RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 IGKV2D-26A0A0A0MRZ7 120 aa7.98□□□□□ -1.13
SRGAP3-207ENST00000485983 USP17L23D6RBM5 183 aa7.98□□□□□ -1.13
SRGAP3-207ENST00000485983 E7EUB6 86 aa7.98□□□□□ -1.13
SRGAP3-207ENST00000485983 M0R2N4 97 aa7.98□□□□□ -1.13
SRGAP3-207ENST00000485983 SYCNQ0VAF6 134 aa7.98□□□□□ -1.13
SRGAP3-207ENST00000485983 FAM19A5Q7Z5A7 132 aaPredicted RBP7.98□□□□□ -1.13
SRGAP3-207ENST00000485983 KMT2EQ8IZD2 1858 aa7.98□□□□□ -1.13
SRGAP3-207ENST00000485983 CENPFP49454 3210 aa7.98□□□□□ -1.13
SRGAP3-207ENST00000485983 CEMP1Q6PRD7 247 aaPredicted RBP7.97□□□□□ -1.13
SRGAP3-207ENST00000485983 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
SRGAP3-207ENST00000485983 MSMPQ1L6U9 139 aa7.97□□□□□ -1.13
SRGAP3-207ENST00000485983 H3BT86 120 aa7.97□□□□□ -1.13
SRGAP3-207ENST00000485983 CLEC2BQ92478 149 aa7.97□□□□□ -1.13
SRGAP3-207ENST00000485983 HIGD1BQ9P298 99 aa7.97□□□□□ -1.13
SRGAP3-207ENST00000485983 NCOR2Q9Y618 2525 aa7.97□□□□□ -1.13
SRGAP3-207ENST00000485983 LINC00173Q6ZV60 143 aa7.96□□□□□ -1.13
SRGAP3-207ENST00000485983 C9orf85Q96MD7 179 aa7.96□□□□□ -1.13
SRGAP3-207ENST00000485983 TECTAO75443 2155 aa7.96□□□□□ -1.13
SRGAP3-207ENST00000485983 ANKHD1Q8IWZ3 2542 aaKnown RBP7.96□□□□□ -1.13
SRGAP3-207ENST00000485983 NDUFC2O95298 119 aa7.96□□□□□ -1.14
SRGAP3-207ENST00000485983 P0DMU3 169 aa7.96□□□□□ -1.14
SRGAP3-207ENST00000485983 FAM231AP0DMU4 169 aa7.96□□□□□ -1.14
SRGAP3-207ENST00000485983 FAM231CP0DMU5 169 aa7.96□□□□□ -1.14
SRGAP3-207ENST00000485983 TEN1Q86WV5 123 aa7.96□□□□□ -1.14
SRGAP3-207ENST00000485983 KIF26AQ9ULI4 1882 aaPredicted RBP7.96□□□□□ -1.14
SRGAP3-207ENST00000485983 WISP2O76076 250 aa7.96□□□□□ -1.14
SRGAP3-207ENST00000485983 TP53TG3Q9ULZ0 132 aa7.96□□□□□ -1.14
SRGAP3-207ENST00000485983 MIAQ16674 131 aa7.95□□□□□ -1.14
SRGAP3-207ENST00000485983 HIST2H2BDQ6DRA6 164 aa7.95□□□□□ -1.14
SRGAP3-207ENST00000485983 UBE2D3P61077 147 aa7.94□□□□□ -1.14
SRGAP3-207ENST00000485983 FAM236AA0A1B0GUQ0 79 aa7.94□□□□□ -1.14
SRGAP3-207ENST00000485983 FAM236BA0A1B0GV22 79 aa7.94□□□□□ -1.14
SRGAP3-207ENST00000485983 WDR87Q6ZQQ6 2873 aa7.94□□□□□ -1.14
SRGAP3-207ENST00000485983 TRBV6-4A0A1B0GX49 114 aa7.94□□□□□ -1.14
SRGAP3-207ENST00000485983 FSTL3O95633 263 aa7.94□□□□□ -1.14
SRGAP3-207ENST00000485983 COL4A3Q01955 1670 aa7.94□□□□□ -1.14
SRGAP3-207ENST00000485983 TRBV6-8A0A0A6YYG3 113 aa7.94□□□□□ -1.14
SRGAP3-207ENST00000485983 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
SRGAP3-207ENST00000485983 PIEZO1Q92508 2521 aa7.93□□□□□ -1.14
SRGAP3-207ENST00000485983 FXYD2P54710 66 aa7.93□□□□□ -1.14
SRGAP3-207ENST00000485983 CRYGBP07316 175 aa7.93□□□□□ -1.14
SRGAP3-207ENST00000485983 LINC01006Q8NI28 216 aa7.93□□□□□ -1.14
SRGAP3-207ENST00000485983 TTTY13Q9BZ97 58 aa7.93□□□□□ -1.14
SRGAP3-207ENST00000485983 ABCA2Q9BZC7 2435 aa7.93□□□□□ -1.14
SRGAP3-207ENST00000485983 HIVEP3Q5T1R4 2406 aa7.93□□□□□ -1.14
SRGAP3-207ENST00000485983 ODF1Q14990 250 aa7.92□□□□□ -1.14
SRGAP3-207ENST00000485983 KPRPQ5T749 579 aaPredicted RBP7.92□□□□□ -1.14
SRGAP3-207ENST00000485983 LY6LH3BQJ8 138 aa7.92□□□□□ -1.14
SRGAP3-207ENST00000485983 LINC00467Q9BRT7 94 aa7.92□□□□□ -1.14
SRGAP3-207ENST00000485983 XAGE1AQ9HD64 81 aa7.92□□□□□ -1.14
SRGAP3-207ENST00000485983 B5MCH6 92 aa7.92□□□□□ -1.14
SRGAP3-207ENST00000485983 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
SRGAP3-207ENST00000485983 IBA57-AS1B1ANH7 110 aa7.92□□□□□ -1.14
SRGAP3-207ENST00000485983 PSMG3-AS1Q96PY0 264 aa7.92□□□□□ -1.14
SRGAP3-207ENST00000485983 COA6Q5JTJ3 125 aaKnown RBP7.91□□□□□ -1.14
SRGAP3-207ENST00000485983 LINC00574Q9H8X3 128 aa7.91□□□□□ -1.14
SRGAP3-207ENST00000485983 NAV3Q8IVL0 2385 aa7.91□□□□□ -1.14
SRGAP3-207ENST00000485983 FOXI1Q12951 378 aa7.91□□□□□ -1.14
SRGAP3-207ENST00000485983 BBC3Q96PG8 261 aaPredicted RBP7.91□□□□□ -1.14
SRGAP3-207ENST00000485983 C2orf16Q68DN1 1984 aa7.91□□□□□ -1.14
SRGAP3-207ENST00000485983 C19orf71A6NCJ1 209 aa7.91□□□□□ -1.14
SRGAP3-207ENST00000485983 NEXN-AS1Q8NBZ9 246 aa7.91□□□□□ -1.14
SRGAP3-207ENST00000485983 CHD8Q9HCK8 2581 aa7.91□□□□□ -1.14
SRGAP3-207ENST00000485983 LINC00474Q9P2X8 69 aa7.9□□□□□ -1.14
SRGAP3-207ENST00000485983 SVIPQ8NHG7 77 aa7.9□□□□□ -1.14
SRGAP3-207ENST00000485983 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
SRGAP3-207ENST00000485983 NUP210Q8TEM1 1887 aaPredicted RBP7.9□□□□□ -1.14
SRGAP3-207ENST00000485983 DNAH12Q6ZR08 3092 aa7.9□□□□□ -1.14
SRGAP3-207ENST00000485983 A0A0J9YXY3 114 aa7.9□□□□□ -1.14
SRGAP3-207ENST00000485983 DENND4CQ5VZ89 1909 aa7.9□□□□□ -1.14
SRGAP3-207ENST00000485983 PLA2G2AP14555 144 aa7.9□□□□□ -1.15
SRGAP3-207ENST00000485983 ZNF80P51504 273 aaPredicted RBP7.9□□□□□ -1.15
SRGAP3-207ENST00000485983 C3orf22Q8N5N4 141 aa7.9□□□□□ -1.15
SRGAP3-207ENST00000485983 CDKN2A-AS1Q9UH64 79 aa7.9□□□□□ -1.15
SRGAP3-207ENST00000485983 CFAP126Q5VTH2 177 aa7.89□□□□□ -1.15
SRGAP3-207ENST00000485983 IGLV2-14P01704 120 aa7.89□□□□□ -1.15
SRGAP3-207ENST00000485983 EBI3Q14213 229 aa7.89□□□□□ -1.15
SRGAP3-207ENST00000485983 LOC107984640A0A0U1RRK4 108 aa7.89□□□□□ -1.15
SRGAP3-207ENST00000485983 PPDPFQ9H3Y8 114 aa7.89□□□□□ -1.15
SRGAP3-207ENST00000485983 PRR14LQ5THK1 2151 aa7.89□□□□□ -1.15
SRGAP3-207ENST00000485983 PCNTO95613 3336 aa7.89□□□□□ -1.15
SRGAP3-207ENST00000485983 IGLV4-69A0A075B6H9 119 aa7.89□□□□□ -1.15
SRGAP3-207ENST00000485983 LELP1Q5T871 98 aa7.88□□□□□ -1.15
SRGAP3-207ENST00000485983 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
SRGAP3-207ENST00000485983 ZNF702PQ9H963 129 aa7.88□□□□□ -1.15
SRGAP3-207ENST00000485983 Q8N976 141 aa7.88□□□□□ -1.15
SRGAP3-207ENST00000485983 NUPR2A6NF83 97 aa7.88□□□□□ -1.15
SRGAP3-207ENST00000485983 WFDC2Q14508 124 aa7.88□□□□□ -1.15
SRGAP3-207ENST00000485983 RBX1P62877 108 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 C11orf71Q6IPW1 123 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 LINC00643Q86TS7 51 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 NUPR1O60356 82 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 TCL1BO95988 128 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 UBE2D2P62837 147 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 DHRS4-AS1Q9P1J3 65 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 ADAMTS9Q9P2N4 1935 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 FSHBP01225 129 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 NAV2Q8IVL1 2488 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 C1orf158Q8N1D5 194 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms