RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 TRAV8-4A0A0B4J246 113 aa10.31□□□□□ -0.76
SIK3-211ENST00000485363 UBE2L6O14933 153 aa10.31□□□□□ -0.76
SIK3-211ENST00000485363 PRSS1P07477 247 aa10.31□□□□□ -0.76
SIK3-211ENST00000485363 AMTP48728 403 aa10.31□□□□□ -0.76
SIK3-211ENST00000485363 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
SIK3-211ENST00000485363 CIRBP-AS1Q8TBR5 109 aa10.31□□□□□ -0.76
SIK3-211ENST00000485363 IGLV10-54A0A075B6I4 117 aa10.3□□□□□ -0.76
SIK3-211ENST00000485363 GATCO43716 136 aaKnown RBP10.3□□□□□ -0.76
SIK3-211ENST00000485363 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
SIK3-211ENST00000485363 LYPD6BQ8NI32 183 aa10.3□□□□□ -0.76
SIK3-211ENST00000485363 DEFB104AQ8WTQ1 72 aa10.3□□□□□ -0.76
SIK3-211ENST00000485363 GTSF1Q8WW33 167 aa10.3□□□□□ -0.76
SIK3-211ENST00000485363 IGLV4-60A0A075B6I1 120 aa10.29□□□□□ -0.76
SIK3-211ENST00000485363 TRAV26-2A0A0B4J265 109 aa10.29□□□□□ -0.76
SIK3-211ENST00000485363 FAM231DQ6ZW35 169 aa10.29□□□□□ -0.76
SIK3-211ENST00000485363 CLRN3Q8NCR9 226 aa10.29□□□□□ -0.76
SIK3-211ENST00000485363 A8MWL6 223 aa10.28□□□□□ -0.76
SIK3-211ENST00000485363 CEBPGP53567 150 aa10.28□□□□□ -0.76
SIK3-211ENST00000485363 C9orf163Q8N9P6 203 aa10.28□□□□□ -0.76
SIK3-211ENST00000485363 TEX261Q6UWH6 196 aa10.27□□□□□ -0.77
SIK3-211ENST00000485363 EIF5A2Q9GZV4 153 aaKnown RBP10.27□□□□□ -0.77
SIK3-211ENST00000485363 GFRA4Q9GZZ7 299 aa10.27□□□□□ -0.77
SIK3-211ENST00000485363 J3QL48 77 aa10.26□□□□□ -0.77
SIK3-211ENST00000485363 CT83Q5H943 113 aa10.26□□□□□ -0.77
SIK3-211ENST00000485363 BORCS7Q96B45 105 aa10.26□□□□□ -0.77
SIK3-211ENST00000485363 RPL39LQ96EH5 51 aaKnown RBP10.26□□□□□ -0.77
SIK3-211ENST00000485363 NCR2O95944 276 aa10.25□□□□□ -0.77
SIK3-211ENST00000485363 FOXA3P55318 350 aaPredicted RBP10.25□□□□□ -0.77
SIK3-211ENST00000485363 SMIM7Q9BQ49 75 aa10.25□□□□□ -0.77
SIK3-211ENST00000485363 hDV102S1A0JD36 115 aa10.24□□□□□ -0.77
SIK3-211ENST00000485363 NDUFS6O75380 124 aaKnown RBP10.24□□□□□ -0.77
SIK3-211ENST00000485363 APCSP02743 223 aa10.23□□□□□ -0.77
SIK3-211ENST00000485363 CNBPP62633 177 aaKnown RBP10.23□□□□□ -0.77
SIK3-211ENST00000485363 AMMECR1LQ6DCA0 310 aa10.23□□□□□ -0.77
SIK3-211ENST00000485363 LINC01551Q86U37 167 aa10.23□□□□□ -0.77
SIK3-211ENST00000485363 FAM210AQ96ND0 272 aa10.23□□□□□ -0.77
SIK3-211ENST00000485363 AP5S1Q9NUS5 200 aa10.23□□□□□ -0.77
SIK3-211ENST00000485363 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
SIK3-211ENST00000485363 ZNF727A8MUV8 499 aa10.22□□□□□ -0.77
SIK3-211ENST00000485363 KRTAP29-1A8MX34 341 aaPredicted RBP10.22□□□□□ -0.77
SIK3-211ENST00000485363 H7C423 109 aa10.22□□□□□ -0.77
SIK3-211ENST00000485363 KRTAP10-4P60372 401 aaPredicted RBP10.22□□□□□ -0.77
SIK3-211ENST00000485363 SDIM1Q6ZPB5 146 aa10.22□□□□□ -0.77
SIK3-211ENST00000485363 TSKUQ8WUA8 353 aa10.22□□□□□ -0.77
SIK3-211ENST00000485363 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.21□□□□□ -0.77
SIK3-211ENST00000485363 IGKV3OR2-268A0A0C4DH90 116 aa10.21□□□□□ -0.77
SIK3-211ENST00000485363 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.77
SIK3-211ENST00000485363 PMCHP20382 165 aa10.21□□□□□ -0.77
SIK3-211ENST00000485363 RNASEKQ6P5S7 137 aaKnown RBP10.21□□□□□ -0.77
SIK3-211ENST00000485363 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.21□□□□□ -0.77
SIK3-211ENST00000485363 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.2□□□□□ -0.78
SIK3-211ENST00000485363 A0A1B0GUT8 65 aa10.2□□□□□ -0.78
SIK3-211ENST00000485363 IGKV2-29A2NJV5 120 aaPredicted RBP10.2□□□□□ -0.78
SIK3-211ENST00000485363 FAM231BA6NCW3 169 aa10.2□□□□□ -0.78
SIK3-211ENST00000485363 GAGE12HA6NDE8 117 aa10.2□□□□□ -0.78
SIK3-211ENST00000485363 HIGD1CA8MV81 97 aa10.2□□□□□ -0.78
SIK3-211ENST00000485363 I3L3M4 83 aa10.2□□□□□ -0.78
SIK3-211ENST00000485363 SRP19P09132 144 aaKnown RBP10.2□□□□□ -0.78
SIK3-211ENST00000485363 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
SIK3-211ENST00000485363 OSTCQ9NRP0 149 aa10.2□□□□□ -0.78
SIK3-211ENST00000485363 IGHV3-64A0A075B6Q5 118 aa10.19□□□□□ -0.78
SIK3-211ENST00000485363 FGF6P10767 208 aa10.19□□□□□ -0.78
SIK3-211ENST00000485363 RPL37AP61513 92 aaKnown RBP10.19□□□□□ -0.78
SIK3-211ENST00000485363 TMEM191AQ9H0A3 160 aa10.19□□□□□ -0.78
SIK3-211ENST00000485363 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
SIK3-211ENST00000485363 PANO1I0J062 215 aa10.18□□□□□ -0.78
SIK3-211ENST00000485363 ZNF25P17030 456 aaPredicted RBP10.18□□□□□ -0.78
SIK3-211ENST00000485363 BTF3L4Q96K17 158 aa10.18□□□□□ -0.78
SIK3-211ENST00000485363 SLPIP03973 132 aa10.17□□□□□ -0.78
SIK3-211ENST00000485363 C15orf56Q8N910 161 aa10.17□□□□□ -0.78
SIK3-211ENST00000485363 CHCHD10Q8WYQ3 142 aaPredicted RBP10.17□□□□□ -0.78
SIK3-211ENST00000485363 TMEM101Q96IK0 257 aa10.17□□□□□ -0.78
SIK3-211ENST00000485363 LRP1Q07954 4544 aaKnown RBP10.17□□□□□ -0.78
SIK3-211ENST00000485363 GAS8-AS1O95177 125 aa10.16□□□□□ -0.78
SIK3-211ENST00000485363 RAB4AP20338 218 aa10.16□□□□□ -0.78
SIK3-211ENST00000485363 CIRBPQ14011 172 aaKnown RBP10.16□□□□□ -0.78
SIK3-211ENST00000485363 FAM74A3Q4VXF1 159 aa10.16□□□□□ -0.78
SIK3-211ENST00000485363 OR5A1Q8NGJ0 315 aa10.16□□□□□ -0.78
SIK3-211ENST00000485363 MRAP2Q96G30 205 aa10.16□□□□□ -0.78
SIK3-211ENST00000485363 RNF185Q96GF1 192 aa10.16□□□□□ -0.78
SIK3-211ENST00000485363 V9GYV3 84 aa10.16□□□□□ -0.78
SIK3-211ENST00000485363 TSHBP01222 138 aa10.15□□□□□ -0.78
SIK3-211ENST00000485363 ESDP10768 282 aa10.15□□□□□ -0.78
SIK3-211ENST00000485363 RIGQ13278 110 aa10.15□□□□□ -0.78
SIK3-211ENST00000485363 TMEM241Q24JQ0 296 aa10.15□□□□□ -0.78
SIK3-211ENST00000485363 AMN1Q8IY45 258 aa10.15□□□□□ -0.78
SIK3-211ENST00000485363 DPH3Q96FX2 82 aa10.15□□□□□ -0.78
SIK3-211ENST00000485363 TMEM242Q9NWH2 141 aa10.15□□□□□ -0.78
SIK3-211ENST00000485363 FAT3Q8TDW7 4589 aa10.15□□□□□ -0.78
SIK3-211ENST00000485363 TRBV27A0A0K0K1C4 114 aa10.14□□□□□ -0.79
SIK3-211ENST00000485363 A0A1B0GVG6 124 aa10.14□□□□□ -0.79
SIK3-211ENST00000485363 OXTP01178 125 aa10.14□□□□□ -0.79
SIK3-211ENST00000485363 POLR2KP53803 58 aaKnown RBP10.14□□□□□ -0.79
SIK3-211ENST00000485363 HIGD2BQ4VC39 106 aa10.14□□□□□ -0.79
SIK3-211ENST00000485363 NUP35Q8NFH5 326 aa10.14□□□□□ -0.79
SIK3-211ENST00000485363 ISOC2Q96AB3 205 aa10.14□□□□□ -0.79
SIK3-211ENST00000485363 PKHD1L1Q86WI1 4243 aa10.14□□□□□ -0.79
SIK3-211ENST00000485363 RPS10P46783 165 aaKnown RBP10.13□□□□□ -0.79
SIK3-211ENST00000485363 NAT8BQ9UHF3 227 aa10.13□□□□□ -0.79
SIK3-211ENST00000485363 GVQW2A0A096LPI5 108 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms