RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 POM121L12Q8N7R1 296 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 OR10P1Q8NGE3 313 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 TMEM167AQ8TBQ9 72 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 CHCHD10Q8WYQ3 142 aaPredicted RBP4.85□□□□□ -1.63
HDAC3-209ENST00000486618 S100A16Q96FQ6 103 aaKnown RBP4.85□□□□□ -1.63
HDAC3-209ENST00000486618 AGPAT4-IT1Q9H0P7 198 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 CACFD1Q9UGQ2 172 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 DNAH6Q9C0G6 4158 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 IGLV11-55A0A075B6I3 123 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 IGHV4-4A0A075B6R2 117 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 A0A087WWC5 75 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 IGHV3-35A0A0C4DH35 117 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 TMEM235A6NFC5 223 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 H3BRM9 83 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 LST1O00453 97 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 RTL8CO15255 209 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 DEFB4AO15263 64 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 SLC25A6P12236 298 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 NFYAP23511 347 aaPredicted RBP4.84□□□□□ -1.63
HDAC3-209ENST00000486618 LGALS9BQ3B8N2 356 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 KIAA1644Q3SXP7 199 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 TMEM190Q8WZ59 177 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 ZC2HC1AQ96GY0 325 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 RNF126Q9BV68 326 aa4.84□□□□□ -1.63
HDAC3-209ENST00000486618 TRBV20-1A0A075B6N2 111 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 E7EUB6 86 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 M0R2N4 97 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 NDUFA4O00483 81 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 COX7A2P2O60397 106 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 HYPMO75409 117 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 TCRAP04437 139 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 LINC00869P0C866 280 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 TRGC1P0CF51 173 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 SCGB1C2P0DMR2 95 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 SLC25A4P12235 298 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 HLA-DRB4P13762 266 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 CRISP2P16562 243 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 HLA-DMBP28068 263 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 TAS2R45P59539 299 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 FXYD4P59646 89 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 GFI1BQ5VTD9 330 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 MORN5Q5VZ52 161 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 LCA10Q71F78 164 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 LINC00337Q8N6G1 96 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 SLC39A9Q9NUM3 307 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 SERP1Q9Y6X1 66 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 HLA-DRB4X5D2U9 266 aa4.83□□□□□ -1.64
HDAC3-209ENST00000486618 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 VPS13DQ5THJ4 4388 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 IGHV3OR16-13A0A075B7E8 117 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 TRAV1-2A0A0B4J238 106 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 C7orf77A4D0Y5 90 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 FAM24AA6NFZ4 105 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 A8MUN3 132 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 C9JQL5 133 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 COX7A2LO14548 114 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 ZNF73O43830 326 aaPredicted RBP4.82□□□□□ -1.64
HDAC3-209ENST00000486618 SLC25A5P05141 298 aaKnown RBP4.82□□□□□ -1.64
HDAC3-209ENST00000486618 MIFP14174 115 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 TAS2R19P59542 299 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 BPIFA4PQ86YQ2 179 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 FAM218AQ96MZ4 157 aa4.82□□□□□ -1.64
HDAC3-209ENST00000486618 AGRNO00468 2067 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 IGKV3-7A0A075B6H7 116 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 IGHV6-1A0A0B4J1U7 121 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 CD3DP04234 171 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 TPT1P13693 172 aaKnown RBP4.81□□□□□ -1.64
HDAC3-209ENST00000486618 BTCP35070 178 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 RPL30P62888 115 aaKnown RBP4.81□□□□□ -1.64
HDAC3-209ENST00000486618 TMEM91Q6ZNR0 172 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 Q6ZTC4 211 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 TEN1Q86WV5 123 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 Q8NAQ8 132 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 SHANK2-AS3Q9BTD1 123 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 RHPN1-AS1Q9BWJ2 59 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 SLC25A22Q9H936 323 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 SPCS1Q9Y6A9 102 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 ABCA13Q86UQ4 5058 aa4.81□□□□□ -1.64
HDAC3-209ENST00000486618 DEFB131BA0A096LNP1 70 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 IGHV7-4-1A0A0J9YVY3 117 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 ZFP92A6NM28 416 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 H3BT86 120 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 ERHP84090 104 aaKnown RBP4.8□□□□□ -1.64
HDAC3-209ENST00000486618 RBMY1FQ15415 496 aaKnown RBP4.8□□□□□ -1.64
HDAC3-209ENST00000486618 SPATA45Q537H7 98 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 MUC21Q5SSG8 566 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 DPPA3Q6W0C5 159 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 UBE2DNLQ8IWF7 75 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 OR10AG1Q8NH19 301 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 LSM10Q969L4 123 aaKnown RBP4.8□□□□□ -1.64
HDAC3-209ENST00000486618 CCL28Q9NRJ3 127 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 NDUFB11Q9NX14 153 aa4.8□□□□□ -1.64
HDAC3-209ENST00000486618 LSM2Q9Y333 95 aaKnown RBP4.8□□□□□ -1.64
HDAC3-209ENST00000486618 IGHV3OR16-12A0A075B7B8 117 aa4.79□□□□□ -1.64
HDAC3-209ENST00000486618 IGHV3OR16-8A0A075B7F1 116 aa4.79□□□□□ -1.64
HDAC3-209ENST00000486618 TRAV14DV4A0A0A6YYC5 116 aa4.79□□□□□ -1.64
HDAC3-209ENST00000486618 IGHV3-21A0A0B4J1V1 117 aa4.79□□□□□ -1.64
HDAC3-209ENST00000486618 TRBV27A0A0K0K1C4 114 aa4.79□□□□□ -1.64
HDAC3-209ENST00000486618 A0A1W2PS18 150 aa4.79□□□□□ -1.64
HDAC3-209ENST00000486618 C16orf90A8MZG2 172 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms