RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 Q8N8P6 123 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 COPS9Q8WXC6 57 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 AQP10Q96PS8 301 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 SPTBN2O15020 2390 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 FAM208BQ5VWN6 2430 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 CHD9Q3L8U1 2897 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 CFTRP13569 1480 aa-0.16□□□□□ -2.44
GCFC2-209ENST00000486016 ABCA2Q9BZC7 2435 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 PIGBOS1A0A0B4J2F0 54 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 SELENOWP63302 87 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 PRDM2Q13029 1718 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 CCDC58Q4VC31 144 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 TTC9CQ8N5M4 171 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 ARL11Q969Q4 196 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 LINC00470Q9BZP3 86 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 RERGLQ9H628 205 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 SERP1Q9Y6X1 66 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 NHSL1Q5SYE7 1610 aa-0.17□□□□□ -2.44
GCFC2-209ENST00000486016 TRAV22A0A0B4J277 110 aa-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 CTXND1A0A1B0GTU2 59 aa-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 NDUFA2O43678 99 aa-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 GNG7O60262 68 aa-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 WFDC2Q14508 124 aa-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 C12orf73Q69YU5 71 aa-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 Q6AWC8 147 aa-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 SNRNP25Q9BV90 132 aaKnown RBP-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 LENEPQ9Y5L5 61 aa-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 MYH9P35579 1960 aaKnown RBP-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 ARAP2Q8WZ64 1704 aa-0.18□□□□□ -2.44
GCFC2-209ENST00000486016 SSPOA2VEC9 5147 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 FAM25AB3EWG3 89 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 FAM25CB3EWG5 89 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 FAM25GB3EWG6 89 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 BCE1O60756 84 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 SPAG11BQ08648 103 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 MEIG1Q5JSS6 88 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 SPAG11AQ6PDA7 123 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 SMIM4Q8WVI0 70 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 V9GYH0 126 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 CACNA1AO00555 2505 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 PTPRQQ9UMZ3 2332 aa-0.19□□□□□ -2.44
GCFC2-209ENST00000486016 PPIP5K1Q6PFW1 1433 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 AKAP6Q13023 2319 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 MYH8P13535 1937 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 HAMPP81172 84 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 DEFB109BQ30KR1 87 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 Q8IZM0 81 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 NAA60Q9H7X0 242 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 SPCS1Q9Y6A9 102 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 LRP6O75581 1613 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 LAMC1P11047 1609 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 DOCK1Q14185 1865 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 C2CD3Q4AC94 2353 aa-0.2□□□□□ -2.44
GCFC2-209ENST00000486016 NCOR1O75376 2440 aa-0.21□□□□□ -2.44
GCFC2-209ENST00000486016 KDM3BQ7LBC6 1761 aa-0.21□□□□□ -2.44
GCFC2-209ENST00000486016 PLXNB2O15031 1838 aa-0.21□□□□□ -2.44
GCFC2-209ENST00000486016 PATJQ8NI35 1801 aa-0.21□□□□□ -2.44
GCFC2-209ENST00000486016 WNK3Q9BYP7 1800 aa-0.21□□□□□ -2.44
GCFC2-209ENST00000486016 S100A12P80511 92 aa-0.21□□□□□ -2.44
GCFC2-209ENST00000486016 FAM107BQ9H098 131 aa-0.21□□□□□ -2.44
GCFC2-209ENST00000486016 PHLPP1O60346 1717 aa-0.21□□□□□ -2.44
GCFC2-209ENST00000486016 HMCN2Q8NDA2 5059 aa-0.22□□□□□ -2.44
GCFC2-209ENST00000486016 Q5VSD8 79 aa-0.22□□□□□ -2.44
GCFC2-209ENST00000486016 AMELXQ99217 191 aa-0.22□□□□□ -2.44
GCFC2-209ENST00000486016 TSC22D3Q99576 134 aa-0.22□□□□□ -2.44
GCFC2-209ENST00000486016 NDUFA4L2Q9NRX3 87 aa-0.22□□□□□ -2.44
GCFC2-209ENST00000486016 ZNF236Q9UL36 1845 aa-0.22□□□□□ -2.45
GCFC2-209ENST00000486016 MBD5Q9P267 1494 aa-0.22□□□□□ -2.45
GCFC2-209ENST00000486016 ERCC6L2Q5T890 1561 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 LRRC37A2A6NM11 1700 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 ZNF292O60281 2723 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 FLNCQ14315 2725 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 SYNE2Q8WXH0 6885 aaKnown RBP-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 MIF4GDA9UHW6 222 aaKnown RBP-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 K7EP13 123 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 S100A3P33764 101 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 BTG2P78543 158 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 Q56UQ5 140 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 TMEM170BQ5T4T1 132 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 PPP3R2Q96LZ3 170 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 PI4KAP42356 2102 aa-0.23□□□□□ -2.45
GCFC2-209ENST00000486016 PKDREJQ9NTG1 2253 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 DOPEY2Q9Y3R5 2298 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 PPRC1Q5VV67 1664 aaKnown RBP-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 FOCADQ5VW36 1801 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 LOC100130705A0A1B0GUX0 176 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 HMGN1P05114 100 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 SPRR1AP35321 89 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 COX17Q14061 63 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 TSLPQ969D9 159 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 LINC00472Q9H8W2 130 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 TP53AIP1Q9HCN2 124 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 PLCE1Q9P212 2302 aa-0.24□□□□□ -2.45
GCFC2-209ENST00000486016 TRBV7-3A0A075B6L6 115 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 F8VRH5 84 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 I3L2K1 104 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 UQCR11O14957 56 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 FGF7P21781 194 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 CATR1Q13166 79 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms