RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 CAMPP49913 170 aa12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 GAGE1Q13065 139 aa12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 GAGE4Q13068 117 aa12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 GAGE5Q13069 117 aa12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 ZNF56Q15929 161 aa12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 GAGE13Q4V321 117 aa12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 MRPL54Q6P161 138 aaKnown RBP12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 DAZ4Q86SG3 579 aaKnown RBP12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 DAZ3Q9NR90 486 aaKnown RBP12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 Q9UF83 564 aa12.07□□□□□ -0.48
RHBDF1-209ENST00000486045 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.06□□□□□ -0.48
RHBDF1-209ENST00000486045 TRAV9-1A0A075B6T8 112 aa12.06□□□□□ -0.48
RHBDF1-209ENST00000486045 MGPP08493 103 aa12.06□□□□□ -0.48
RHBDF1-209ENST00000486045 LINC01620Q4KN68 170 aa12.06□□□□□ -0.48
RHBDF1-209ENST00000486045 A0A1B0GXF2 115 aa12.05□□□□□ -0.48
RHBDF1-209ENST00000486045 PLA2G1BP04054 148 aaKnown RBP12.05□□□□□ -0.48
RHBDF1-209ENST00000486045 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
RHBDF1-209ENST00000486045 HBBP68871 147 aa12.05□□□□□ -0.48
RHBDF1-209ENST00000486045 URGCP-MRPS24S4R325 110 aa12.05□□□□□ -0.48
RHBDF1-209ENST00000486045 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
RHBDF1-209ENST00000486045 RAB4AP20338 218 aa12.03□□□□□ -0.48
RHBDF1-209ENST00000486045 SUMO4Q6EEV6 95 aa12.03□□□□□ -0.48
RHBDF1-209ENST00000486045 GATD1Q8NB37 220 aa12.03□□□□□ -0.48
RHBDF1-209ENST00000486045 BAALCQ8WXS3 180 aa12.03□□□□□ -0.48
RHBDF1-209ENST00000486045 TRBV10-1A0A0K0K1A3 114 aa12.02□□□□□ -0.49
RHBDF1-209ENST00000486045 KRTAP29-1A8MX34 341 aaPredicted RBP12.02□□□□□ -0.49
RHBDF1-209ENST00000486045 H7C1H1 209 aa12.02□□□□□ -0.49
RHBDF1-209ENST00000486045 M0QY20 66 aa12.02□□□□□ -0.49
RHBDF1-209ENST00000486045 RASL11AQ6T310 242 aa12.02□□□□□ -0.49
RHBDF1-209ENST00000486045 DNAJC30Q96LL9 226 aa12.02□□□□□ -0.49
RHBDF1-209ENST00000486045 FAM104BQ5XKR9 115 aa12.01□□□□□ -0.49
RHBDF1-209ENST00000486045 SCXQ7RTU7 201 aa12.01□□□□□ -0.49
RHBDF1-209ENST00000486045 AMN1Q8IY45 258 aa12.01□□□□□ -0.49
RHBDF1-209ENST00000486045 RNF185Q96GF1 192 aa12.01□□□□□ -0.49
RHBDF1-209ENST00000486045 ELOBQ15370 118 aa12□□□□□ -0.49
RHBDF1-209ENST00000486045 DEFB104AQ8WTQ1 72 aa12□□□□□ -0.49
RHBDF1-209ENST00000486045 SMCO4Q9NRQ5 59 aa12□□□□□ -0.49
RHBDF1-209ENST00000486045 TRAV26-2A0A0B4J265 109 aa11.99□□□□□ -0.49
RHBDF1-209ENST00000486045 RPL36AP83881 106 aaKnown RBP11.99□□□□□ -0.49
RHBDF1-209ENST00000486045 RPL36ALQ969Q0 106 aaKnown RBP11.99□□□□□ -0.49
RHBDF1-209ENST00000486045 MRAP2Q96G30 205 aa11.99□□□□□ -0.49
RHBDF1-209ENST00000486045 NIT2Q9NQR4 276 aa11.99□□□□□ -0.49
RHBDF1-209ENST00000486045 LRP1Q07954 4544 aaKnown RBP11.99□□□□□ -0.49
RHBDF1-209ENST00000486045 TRBV7-3A0A075B6L6 115 aa11.98□□□□□ -0.49
RHBDF1-209ENST00000486045 MRPL51Q4U2R6 128 aaKnown RBP11.98□□□□□ -0.49
RHBDF1-209ENST00000486045 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
RHBDF1-209ENST00000486045 TRBV24-1A0A075B6N3 115 aa11.97□□□□□ -0.49
RHBDF1-209ENST00000486045 S100A1P23297 94 aa11.97□□□□□ -0.49
RHBDF1-209ENST00000486045 IGKV2D-24A0A075B6R9 120 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 TGIF2-C20orf24A0A0A6YYL0 155 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 KRTAP10-4P60372 401 aaPredicted RBP11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 COX19Q49B96 90 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 TMEM136Q6ZRR5 245 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 NIT1Q86X76 327 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 CBLN2Q8IUK8 224 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 YPEL4Q96NS1 127 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 GNB1LQ9BYB4 327 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 KLK12Q9UKR0 248 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 COX11Q9Y6N1 276 aa11.96□□□□□ -0.49
RHBDF1-209ENST00000486045 HMCN2Q8NDA2 5059 aa11.96□□□□□ -0.5
RHBDF1-209ENST00000486045 ATP6V1G1O75348 118 aa11.95□□□□□ -0.5
RHBDF1-209ENST00000486045 CKS2P33552 79 aa11.95□□□□□ -0.5
RHBDF1-209ENST00000486045 UBE2D3P61077 147 aa11.95□□□□□ -0.5
RHBDF1-209ENST00000486045 UBE2D2P62837 147 aa11.95□□□□□ -0.5
RHBDF1-209ENST00000486045 GAS8-AS1O95177 125 aa11.94□□□□□ -0.5
RHBDF1-209ENST00000486045 Q8N976 141 aa11.94□□□□□ -0.5
RHBDF1-209ENST00000486045 RMI2Q96E14 147 aa11.94□□□□□ -0.5
RHBDF1-209ENST00000486045 RPL39LQ96EH5 51 aaKnown RBP11.94□□□□□ -0.5
RHBDF1-209ENST00000486045 CHAC1Q9BUX1 264 aa11.94□□□□□ -0.5
RHBDF1-209ENST00000486045 SMKR1H3BMG3 65 aa11.93□□□□□ -0.5
RHBDF1-209ENST00000486045 PPP1R17O96001 155 aa11.93□□□□□ -0.5
RHBDF1-209ENST00000486045 HLA-DQA1P01909 254 aa11.93□□□□□ -0.5
RHBDF1-209ENST00000486045 PPBPP02775 128 aa11.93□□□□□ -0.5
RHBDF1-209ENST00000486045 CIRBP-AS1Q8TBR5 109 aa11.93□□□□□ -0.5
RHBDF1-209ENST00000486045 UBE2WQ96B02 151 aa11.93□□□□□ -0.5
RHBDF1-209ENST00000486045 FAT3Q8TDW7 4589 aa11.93□□□□□ -0.5
RHBDF1-209ENST00000486045 TRBV6-5A0A0K0K1A5 114 aa11.92□□□□□ -0.5
RHBDF1-209ENST00000486045 NCR2O95944 276 aa11.92□□□□□ -0.5
RHBDF1-209ENST00000486045 RPS10P46783 165 aaKnown RBP11.92□□□□□ -0.5
RHBDF1-209ENST00000486045 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.92□□□□□ -0.5
RHBDF1-209ENST00000486045 D6R8Y8 96 aa11.91□□□□□ -0.5
RHBDF1-209ENST00000486045 APCSP02743 223 aa11.91□□□□□ -0.5
RHBDF1-209ENST00000486045 MT-ND6P03923 174 aa11.91□□□□□ -0.5
RHBDF1-209ENST00000486045 NRACQ8N912 160 aa11.91□□□□□ -0.5
RHBDF1-209ENST00000486045 ST20Q9HBF5 79 aa11.91□□□□□ -0.5
RHBDF1-209ENST00000486045 ORMDL3Q8N138 153 aa11.9□□□□□ -0.5
RHBDF1-209ENST00000486045 A0A087WX48 190 aa11.89□□□□□ -0.51
RHBDF1-209ENST00000486045 SCO1O75880 301 aa11.89□□□□□ -0.51
RHBDF1-209ENST00000486045 TNFRSF6BO95407 300 aa11.89□□□□□ -0.51
RHBDF1-209ENST00000486045 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
RHBDF1-209ENST00000486045 SDHAF1A6NFY7 115 aa11.88□□□□□ -0.51
RHBDF1-209ENST00000486045 C20orf78Q9BR46 151 aa11.88□□□□□ -0.51
RHBDF1-209ENST00000486045 MRPL18Q9H0U6 180 aaKnown RBP11.88□□□□□ -0.51
RHBDF1-209ENST00000486045 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
RHBDF1-209ENST00000486045 PHOX2AO14813 284 aa11.87□□□□□ -0.51
RHBDF1-209ENST00000486045 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
RHBDF1-209ENST00000486045 FABP9Q0Z7S8 132 aa11.87□□□□□ -0.51
RHBDF1-209ENST00000486045 KIAA1644Q3SXP7 199 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms