RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 FCER1GP30273 86 aa7.79□□□□□ -1.16
NUP50-216ENST00000486184 CBLN2Q8IUK8 224 aa7.79□□□□□ -1.16
NUP50-216ENST00000486184 NRACQ8N912 160 aa7.79□□□□□ -1.16
NUP50-216ENST00000486184 KIR2DL4Q99706 377 aa7.79□□□□□ -1.16
NUP50-216ENST00000486184 C20orf78Q9BR46 151 aa7.79□□□□□ -1.16
NUP50-216ENST00000486184 TMEM70Q9BUB7 260 aa7.79□□□□□ -1.16
NUP50-216ENST00000486184 LAMTOR2Q9Y2Q5 125 aa7.79□□□□□ -1.16
NUP50-216ENST00000486184 A0A087WX48 190 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 TMEM262E9PQX1 116 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 K7EP13 123 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 NPYP01303 97 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 IGHV3-30P01768 117 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 IGHV3-33P01772 117 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 IGHV3-30-3P0DP02 117 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 IGHV3-30-5P0DP03 117 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 FABP9Q0Z7S8 132 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 C10orf126Q8N4M7 172 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 DEFB104AQ8WTQ1 72 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 TMEM243Q9BU79 118 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 TRAPPC1Q9Y5R8 145 aa7.78□□□□□ -1.16
NUP50-216ENST00000486184 TRBV27A0A0K0K1C4 114 aa7.77□□□□□ -1.17
NUP50-216ENST00000486184 TCAPO15273 167 aa7.77□□□□□ -1.17
NUP50-216ENST00000486184 DNAH10OSP0CZ25 163 aa7.77□□□□□ -1.17
NUP50-216ENST00000486184 POLR2KP53803 58 aaKnown RBP7.77□□□□□ -1.17
NUP50-216ENST00000486184 IQCJQ1A5X6 159 aa7.77□□□□□ -1.17
NUP50-216ENST00000486184 KIAA1644Q3SXP7 199 aa7.77□□□□□ -1.17
NUP50-216ENST00000486184 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.17
NUP50-216ENST00000486184 NTM-AS1Q6ZSK4 140 aa7.77□□□□□ -1.17
NUP50-216ENST00000486184 LYSTQ99698 3801 aa7.76□□□□□ -1.17
NUP50-216ENST00000486184 S100A1P23297 94 aa7.76□□□□□ -1.17
NUP50-216ENST00000486184 RPL32P62910 135 aaKnown RBP7.76□□□□□ -1.17
NUP50-216ENST00000486184 GAGE6Q13070 117 aa7.76□□□□□ -1.17
NUP50-216ENST00000486184 NIT1Q86X76 327 aa7.76□□□□□ -1.17
NUP50-216ENST00000486184 CHCHD7Q9BUK0 85 aa7.76□□□□□ -1.17
NUP50-216ENST00000486184 SMIM2Q9BVW6 85 aa7.76□□□□□ -1.17
NUP50-216ENST00000486184 LOC389332A0A1B0GUA5 103 aa7.75□□□□□ -1.17
NUP50-216ENST00000486184 ATP6V1G1O75348 118 aa7.75□□□□□ -1.17
NUP50-216ENST00000486184 TSHBP01222 138 aa7.75□□□□□ -1.17
NUP50-216ENST00000486184 RAB5AP20339 215 aa7.75□□□□□ -1.17
NUP50-216ENST00000486184 AMMECR1LQ6DCA0 310 aa7.75□□□□□ -1.17
NUP50-216ENST00000486184 SMAGPQ0VAQ4 97 aa7.74□□□□□ -1.17
NUP50-216ENST00000486184 Q6ZR54 194 aa7.74□□□□□ -1.17
NUP50-216ENST00000486184 TMEM18Q96B42 140 aa7.74□□□□□ -1.17
NUP50-216ENST00000486184 YPEL4Q96NS1 127 aa7.74□□□□□ -1.17
NUP50-216ENST00000486184 H7C423 109 aa7.73□□□□□ -1.17
NUP50-216ENST00000486184 CRPP02741 224 aa7.73□□□□□ -1.17
NUP50-216ENST00000486184 ANGP03950 147 aaKnown RBP7.73□□□□□ -1.17
NUP50-216ENST00000486184 MPV17L2Q567V2 206 aa7.73□□□□□ -1.17
NUP50-216ENST00000486184 C1orf134Q5TEV5 83 aa7.73□□□□□ -1.17
NUP50-216ENST00000486184 RNASEKQ6P5S7 137 aaKnown RBP7.73□□□□□ -1.17
NUP50-216ENST00000486184 C6orf223Q8N319 242 aa7.73□□□□□ -1.17
NUP50-216ENST00000486184 NXT2Q9NPJ8 142 aaKnown RBP7.73□□□□□ -1.17
NUP50-216ENST00000486184 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.72□□□□□ -1.17
NUP50-216ENST00000486184 IGKV2-29A2NJV5 120 aaPredicted RBP7.72□□□□□ -1.17
NUP50-216ENST00000486184 PRSS47A8MTI9 375 aa7.72□□□□□ -1.17
NUP50-216ENST00000486184 BTF3P20290 206 aaKnown RBP7.72□□□□□ -1.17
NUP50-216ENST00000486184 NFE4Q86UQ8 179 aa7.72□□□□□ -1.17
NUP50-216ENST00000486184 Q8N3U1 123 aa7.72□□□□□ -1.17
NUP50-216ENST00000486184 Q8N8P6 123 aa7.72□□□□□ -1.17
NUP50-216ENST00000486184 PRSS3P2Q8NHM4 247 aa7.72□□□□□ -1.17
NUP50-216ENST00000486184 TMEM101Q96IK0 257 aa7.72□□□□□ -1.17
NUP50-216ENST00000486184 ALKBH7Q9BT30 221 aaPredicted RBP7.72□□□□□ -1.17
NUP50-216ENST00000486184 KRTAP1-5Q9BYS1 174 aa7.72□□□□□ -1.17
NUP50-216ENST00000486184 KLK12Q9UKR0 248 aa7.72□□□□□ -1.17
NUP50-216ENST00000486184 IBA57-AS1B1ANH7 110 aa7.71□□□□□ -1.18
NUP50-216ENST00000486184 SCO1O75880 301 aa7.71□□□□□ -1.18
NUP50-216ENST00000486184 RBX1P62877 108 aa7.71□□□□□ -1.18
NUP50-216ENST00000486184 LAGE3Q14657 143 aa7.71□□□□□ -1.18
NUP50-216ENST00000486184 DGAT2L7PQ6IED9 249 aa7.71□□□□□ -1.18
NUP50-216ENST00000486184 Q8N976 141 aa7.71□□□□□ -1.18
NUP50-216ENST00000486184 Q9HAA7 133 aa7.71□□□□□ -1.18
NUP50-216ENST00000486184 TRAV8-3A0A0A6YYJ7 113 aa7.7□□□□□ -1.18
NUP50-216ENST00000486184 A0A1B0GUV1 79 aa7.7□□□□□ -1.18
NUP50-216ENST00000486184 K7EMI3 77 aa7.7□□□□□ -1.18
NUP50-216ENST00000486184 FGF6P10767 208 aa7.7□□□□□ -1.18
NUP50-216ENST00000486184 ESDP10768 282 aa7.7□□□□□ -1.18
NUP50-216ENST00000486184 ZNF25P17030 456 aaPredicted RBP7.7□□□□□ -1.18
NUP50-216ENST00000486184 IFI27P40305 119 aaPredicted RBP7.7□□□□□ -1.18
NUP50-216ENST00000486184 Q0VG73 95 aa7.7□□□□□ -1.18
NUP50-216ENST00000486184 ORMDL2Q53FV1 153 aa7.7□□□□□ -1.18
NUP50-216ENST00000486184 RMI2Q96E14 147 aa7.7□□□□□ -1.18
NUP50-216ENST00000486184 KMT2CQ8NEZ4 4911 aaKnown RBP7.69□□□□□ -1.18
NUP50-216ENST00000486184 VPS13DQ5THJ4 4388 aa7.69□□□□□ -1.18
NUP50-216ENST00000486184 FA2HQ7L5A8 372 aa7.69□□□□□ -1.18
NUP50-216ENST00000486184 C20orf203Q8NBC4 194 aa7.69□□□□□ -1.18
NUP50-216ENST00000486184 OR5A1Q8NGJ0 315 aa7.69□□□□□ -1.18
NUP50-216ENST00000486184 UBE2WQ96B02 151 aa7.69□□□□□ -1.18
NUP50-216ENST00000486184 DNAH1Q9P2D7 4330 aa7.69□□□□□ -1.18
NUP50-216ENST00000486184 COLCA2A8K830 154 aa7.68□□□□□ -1.18
NUP50-216ENST00000486184 PSCAO43653 123 aa7.68□□□□□ -1.18
NUP50-216ENST00000486184 G0S2P27469 103 aa7.68□□□□□ -1.18
NUP50-216ENST00000486184 CLPSL2Q6UWE3 100 aa7.68□□□□□ -1.18
NUP50-216ENST00000486184 LINC00269Q8N2A0 174 aa7.68□□□□□ -1.18
NUP50-216ENST00000486184 TM2D2Q9BX73 214 aa7.68□□□□□ -1.18
NUP50-216ENST00000486184 IGLV4-60A0A075B6I1 120 aa7.67□□□□□ -1.18
NUP50-216ENST00000486184 TRGC2P03986 189 aa7.67□□□□□ -1.18
NUP50-216ENST00000486184 RAB5BP61020 215 aa7.67□□□□□ -1.18
NUP50-216ENST00000486184 REG3AQ06141 175 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms