RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 HLA-DRB4X5D2U9 266 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 TRAV2A0A0B4J234 112 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 RBAKDNA6NC62 111 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 J3QQQ9 107 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 PEX7O00628 323 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 DEFB4AO15263 64 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 PFN2P35080 140 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 DGAT2L7PQ6IED9 249 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 TMEM136Q6ZRR5 245 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 C11orf45Q8TAV5 145 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 DSCR8Q96T75 97 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 PMCHL2Q9BQD1 86 aa3.92□□□□□ -1.78
CNTN4-216ENST00000484686 TRAV12-3A0A0B4J271 114 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 K7EMI3 77 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 SPRY2O43597 315 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 RNASE4P34096 147 aaKnown RBP3.91□□□□□ -1.78
CNTN4-216ENST00000484686 C8orf49Q96NF6 230 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 TMEM70Q9BUB7 260 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 ZMAT4Q9H898 229 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 KLF12Q9Y4X4 402 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 TENM2Q9NT68 2774 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 TMSB15BA0A087X1C1 80 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 SPINK4O60575 86 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 GIG44P09565 113 aaPredicted RBP3.91□□□□□ -1.78
CNTN4-216ENST00000484686 PRR9Q5T870 116 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 DPH3Q96FX2 82 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 DUSP14O95147 198 aaKnown RBP3.91□□□□□ -1.78
CNTN4-216ENST00000484686 COX8AP10176 69 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 MGST1P10620 155 aaKnown RBP3.91□□□□□ -1.78
CNTN4-216ENST00000484686 ZNF138P52744 262 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 CMC4P56277 68 aaPredicted RBP3.91□□□□□ -1.78
CNTN4-216ENST00000484686 GAGE2AQ6NT46 116 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 LINC01561Q8N1V8 128 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 TMEM75Q8N9X5 138 aa3.91□□□□□ -1.78
CNTN4-216ENST00000484686 RBMY1A1P0DJD3 496 aaKnown RBP3.9□□□□□ -1.78
CNTN4-216ENST00000484686 RBMY1CP0DJD4 496 aa3.9□□□□□ -1.78
CNTN4-216ENST00000484686 GCSHP23434 173 aa3.9□□□□□ -1.78
CNTN4-216ENST00000484686 RBMY1FQ15415 496 aaKnown RBP3.9□□□□□ -1.78
CNTN4-216ENST00000484686 C9orf85Q96MD7 179 aa3.9□□□□□ -1.78
CNTN4-216ENST00000484686 ZNF492Q9P255 531 aa3.9□□□□□ -1.78
CNTN4-216ENST00000484686 CSMD3Q7Z407 3707 aa3.9□□□□□ -1.79
CNTN4-216ENST00000484686 TRBV20OR9-2A0A075B6H5 130 aa3.9□□□□□ -1.79
CNTN4-216ENST00000484686 NPIPB6E9PJ23 425 aa3.9□□□□□ -1.79
CNTN4-216ENST00000484686 CRXO43186 299 aaPredicted RBP3.9□□□□□ -1.79
CNTN4-216ENST00000484686 FGF6P10767 208 aa3.9□□□□□ -1.79
CNTN4-216ENST00000484686 ZNF80P51504 273 aaPredicted RBP3.9□□□□□ -1.79
CNTN4-216ENST00000484686 C9orf47Q6ZRZ4 202 aa3.9□□□□□ -1.79
CNTN4-216ENST00000484686 C3orf22Q8N5N4 141 aa3.9□□□□□ -1.79
CNTN4-216ENST00000484686 PPDPFLQ8WWR9 84 aa3.9□□□□□ -1.79
CNTN4-216ENST00000484686 FAM19A4Q96LR4 140 aa3.9□□□□□ -1.79
CNTN4-216ENST00000484686 FXYD2P54710 66 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 APOC4P55056 127 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 Q6Q795 121 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 LINC00322Q6ZN03 302 aaPredicted RBP3.89□□□□□ -1.79
CNTN4-216ENST00000484686 LINC00173Q6ZV60 143 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 ZFAND2AQ8N6M9 145 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 ATP6V0E2Q8NHE4 81 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 HHLA3Q9XRX5 114 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 A8MWL6 223 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 CENPWQ5EE01 88 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 ZNF493Q6ZR52 646 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 TMEM191AQ9H0A3 160 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 NHP2Q9NX24 153 aaKnown RBP3.89□□□□□ -1.79
CNTN4-216ENST00000484686 E9PLD3 99 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 Q86TA4 180 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 C1orf158Q8N1D5 194 aa3.89□□□□□ -1.79
CNTN4-216ENST00000484686 TIMM8BQ9Y5J9 83 aaPredicted RBP3.89□□□□□ -1.79
CNTN4-216ENST00000484686 IGLL5B9A064 214 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 CRIP1P50238 77 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 FOXA3P55318 350 aaPredicted RBP3.88□□□□□ -1.79
CNTN4-216ENST00000484686 CSNK1G2-AS1Q8NCQ2 148 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 FMC1Q96HJ9 113 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 GNRH2O43555 120 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 LTAP01374 205 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 P01737 135 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 CFAP126Q5VTH2 177 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 PCP2Q8IVA1 136 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 C15orf53Q8NAA6 179 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 OVOL2Q9BRP0 275 aa3.88□□□□□ -1.79
CNTN4-216ENST00000484686 HUWE1Q7Z6Z7 4374 aaKnown RBP3.87□□□□□ -1.79
CNTN4-216ENST00000484686 KLLNB2CW77 178 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 H7C1H1 209 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 INSP01308 110 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 XP32Q5T750 250 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 IGF2BP2-AS1Q96M15 143 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 C11orf21Q9P2W6 132 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 DNAH9Q9NYC9 4486 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 NACAE9PAV3 2078 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 UQCRQO14949 82 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 LEPP41159 167 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 MORN3Q6PF18 240 aaPredicted RBP3.87□□□□□ -1.79
CNTN4-216ENST00000484686 PHLDA1Q8WV24 401 aaPredicted RBP3.87□□□□□ -1.79
CNTN4-216ENST00000484686 B9D2Q9BPU9 175 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 TXNDC17Q9BRA2 123 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 CYSTM1Q9H1C7 97 aa3.87□□□□□ -1.79
CNTN4-216ENST00000484686 hADV29S1A0JD25 119 aa3.86□□□□□ -1.79
CNTN4-216ENST00000484686 IGLV2-8P01709 118 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms