RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 PROK1P58294 105 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 SAMD5Q5TGI4 173 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 HIST2H2BCQ6DN03 193 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 C1orf158Q8N1D5 194 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 TMEM263Q8WUH6 116 aaKnown RBP5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 PHLDA1Q8WV24 401 aaPredicted RBP5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 PLEKHB2Q96CS7 222 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 AMELXQ99217 191 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 C1QTNF4Q9BXJ3 329 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 SPANXB1Q9NS25 103 aaPredicted RBP5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 PGPEP1Q9NXJ5 209 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 KMT2BQ9UMN6 2715 aaPredicted RBP5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 TLN2Q9Y4G6 2542 aa5.35□□□□□ -1.55
SHROOM3-206ENST00000484236 TMEM223A0PJW6 202 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 LEPROTO15243 131 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 SAP30O75446 220 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 FOSL1P15407 271 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 MRPS36P82909 103 aaKnown RBP5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 SMAGPQ0VAQ4 97 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 DAZ2Q13117 558 aaKnown RBP5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 C12orf74Q32Q52 190 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 TMEM170BQ5T4T1 132 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 NDUFA11Q86Y39 141 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 C11orf44Q8N8P7 122 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 ZNRF2Q8NHG8 242 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 RNASE8Q8TDE3 154 aaKnown RBP5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 TIMM21Q9BVV7 248 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 NHP2Q9NX24 153 aaKnown RBP5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 XCL2Q9UBD3 114 aa5.34□□□□□ -1.55
SHROOM3-206ENST00000484236 CSMD2Q7Z408 3487 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 PDZD2O15018 2839 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 IGHV3-73A0A0B4J1V6 119 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 TRAV4A0A0B4J268 109 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 A0A0J9YY99 117 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 GAGE12BA1L429 117 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 ADARB2-AS1A8MUL3 147 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 J3QQQ9 107 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 LGALS3P17931 250 aaKnown RBP5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 AZU1P20160 251 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 COTL1Q14019 142 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 RAB37Q96AX2 223 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 C16orf74Q96GX8 76 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 CHCHD7Q9BUK0 85 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 MRPL16Q9NX20 251 aaKnown RBP5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 SPCS1Q9Y6A9 102 aa5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 SONP18583 2426 aaKnown RBP5.33□□□□□ -1.56
SHROOM3-206ENST00000484236 CCDC168Q8NDH2 2452 aa5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 IGLL5B9A064 214 aa5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 ZNF22P17026 224 aaPredicted RBP5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 Q6ZSN1 163 aa5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 DAZ4Q86SG3 579 aaKnown RBP5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 SLC25A29Q8N8R3 303 aa5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 OVOL2Q9BRP0 275 aa5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 DAZ3Q9NR90 486 aaKnown RBP5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 C19orf73Q9NVV2 129 aa5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 UBE2D4Q9Y2X8 147 aa5.32□□□□□ -1.56
SHROOM3-206ENST00000484236 TRGV1A0A0A0MS02 117 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 TINCRA0A1B0GVN0 87 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 PRM2P04554 102 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 UBE2D1P51668 147 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 EMP1P54849 157 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 RPL36AP83881 106 aaKnown RBP5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 RRN3P1Q2M238 152 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 DEFB104AQ8WTQ1 72 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 RPL36ALQ969Q0 106 aaKnown RBP5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 FAM104AQ969W3 186 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 ZNF479Q96JC4 524 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 OPRPNQ99935 248 aaPredicted RBP5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 CBY1Q9Y3M2 126 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 CSDC2Q9Y534 153 aaKnown RBP5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 WNK1Q9H4A3 2382 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 TENM4Q6N022 2769 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 CHD6Q8TD26 2715 aa5.31□□□□□ -1.56
SHROOM3-206ENST00000484236 IGHV3OR16-12A0A075B7B8 117 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 A0A0J9YXV3 536 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 K7EQD1 137 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 K7ERJ3 54 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 K7ERU9 68 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 GIG44P09565 113 aaPredicted RBP5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 INSL3P51460 131 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 TIRAPP58753 221 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 TSPEAR-AS2P59090 65 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 LYRM7Q5U5X0 104 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 HIST2H2BDQ6DRA6 164 aa5.3□□□□□ -1.56
SHROOM3-206ENST00000484236 IGLV5-45A0A087WSX0 123 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 IGHV1-58A0A0C4DH39 117 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 TRBV6-4A0A1B0GX49 114 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 TMEM238C9JI98 176 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 H7C423 109 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 LY6G6DO95868 133 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 IGHV3-30P01768 117 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 PF4P02776 101 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 IGHV3-30-5P0DP03 117 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 UBE2D3P61077 147 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 UBE2D2P62837 147 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 OCIAD2Q56VL3 154 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 DGAT2L7PQ6IED9 249 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 FAM19A3Q7Z5A8 133 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms