RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
VAMP3-203ENST00000487194 VAMP8Q9BV40 100 aa4.37□□□□□ -1.71
VAMP3-203ENST00000487194 HHLA3Q9XRX5 114 aa4.37□□□□□ -1.71
VAMP3-203ENST00000487194 HUWE1Q7Z6Z7 4374 aaKnown RBP4.37□□□□□ -1.71
VAMP3-203ENST00000487194 MGAM2Q2M2H8 2515 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 TRAV12-1A0A0B4J245 112 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 HSBP1L1C9JCN9 74 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 TSTD3H0UI37 97 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 H0Y8G0 127 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 ATP5G1P05496 136 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 UBE2D3P61077 147 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 PKIAP61925 76 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 UBE2D2P62837 147 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 TMEM97Q5BJF2 176 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 PAPPA-AS1Q5QFB9 102 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 CDPF1Q6NVV7 123 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 SPATA25Q9BR10 227 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 C11orf68Q9H3H3 251 aaKnown RBP4.36□□□□□ -1.71
VAMP3-203ENST00000487194 ZMAT4Q9H898 229 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 PRO0255Q9UI72 69 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 DNAH9Q9NYC9 4486 aa4.36□□□□□ -1.71
VAMP3-203ENST00000487194 A0A087WX48 190 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 GAGE12JA6NER3 117 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 IGIPA6NJ69 53 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 DEFB4AO15263 64 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 CRYBA4P53673 196 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 GAGE1Q13065 139 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 GAGE4Q13068 117 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 GAGE5Q13069 117 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 GAGE13Q4V321 117 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 ZNF664Q8N3J9 261 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 PHLDA1Q8WV24 401 aaPredicted RBP4.35□□□□□ -1.71
VAMP3-203ENST00000487194 GTSF1LQ9H1H1 148 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 SPANXA1Q9NS26 97 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 Q9UF83 564 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 PYGO1Q9Y3Y4 419 aa4.35□□□□□ -1.71
VAMP3-203ENST00000487194 TRBV25-1A0A075B6N4 114 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 IGHV3-38A0A0C4DH36 116 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 H7C423 109 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 K7EIL1 84 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 PAX4O43316 350 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 DPM2O94777 84 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 IGKCP01834 107 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 LINC00694P0DN24 101 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 PLNP26678 52 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 RPL39P62891 51 aaKnown RBP4.34□□□□□ -1.71
VAMP3-203ENST00000487194 ODF1Q14990 250 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 PMVKQ15126 192 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 SPATA45Q537H7 98 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 DEFB121Q5J5C9 76 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 ATOH7Q8N100 152 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 BAALCQ8WXS3 180 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 CHCHD7Q9BUK0 85 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 KRTAP17-1Q9BYP8 105 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 CELA1Q9UNI1 258 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 PAM16Q9Y3D7 125 aa4.34□□□□□ -1.71
VAMP3-203ENST00000487194 CHTOPQ9Y3Y2 248 aaKnown RBP4.34□□□□□ -1.71
VAMP3-203ENST00000487194 MEGF8Q7Z7M0 2845 aa4.34□□□□□ -1.72
VAMP3-203ENST00000487194 PRSS29PA6NIE9 313 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 PCP4L1A6NKN8 68 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 F8VRH5 84 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 UBE2L6O14933 153 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 GYPEP15421 78 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 SH2D6Q7Z4S9 175 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 SBSPONQ8IVN8 264 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 ATP6V0E2Q8NHE4 81 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 DEFB104AQ8WTQ1 72 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 PMCHL2Q9BQD1 86 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 TM2D3Q9BRN9 247 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 VCX2Q9H322 139 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 PRO1933Q9H354 126 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 RETNQ9HD89 108 aa4.33□□□□□ -1.72
VAMP3-203ENST00000487194 MRPL35Q9NZE8 188 aaKnown RBP4.33□□□□□ -1.72
VAMP3-203ENST00000487194 IGLV4-3A0A075B6K6 122 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.32□□□□□ -1.72
VAMP3-203ENST00000487194 TRAV26-1A0A087WT03 109 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 LOC100131303A0A0U1RQF7 123 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 IGKV2-29A2NJV5 120 aaPredicted RBP4.32□□□□□ -1.72
VAMP3-203ENST00000487194 F5H768 121 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 PRB2P02812 416 aaPredicted RBP4.32□□□□□ -1.72
VAMP3-203ENST00000487194 MRPS36P82909 103 aaKnown RBP4.32□□□□□ -1.72
VAMP3-203ENST00000487194 MRPL23Q16540 153 aaKnown RBP4.32□□□□□ -1.72
VAMP3-203ENST00000487194 C12orf74Q32Q52 190 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 DGAT2L7PQ6IED9 249 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 MRPL52Q86TS9 123 aaKnown RBP4.32□□□□□ -1.72
VAMP3-203ENST00000487194 TMEM101Q96IK0 257 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 VSIG2Q96IQ7 327 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 C2orf88Q9BSF0 95 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 TMEM243Q9BU79 118 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 CST9LQ9H4G1 147 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 UBE2D4Q9Y2X8 147 aa4.32□□□□□ -1.72
VAMP3-203ENST00000487194 CSDC2Q9Y534 153 aaKnown RBP4.32□□□□□ -1.72
VAMP3-203ENST00000487194 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 A0A0J9YWU9 116 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 hDV102S1A0JD36 115 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 H3BNG1 76 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 IGLC3P0DOY3 106 aa4.31□□□□□ -1.72
VAMP3-203ENST00000487194 FGF6P10767 208 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 359.5 ms