RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CCL20P78556 96 aa12.27□□□□□ -0.45
SMPDL3A-202ENST00000487215 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.45
SMPDL3A-202ENST00000487215 IGLV4-60A0A075B6I1 120 aa12.26□□□□□ -0.45
SMPDL3A-202ENST00000487215 MGPP08493 103 aa12.26□□□□□ -0.45
SMPDL3A-202ENST00000487215 IGLC6P0CF74 106 aa12.26□□□□□ -0.45
SMPDL3A-202ENST00000487215 ODF1Q14990 250 aa12.26□□□□□ -0.45
SMPDL3A-202ENST00000487215 C7orf33Q8WU49 177 aa12.26□□□□□ -0.45
SMPDL3A-202ENST00000487215 LINC01600Q96MT4 127 aa12.26□□□□□ -0.45
SMPDL3A-202ENST00000487215 M0QY20 66 aa12.25□□□□□ -0.45
SMPDL3A-202ENST00000487215 TRGC1P0CF51 173 aa12.25□□□□□ -0.45
SMPDL3A-202ENST00000487215 MEF2BQ02080 365 aaPredicted RBP12.25□□□□□ -0.45
SMPDL3A-202ENST00000487215 A0A1B0GUV1 79 aa12.24□□□□□ -0.45
SMPDL3A-202ENST00000487215 C19orf71A6NCJ1 209 aa12.24□□□□□ -0.45
SMPDL3A-202ENST00000487215 GZMBP10144 247 aa12.24□□□□□ -0.45
SMPDL3A-202ENST00000487215 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
SMPDL3A-202ENST00000487215 TAGLN2P37802 199 aaKnown RBP12.23□□□□□ -0.45
SMPDL3A-202ENST00000487215 SULT1A2P50226 295 aa12.23□□□□□ -0.45
SMPDL3A-202ENST00000487215 SUMO4Q6EEV6 95 aa12.23□□□□□ -0.45
SMPDL3A-202ENST00000487215 MED9Q9NWA0 146 aa12.23□□□□□ -0.45
SMPDL3A-202ENST00000487215 RAB19A4D1S5 217 aa12.22□□□□□ -0.45
SMPDL3A-202ENST00000487215 COX6A2Q02221 97 aa12.22□□□□□ -0.45
SMPDL3A-202ENST00000487215 WDR73Q6P4I2 378 aa12.22□□□□□ -0.45
SMPDL3A-202ENST00000487215 RASL11AQ6T310 242 aa12.22□□□□□ -0.45
SMPDL3A-202ENST00000487215 C15orf56Q8N910 161 aa12.22□□□□□ -0.45
SMPDL3A-202ENST00000487215 NKX2-5P52952 324 aaPredicted RBP12.21□□□□□ -0.45
SMPDL3A-202ENST00000487215 PRR3P79522 188 aaKnown RBP12.21□□□□□ -0.45
SMPDL3A-202ENST00000487215 GTSF1Q8WW33 167 aa12.2□□□□□ -0.46
SMPDL3A-202ENST00000487215 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
SMPDL3A-202ENST00000487215 NIT2Q9NQR4 276 aa12.2□□□□□ -0.46
SMPDL3A-202ENST00000487215 BCL2P10415 239 aa12.19□□□□□ -0.46
SMPDL3A-202ENST00000487215 MAJINQ3KP22 176 aa12.19□□□□□ -0.46
SMPDL3A-202ENST00000487215 LYZL1Q6UWQ5 148 aa12.19□□□□□ -0.46
SMPDL3A-202ENST00000487215 C9orf62Q8N4C0 152 aa12.19□□□□□ -0.46
SMPDL3A-202ENST00000487215 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
SMPDL3A-202ENST00000487215 IGKV2-24A0A0C4DH68 120 aa12.18□□□□□ -0.46
SMPDL3A-202ENST00000487215 A0A0J9YXV3 536 aa12.18□□□□□ -0.46
SMPDL3A-202ENST00000487215 GAGE12HA6NDE8 117 aa12.18□□□□□ -0.46
SMPDL3A-202ENST00000487215 UBE2L6O14933 153 aa12.18□□□□□ -0.46
SMPDL3A-202ENST00000487215 NDUFS6O75380 124 aaKnown RBP12.18□□□□□ -0.46
SMPDL3A-202ENST00000487215 NTF3P20783 257 aa12.18□□□□□ -0.46
SMPDL3A-202ENST00000487215 RPS10P46783 165 aaKnown RBP12.18□□□□□ -0.46
SMPDL3A-202ENST00000487215 SLC51BQ86UW2 128 aa12.18□□□□□ -0.46
SMPDL3A-202ENST00000487215 HIGD2BQ4VC39 106 aa12.17□□□□□ -0.46
SMPDL3A-202ENST00000487215 CFAP161Q6P656 301 aa12.17□□□□□ -0.46
SMPDL3A-202ENST00000487215 TCTE3Q8IZS6 198 aa12.17□□□□□ -0.46
SMPDL3A-202ENST00000487215 STPG4Q8N801 248 aa12.17□□□□□ -0.46
SMPDL3A-202ENST00000487215 CTRLP40313 264 aa12.16□□□□□ -0.46
SMPDL3A-202ENST00000487215 COTL1Q14019 142 aa12.16□□□□□ -0.46
SMPDL3A-202ENST00000487215 NUDT10Q8NFP7 164 aa12.16□□□□□ -0.46
SMPDL3A-202ENST00000487215 NUDT11Q96G61 164 aa12.16□□□□□ -0.46
SMPDL3A-202ENST00000487215 TRBV20OR9-2A0A075B6H5 130 aa12.15□□□□□ -0.46
SMPDL3A-202ENST00000487215 AMTP48728 403 aa12.15□□□□□ -0.46
SMPDL3A-202ENST00000487215 KRTAP10-8P60410 259 aa12.15□□□□□ -0.46
SMPDL3A-202ENST00000487215 TWIST1Q15672 202 aa12.15□□□□□ -0.46
SMPDL3A-202ENST00000487215 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.46
SMPDL3A-202ENST00000487215 LYPD6BQ8NI32 183 aa12.15□□□□□ -0.46
SMPDL3A-202ENST00000487215 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
SMPDL3A-202ENST00000487215 IGKV3OR2-268A0A0C4DH90 116 aa12.14□□□□□ -0.47
SMPDL3A-202ENST00000487215 RPP21Q9H633 154 aaKnown RBP12.14□□□□□ -0.47
SMPDL3A-202ENST00000487215 A0A096LNI7 61 aa12.12□□□□□ -0.47
SMPDL3A-202ENST00000487215 TEX261Q6UWH6 196 aa12.12□□□□□ -0.47
SMPDL3A-202ENST00000487215 SPINK6Q6UWN8 80 aa12.12□□□□□ -0.47
SMPDL3A-202ENST00000487215 GVQW2A0A096LPI5 108 aaPredicted RBP12.11□□□□□ -0.47
SMPDL3A-202ENST00000487215 REG3GQ6UW15 175 aa12.11□□□□□ -0.47
SMPDL3A-202ENST00000487215 CHCHD10Q8WYQ3 142 aaPredicted RBP12.11□□□□□ -0.47
SMPDL3A-202ENST00000487215 NCR2O95944 276 aa12.1□□□□□ -0.47
SMPDL3A-202ENST00000487215 OCC1Q8TAD7 63 aa12.1□□□□□ -0.47
SMPDL3A-202ENST00000487215 GATD1Q8NB37 220 aa12.09□□□□□ -0.47
SMPDL3A-202ENST00000487215 RNASE7Q9H1E1 156 aaKnown RBP12.09□□□□□ -0.47
SMPDL3A-202ENST00000487215 TMEM250H0YL14 139 aa12.08□□□□□ -0.48
SMPDL3A-202ENST00000487215 H7C423 109 aa12.08□□□□□ -0.48
SMPDL3A-202ENST00000487215 BLOC1S1P78537 153 aa12.08□□□□□ -0.48
SMPDL3A-202ENST00000487215 AMMECR1LQ6DCA0 310 aa12.08□□□□□ -0.48
SMPDL3A-202ENST00000487215 K7EN84 100 aa12.07□□□□□ -0.48
SMPDL3A-202ENST00000487215 GAS8-AS1O95177 125 aa12.07□□□□□ -0.48
SMPDL3A-202ENST00000487215 SRSF9Q13242 221 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMPDL3A-202ENST00000487215 A8MWL6 223 aa12.06□□□□□ -0.48
SMPDL3A-202ENST00000487215 FOXI1Q12951 378 aa12.06□□□□□ -0.48
SMPDL3A-202ENST00000487215 LINC00474Q9P2X8 69 aa12.06□□□□□ -0.48
SMPDL3A-202ENST00000487215 TRAV26-2A0A0B4J265 109 aa12.05□□□□□ -0.48
SMPDL3A-202ENST00000487215 GATCO43716 136 aaKnown RBP12.05□□□□□ -0.48
SMPDL3A-202ENST00000487215 APCSP02743 223 aa12.05□□□□□ -0.48
SMPDL3A-202ENST00000487215 RNASEKQ6P5S7 137 aaKnown RBP12.05□□□□□ -0.48
SMPDL3A-202ENST00000487215 Q6ZNX1 250 aa12.05□□□□□ -0.48
SMPDL3A-202ENST00000487215 BORCS7Q96B45 105 aa12.05□□□□□ -0.48
SMPDL3A-202ENST00000487215 FAM210AQ96ND0 272 aa12.05□□□□□ -0.48
SMPDL3A-202ENST00000487215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.04□□□□□ -0.48
SMPDL3A-202ENST00000487215 IGKV2-29A2NJV5 120 aaPredicted RBP12.04□□□□□ -0.48
SMPDL3A-202ENST00000487215 Q6ZRP5 223 aa12.04□□□□□ -0.48
SMPDL3A-202ENST00000487215 FAM231DQ6ZW35 169 aa12.04□□□□□ -0.48
SMPDL3A-202ENST00000487215 CT83Q5H943 113 aa12.03□□□□□ -0.48
SMPDL3A-202ENST00000487215 LINC00526Q96FQ7 95 aa12.03□□□□□ -0.48
SMPDL3A-202ENST00000487215 PKIGQ9Y2B9 76 aa12.03□□□□□ -0.48
SMPDL3A-202ENST00000487215 SDHAF1A6NFY7 115 aa12.02□□□□□ -0.49
SMPDL3A-202ENST00000487215 I3L3M4 83 aa12.02□□□□□ -0.49
SMPDL3A-202ENST00000487215 FGF6P10767 208 aa12.02□□□□□ -0.49
SMPDL3A-202ENST00000487215 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.49
SMPDL3A-202ENST00000487215 RPL39LQ96EH5 51 aaKnown RBP12.02□□□□□ -0.49
SMPDL3A-202ENST00000487215 LPAP08519 4548 aa12.02□□□□□ -0.49
SMPDL3A-202ENST00000487215 PMCHP20382 165 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms