y2Y0 163 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 S4R3F8 94 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 PAPPA2Q9BXP8 1791 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 ARFGEF1Q9Y6D6 1849 aa-2.19□□□□□ -2.76
RBM39-234ENST00000487604 LRRC37A2A6NM11 1700 aa-2.2□□□□□ -2.76
RBM39-234ENST00000487604 FER1L6Q2WGJ9 1857 aa-2.2□□□□□ -2.76
RBM39-234ENST00000487604 ADGRG4Q8IZF6 3080 aa-2.2□□□□□ -2.76
RBM39-234ENST00000487604 BOD1L1Q8NFC6 3051 aa-2.2□□□□□ -2.76
RBM39-234ENST00000487604 FAM92AA1XBS5 289 aa-2.2□□□□□ -2.76
RBM39-234ENST00000487604 RGS21Q2M5E4 152 aa-2.2□□□□□ -2.76
RBM39-234ENST00000487604 DEFB110Q30KQ9 67 aa-2.2□□□□□ -2.76
RBM39-234ENST00000487604 C9orf116Q5BN46 136 aaPredicted RBP-2.2□□□□□ -2.76
RBM39-234ENST00000487604 OTOSQ8NHW6 89 aa-2.2□□□□□ -2.76
RBM39-234ENST00000487604 SS18L2Q9UHA2 77 aa-2.2□□□□□ -2.76
RBM39-234ENST00000487604 LINC00959A0A1B0GUT2 108 aa-2.21□□□□□ -2.76
RBM39-234ENST00000487604 NIPSNAP2O75323 286 aa-2.21□□□□□ -2.76
RBM39-234ENST00000487604 ATG12O94817 140 aa-2.21□□□□□ -2.76
RBM39-234ENST00000487604 SMR3BP02814 79 aaPredicted RBP-2.21□□□□□ -2.76
RBM39-234ENST00000487604 SLC25A26Q70HW3 274 aa-2.21□□□□□ -2.76
RBM39-234ENST00000487604 CROCCP2Q86T23 111 aa-2.21□□□□□ -2.76
RBM39-234ENST00000487604 PHB2Q99623 299 aa-2.21□□□□□ -2.76
RBM39-234ENST00000487604 CICQ96RK0 1608 aaPredicted RBP-2.21□□□□□ -2.76
RBM39-234ENST00000487604 POLA1P09884 1462 aaPredicted RBP-2.21□□□□□ -2.76
RBM39-234ENST00000487604 MAP3K1Q13233 1512 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 FMN2Q9NZ56 1722 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 TRBV7-4A0A0J9YYF1 115 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 SMIM6P0DI80 62 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 CKS2P33552 79 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 CCL18P55774 89 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 RPL19P84098 196 aaKnown RBP-2.22□□□□□ -2.76
RBM39-234ENST00000487604 LTC4SQ16873 150 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 OR51A4Q8NGJ6 313 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 SMIM4Q8WVI0 70 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 USMG5Q96IX5 58 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 ERG28Q9UKR5 140 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 CAMSAP1Q5T5Y3 1602 aa-2.22□□□□□ -2.76
RBM39-234ENST00000487604 SBF2Q86WG5 1849 aa-2.23□□□□□ -2.77
RBM39-234ENST00000487604 TRAV2A0A0B4J234 112 aa-2.23□□□□□ -2.77
RBM39-234ENST00000487604 F8VRH5 84 aa-2.23□□□□□ -2.77
RBM39-234ENST00000487604 ALX1Q15699 326 aa-2.23□□□□□ -2.77
RBM39-234ENST00000487604 LELP1Q5T871 98 aa-2.23□□□□□ -2.77
RBM39-234ENST00000487604 SNX29P2Q8IUI4 249 aa-2.23□□□□□ -2.77
RBM39-234ENST00000487604 SELENOSQ9BQE4 189 aa-2.23□□□□□ -2.77
RBM39-234ENST00000487604 KNDC1Q76NI1 1749 aa-2.23□□□□□ -2.77
RBM39-234ENST00000487604 MYOM3Q5VTT5 1437 aa-2.24□□□□□ -2.77
RBM39-234ENST00000487604 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.24□□□□□ -2.77
RBM39-234ENST00000487604 M0R135 149 aa-2.24□□□□□ -2.77
RBM39-234ENST00000487604 PIPP12273 146 aaPredicted RBP-2.24□□□□□ -2.77
RBM39-234ENST00000487604 UBE2D1P51668 147 aa-2.24□□□□□ -2.77
RBM39-234ENST00000487604 TAS2R8Q9NYW2 309 aa-2.24□□□□□ -2.77
RBM39-234ENST00000487604 CCDC171Q6TFL3 1326 aa-2.24□□□□□ -2.77
RBM39-234ENST00000487604 PARP14Q460N5 1801 aa-2.25□□□□□ -2.77
RBM39-234ENST00000487604 ZNF236Q9UL36 1845 aa-2.25□□□□□ -2.77
RBM39-234ENST00000487604 TRBV27A0A0K0K1C4 114 aa-2.25□□□□□ -2.77
RBM39-234ENST00000487604 MAP1LC3B2A6NCE7 125 aa-2.25□□□□□ -2.77
RBM39-234ENST00000487604 MRPS15P82914 257 aaKnown RBP-2.25□□□□□ -2.77
RBM39-234ENST00000487604 TMEM170BQ5T4T1 132 aa-2.25□□□□□ -2.77
RBM39-234ENST00000487604 CRIPTQ9P021 101 aa-2.25□□□□□ -2.77
RBM39-234ENST00000487604 TECPR2O15040 1411 aa-2.25□□□□□ -2.77
RBM39-234ENST00000487604 TRDV1A0A1B0GX56 115 aa-2.26□□□□□ -2.77
RBM39-234ENST00000487604 PIRTP0C851 137 aa-2.26□□□□□ -2.77
RBM39-234ENST00000487604 DYNLRB2Q8TF09 96 aa-2.26□□□□□ -2.77
RBM39-234ENST00000487604 COL14A1Q05707 1796 aaKnown RBP-2.27□□□□□ -2.77
RBM39-234ENST00000487604 CTXND1A0A1B0GTU2 59 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 GABARAPH6UMI1 98 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 SSSCA1O60232 199 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 E2F6O75461 281 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 CRYBA4P53673 196 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 VSTM2AQ8TAG5 236 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 C10orf82Q8WW14 230 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 GINS3Q9BRX5 216 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 NDUFA4L2Q9NRX3 87 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 MYH2Q9UKX2 1941 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 NKTRP30414 1462 aaKnown RBP-2.27□□□□□ -2.77
RBM39-234ENST00000487604 ARHGEF12Q9NZN5 1544 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 SETBP1Q9Y6X0 1596 aa-2.27□□□□□ -2.77
RBM39-234ENST00000487604 CSMD2Q7Z408 3487 aa-2.28□□□□□ -2.77
RBM39-234ENST00000487604 CCDC179H3BU77 68 aa-2.28□□□□□ -2.77
RBM39-234ENST00000487604 PGRMC1O00264 195 aaKnown RBP-2.28□□□□□ -2.77
RBM39-234ENST00000487604 ARPC5O15511 151 aa-2.28□□□□□ -2.77
RBM39-234ENST00000487604 HBDP02042 147 aa-2.28□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms