RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 PDE6DO43924 150 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 SRP19P09132 144 aaKnown RBP2.23□□□□□ -2.05
CAPN8-210ENST00000484873 CFC1P0CG37 223 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 IGLC2P0DOY2 106 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 BCL2P10415 239 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 AKR1C3P42330 323 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 MEOX2P50222 304 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 UBE2G1P62253 170 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 GNG5P63218 68 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 MEF2BQ02080 365 aaPredicted RBP2.23□□□□□ -2.05
CAPN8-210ENST00000484873 ERCC8Q13216 396 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 PSG3Q16557 428 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 RNF182Q8N6D2 247 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 ZNF738Q8NE65 137 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 RPL36ALQ969Q0 106 aaKnown RBP2.23□□□□□ -2.05
CAPN8-210ENST00000484873 RPUSD4Q96CM3 377 aaKnown RBP2.23□□□□□ -2.05
CAPN8-210ENST00000484873 PRAC1Q96KF2 57 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 LINC00479Q96M42 142 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 C20orf144Q9BQM9 153 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 SLC50A1Q9BRV3 221 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 SMDT1Q9H4I9 107 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 ZNF331Q9NQX6 463 aaPredicted RBP2.23□□□□□ -2.05
CAPN8-210ENST00000484873 OTORQ9NRC9 128 aa2.23□□□□□ -2.05
CAPN8-210ENST00000484873 IGKV2-40A0A087WW87 121 aaPredicted RBP2.22□□□□□ -2.05
CAPN8-210ENST00000484873 TRGV1A0A0A0MS02 117 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 TRAV8-2A0A0B4J237 113 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 TRGV4A0A0C4DH28 118 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 TRBV7-9A0A0J9YWB2 115 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 TMEM218A2RU14 115 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 ZNF727A8MUV8 499 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 M0R3E3 92 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 PEX7O00628 323 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 SOCS3O14543 225 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 ZNF253O75346 499 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 IGKV2D-40P01614 121 aaPredicted RBP2.22□□□□□ -2.05
CAPN8-210ENST00000484873 IGHV3-53P01767 116 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 SFTA3P0C7M3 94 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 MGST1P10620 155 aaKnown RBP2.22□□□□□ -2.05
CAPN8-210ENST00000484873 LEPP41159 167 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 UBE2D1P51668 147 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 HIST1H1AQ02539 215 aaPredicted RBP2.22□□□□□ -2.05
CAPN8-210ENST00000484873 PDE6HQ13956 83 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 TMEM241Q24JQ0 296 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 GOLT1AQ6ZVE7 132 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 PRNTQ86SH4 94 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 BAGE2Q86Y30 109 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 EIF4E3Q8N5X7 224 aaKnown RBP2.22□□□□□ -2.05
CAPN8-210ENST00000484873 STPG4Q8N801 248 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 CYB561D1Q8N8Q1 229 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 HIST1H2BAQ96A08 127 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 LINC00477Q96M19 166 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 PSG8Q9UQ74 426 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 URGCP-MRPS24S4R325 110 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 ARL2-SNX15V9GYD0 113 aa2.22□□□□□ -2.05
CAPN8-210ENST00000484873 IGHV3-64A0A075B6Q5 118 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 KRBOX1C9JBD0 128 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 TMEM250H0YL14 139 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 M0R036 132 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 APOC3P02656 99 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 TCRAP04437 139 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 S100A1P23297 94 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 RPL35P42766 123 aaKnown RBP2.21□□□□□ -2.06
CAPN8-210ENST00000484873 GNG4P50150 75 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 FLI1Q01543 452 aaPredicted RBP2.21□□□□□ -2.06
CAPN8-210ENST00000484873 TWIST1Q15672 202 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 ADIRFQ15847 76 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 KRTAP19-2Q3LHN2 52 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 KIAA1644Q3SXP7 199 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 SAPCD1Q5SSQ6 148 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 TMEM78Q5T7P6 136 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 FER1L6-AS1Q8NA97 138 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 OR8A1Q8NGG7 326 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 C11orf52Q96A22 123 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 TVP23CQ96ET8 276 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 SMIM7Q9BQ49 75 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 NDFIP1Q9BT67 221 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 SEC11CQ9BY50 192 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 AGPAT4-IT1Q9H0P7 198 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 PARLQ9H300 379 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 NAT8Q9UHE5 227 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 ZFP30Q9Y2G7 519 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 KMT2DO14686 5537 aa2.21□□□□□ -2.06
CAPN8-210ENST00000484873 IGLV7-46A0A075B6I9 117 aa2.2□□□□□ -2.06
CAPN8-210ENST00000484873 RBAKDNA6NC62 111 aa2.2□□□□□ -2.06
CAPN8-210ENST00000484873 FABP5P3A8MUU1 101 aa2.2□□□□□ -2.06
CAPN8-210ENST00000484873 GATCO43716 136 aaKnown RBP2.2□□□□□ -2.06
CAPN8-210ENST00000484873 NDUFS6O75380 124 aaKnown RBP2.2□□□□□ -2.06
CAPN8-210ENST00000484873 GPX1P07203 203 aa2.2□□□□□ -2.06
CAPN8-210ENST00000484873 PRSS1P07477 247 aa2.2□□□□□ -2.06
CAPN8-210ENST00000484873 CT45A10P0DMU9 189 aa2.2□□□□□ -2.06
CAPN8-210ENST00000484873 GATA1P15976 413 aaPredicted RBP2.2□□□□□ -2.06
CAPN8-210ENST00000484873 RNASE4P34096 147 aaKnown RBP2.2□□□□□ -2.06
CAPN8-210ENST00000484873 ZNF138P52744 262 aa2.2□□□□□ -2.06
CAPN8-210ENST00000484873 RPL23P62829 140 aaKnown RBP2.2□□□□□ -2.06
CAPN8-210ENST00000484873 SMUG1Q53HV7 270 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms