RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	DNAJC30	Q96LL9	226 aa		5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565	MAP1LC3A	Q9H492	121 aa		5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565	ST20	Q9HBF5	79 aa		5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565	NIT2	Q9NQR4	276 aa		5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565	KLK5	Q9Y337	293 aa	Predicted RBP	5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565	TRBV7-3	A0A075B6L6	115 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	TRBV6-5	A0A0K0K1A5	114 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	IGLL5	B9A064	214 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	GAS8-AS1	O95177	125 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	TNFRSF6B	O95407	300 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	TRGC2	P03986	189 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	LINC00694	P0DN24	101 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	PMCH	P20382	165 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	SUMO2	P61956	95 aa	Known RBP	5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	MRPL23	Q16540	153 aa	Known RBP	5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	ZFAND6	Q6FIF0	208 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	SH2D6	Q7Z4S9	175 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	C15orf53	Q8NAA6	179 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	ZNRF2	Q8NHG8	242 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	MUC7	Q8TAX7	377 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	VSIG2	Q96IQ7	327 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	C20orf78	Q9BR46	151 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	SMIM2	Q9BVW6	85 aa		5.33	□□□□□ -1.56
GARNL3-218	ENST00000487565	NACA	E9PAV3	2078 aa		5.32	□□□□□ -1.56
GARNL3-218	ENST00000487565	SDHAF1	A6NFY7	115 aa		5.32	□□□□□ -1.56
GARNL3-218	ENST00000487565	C1orf196	B1AJZ1	125 aa		5.32	□□□□□ -1.56
GARNL3-218	ENST00000487565	NPS	P0C0P6	89 aa		5.32	□□□□□ -1.56
GARNL3-218	ENST00000487565	UBE2D3	P61077	147 aa		5.32	□□□□□ -1.56
GARNL3-218	ENST00000487565	UBE2D2	P62837	147 aa		5.32	□□□□□ -1.56
GARNL3-218	ENST00000487565	NEGR1	Q7Z3B1	354 aa		5.32	□□□□□ -1.56
GARNL3-218	ENST00000487565	TMEM70	Q9BUB7	260 aa		5.32	□□□□□ -1.56
GARNL3-218	ENST00000487565	DNAH7	Q8WXX0	4024 aa		5.32	□□□□□ -1.56
GARNL3-218	ENST00000487565		A0A096LPF7	62 aa		5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565	IGHV3-38	A0A0C4DH36	116 aa		5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565	LOC389332	A0A1B0GUA5	103 aa		5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565	FCER1G	P30273	86 aa		5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565	RPL32	P62910	135 aa	Known RBP	5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565	COTL1	Q14019	142 aa		5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565	DAZ4	Q86SG3	579 aa	Known RBP	5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565	ATP6V0E2	Q8NHE4	81 aa		5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565	DAZ3	Q9NR90	486 aa	Known RBP	5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565		Q9UF83	564 aa		5.31	□□□□□ -1.56
GARNL3-218	ENST00000487565		I3L3M4	83 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	VCY	O14598	125 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	AMT	P48728	403 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	TCTA	P57738	103 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	RAB5B	P61020	215 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	IQCJ	Q1A5X6	159 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	TMEM97	Q5BJF2	176 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	FA2H	Q7L5A8	372 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	C18orf32	Q8TCD1	76 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	KIR2DL4	Q99706	377 aa		5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	NXT2	Q9NPJ8	142 aa	Known RBP	5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.3	□□□□□ -1.56
GARNL3-218	ENST00000487565	TRBV27	A0A0K0K1C4	114 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	TCAP	O15273	167 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST1H2BK	O60814	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST1H2BJ	P06899	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST1H2BO	P23527	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST1H2BB	P33778	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	POLR2K	P53803	58 aa	Known RBP	5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST1H2BD	P58876	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST1H2BC	P62807	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST2H2BE	Q16778	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	RNASEK	Q6P5S7	137 aa	Known RBP	5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	BAGE3	Q86Y29	109 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565		Q8N8P6	123 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	PRSS3P2	Q8NHM4	247 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST1H2BH	Q93079	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST1H2BN	Q99877	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	HIST1H2BM	Q99879	126 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	GTSF1L	Q9H1H1	148 aa		5.29	□□□□□ -1.56
GARNL3-218	ENST00000487565	TRBV25-1	A0A075B6N4	114 aa		5.28	□□□□□ -1.56
GARNL3-218	ENST00000487565	IGHV1-24	A0A0C4DH33	117 aa		5.28	□□□□□ -1.56
GARNL3-218	ENST00000487565	C3orf84	H3BNL1	204 aa		5.28	□□□□□ -1.56
GARNL3-218	ENST00000487565	TSHB	P01222	138 aa		5.28	□□□□□ -1.56
GARNL3-218	ENST00000487565	IFI27	P40305	119 aa	Predicted RBP	5.28	□□□□□ -1.56
GARNL3-218	ENST00000487565	TIRAP	P58753	221 aa		5.28	□□□□□ -1.56
GARNL3-218	ENST00000487565	UBE2DNL	Q8IWF7	75 aa		5.28	□□□□□ -1.56
GARNL3-218	ENST00000487565	DEFB104A	Q8WTQ1	72 aa		5.28	□□□□□ -1.56
GARNL3-218	ENST00000487565	TMEM243	Q9BU79	118 aa		5.28	□□□□□ -1.56
GARNL3-218	ENST00000487565	IGLV2-18	A0A075B6J9	118 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	TRBV6-8	A0A0A6YYG3	113 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	TRAV8-6	A0A0B4J262	113 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	PRSS47	A8MTI9	375 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565		K7EMI3	77 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	UBE2L6	O14933	153 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	CCL18	P55774	89 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565		Q0VG73	95 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	ORMDL2	Q53FV1	153 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	LELP1	Q5T871	98 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	CHCHD5	Q9BSY4	110 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	STARD9	Q9P2P6	4700 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	APLN	Q9ULZ1	77 aa		5.27	□□□□□ -1.57
GARNL3-218	ENST00000487565	SERF1A	O75920	110 aa		5.26	□□□□□ -1.57
GARNL3-218	ENST00000487565	PKIA	P61925	76 aa		5.26	□□□□□ -1.57
GARNL3-218	ENST00000487565	LAGE3	Q14657	143 aa		5.26	□□□□□ -1.57

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