RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 HIGD2BQ4VC39 106 aa3.81□□□□□ -1.8
NHLRC3-205ENST00000485407 PRR9Q5T870 116 aa3.81□□□□□ -1.8
NHLRC3-205ENST00000485407 PRNTQ86SH4 94 aa3.81□□□□□ -1.8
NHLRC3-205ENST00000485407 TMEM183AQ8IXX5 376 aa3.81□□□□□ -1.8
NHLRC3-205ENST00000485407 TVP23CQ96ET8 276 aa3.81□□□□□ -1.8
NHLRC3-205ENST00000485407 SMIM12Q96EX1 92 aa3.81□□□□□ -1.8
NHLRC3-205ENST00000485407 VAX2Q9UIW0 290 aa3.81□□□□□ -1.8
NHLRC3-205ENST00000485407 NACAE9PAV3 2078 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 A0A087WYN8 130 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 DEFB131BA0A096LNP1 70 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 A0A0J9YXV3 536 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 PRB4P10163 310 aaPredicted RBP3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 BCL2P10415 239 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 ATP5G3P48201 142 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 NKX2-5P52952 324 aaPredicted RBP3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 CCL20P78556 96 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 ALKAL2Q6UX46 152 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 Q6ZTC4 211 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 Q86TA4 180 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 NOP10Q9NPE3 64 aaKnown RBP3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 BIN3Q9NQY0 253 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 GNG13Q9P2W3 67 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 CELA1Q9UNI1 258 aa3.8□□□□□ -1.8
NHLRC3-205ENST00000485407 RBFOX3A6NFN3 312 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 KRTAP29-1A8MX34 341 aaPredicted RBP3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 H0Y9J4 135 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 TMEM250H0YL14 139 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 H3BNG1 76 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 SPINK4O60575 86 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 PRM2P04554 102 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 ATP5G1P05496 136 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 HERVK_113P61574 105 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 COX19Q49B96 90 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 DNLZQ5SXM8 178 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 FAM162BQ5T6X4 162 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 TEX261Q6UWH6 196 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 BAGE2Q86Y30 109 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 C15orf53Q8NAA6 179 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 PTH2Q96A98 100 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 MRAP2Q96G30 205 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 SMDT1Q9H4I9 107 aa3.79□□□□□ -1.8
NHLRC3-205ENST00000485407 TRAV8-6A0A0B4J262 113 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 A0A1B0GV50 99 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 M0R2P5 195 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 TCAPO15273 167 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 TYMSP04818 313 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 CXCL1P09341 107 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 DEFB130BP0DP73 79 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 DEFB130AP0DP74 79 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 RPL35P42766 123 aaKnown RBP3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 CRIP1P50238 77 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 ZNF80P51504 273 aaPredicted RBP3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 CEBPGP53567 150 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 PDZD11Q5EBL8 140 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 TTC32Q5I0X7 151 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 LGALS9CQ6DKI2 356 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 Q6ZQT7 251 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 C14orf178Q8N769 122 aaPredicted RBP3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 DNAH17Q9UFH2 4485 aa3.78□□□□□ -1.8
NHLRC3-205ENST00000485407 MYCBP2O75592 4640 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 APOBP04114 4563 aaKnown RBP3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 MUC2Q02817 5179 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 TRGV2A0A075B6R0 118 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 TRGV1A0A0A0MS02 117 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 IGKV3D-20A0A0C4DH25 116 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 IGLL5B9A064 214 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 C9JCJ5 164 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 GNRH2O43555 120 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 Q6ZTI0 123 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 ZNF767PQ75MW2 155 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 ZC2HC1AQ96GY0 325 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 MED9Q9NWA0 146 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 IL36BQ9NZH7 164 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 MDFICQ9P1T7 246 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 APLNQ9ULZ1 77 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 LY96Q9Y6Y9 160 aa3.77□□□□□ -1.81
NHLRC3-205ENST00000485407 SRRM2Q9UQ35 2752 aaKnown RBP3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 TRAV4A0A0B4J268 109 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 B4DEV8 164 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 KRBOX1C9JBD0 128 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 F5H768 121 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 SH2D1AO60880 128 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 P0DMU3 169 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 FAM231AP0DMU4 169 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 FAM231CP0DMU5 169 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 RNASE3P12724 160 aaKnown RBP3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 S100A4P26447 101 aaKnown RBP3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 ASIPP42127 132 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 GNG4P50150 75 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 RPS20P60866 119 aaKnown RBP3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 RAB14P61106 215 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 RNF212Q495C1 297 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 ORMDL2Q53FV1 153 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 CEND1Q8N111 149 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 C20orf203Q8NBC4 194 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 TYMSOSQ8TAI1 123 aa3.76□□□□□ -1.81
NHLRC3-205ENST00000485407 DERL1Q9BUN8 251 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms