RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
RFTN1-209ENST00000483671 TENM3Q9P273 2699 aa11.37□□□□□ -0.59
RFTN1-209ENST00000483671 ATP5LO75964 103 aa11.36□□□□□ -0.59
RFTN1-209ENST00000483671 COTL1Q14019 142 aa11.36□□□□□ -0.59
RFTN1-209ENST00000483671 C20orf203Q8NBC4 194 aa11.36□□□□□ -0.59
RFTN1-209ENST00000483671 MAP1LC3CQ9BXW4 147 aa11.36□□□□□ -0.59
RFTN1-209ENST00000483671 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
RFTN1-209ENST00000483671 CYSLTR1Q9Y271 337 aa11.36□□□□□ -0.59
RFTN1-209ENST00000483671 LOC100131303A0A0U1RQF7 123 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 PAX4O43316 350 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 KRTDAPP60985 99 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 IFI27L1Q96BM0 104 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 VSIG2Q96IQ7 327 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 HUWE1Q7Z6Z7 4374 aaKnown RBP11.35□□□□□ -0.59
RFTN1-209ENST00000483671 H3BNG1 76 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 SYS1-DBNDD2H3BUS1 97 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 GYPEP15421 78 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 TMEM97Q5BJF2 176 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 PET117Q6UWS5 81 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 ERASQ7Z444 233 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 Q8N976 141 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 C11orf45Q8TAV5 145 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 PHLDA1Q8WV24 401 aaPredicted RBP11.35□□□□□ -0.59
RFTN1-209ENST00000483671 CHCHD7Q9BUK0 85 aa11.35□□□□□ -0.59
RFTN1-209ENST00000483671 TRAV26-1A0A087WT03 109 aa11.34□□□□□ -0.59
RFTN1-209ENST00000483671 IGIPA6NJ69 53 aa11.34□□□□□ -0.59
RFTN1-209ENST00000483671 F5H768 121 aa11.34□□□□□ -0.59
RFTN1-209ENST00000483671 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
RFTN1-209ENST00000483671 IGHV3-38A0A0C4DH36 116 aa11.33□□□□□ -0.6
RFTN1-209ENST00000483671 NPSP0C0P6 89 aa11.33□□□□□ -0.6
RFTN1-209ENST00000483671 NHLRC4P0CG21 123 aaPredicted RBP11.33□□□□□ -0.6
RFTN1-209ENST00000483671 Q6ZTC4 211 aa11.33□□□□□ -0.6
RFTN1-209ENST00000483671 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
RFTN1-209ENST00000483671 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.32□□□□□ -0.6
RFTN1-209ENST00000483671 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
RFTN1-209ENST00000483671 SH2D6Q7Z4S9 175 aa11.32□□□□□ -0.6
RFTN1-209ENST00000483671 LINC00518Q8N0U6 118 aa11.32□□□□□ -0.6
RFTN1-209ENST00000483671 TMEM141Q96I45 108 aa11.32□□□□□ -0.6
RFTN1-209ENST00000483671 PYGO1Q9Y3Y4 419 aa11.32□□□□□ -0.6
RFTN1-209ENST00000483671 DNAH9Q9NYC9 4486 aa11.31□□□□□ -0.6
RFTN1-209ENST00000483671 RPL39P62891 51 aaKnown RBP11.31□□□□□ -0.6
RFTN1-209ENST00000483671 LINC01545Q5VT33 79 aa11.31□□□□□ -0.6
RFTN1-209ENST00000483671 ATP6V0E2Q8NHE4 81 aa11.31□□□□□ -0.6
RFTN1-209ENST00000483671 DEFB104AQ8WTQ1 72 aa11.31□□□□□ -0.6
RFTN1-209ENST00000483671 C20orf202A1L168 122 aa11.3□□□□□ -0.6
RFTN1-209ENST00000483671 SCGB1D1O95968 90 aa11.3□□□□□ -0.6
RFTN1-209ENST00000483671 HTN3P15516 51 aa11.3□□□□□ -0.6
RFTN1-209ENST00000483671 NANOS2P60321 138 aaKnown RBP11.3□□□□□ -0.6
RFTN1-209ENST00000483671 MRPL23Q16540 153 aaKnown RBP11.3□□□□□ -0.6
RFTN1-209ENST00000483671 TIMM21Q9BVV7 248 aa11.3□□□□□ -0.6
RFTN1-209ENST00000483671 SPANXA1Q9NS26 97 aa11.3□□□□□ -0.6
RFTN1-209ENST00000483671 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
RFTN1-209ENST00000483671 A0A0J9YY99 117 aa11.29□□□□□ -0.6
RFTN1-209ENST00000483671 H7C423 109 aa11.29□□□□□ -0.6
RFTN1-209ENST00000483671 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
RFTN1-209ENST00000483671 TRBV25-1A0A075B6N4 114 aa11.28□□□□□ -0.6
RFTN1-209ENST00000483671 TRBV6-8A0A0A6YYG3 113 aa11.28□□□□□ -0.6
RFTN1-209ENST00000483671 DEFA6Q01524 100 aa11.28□□□□□ -0.6
RFTN1-209ENST00000483671 Q6ZN92 141 aa11.28□□□□□ -0.6
RFTN1-209ENST00000483671 MRPL52Q86TS9 123 aaKnown RBP11.28□□□□□ -0.6
RFTN1-209ENST00000483671 C12orf57Q99622 126 aa11.28□□□□□ -0.6
RFTN1-209ENST00000483671 ICOSQ9Y6W8 199 aa11.28□□□□□ -0.6
RFTN1-209ENST00000483671 SMAGPQ0VAQ4 97 aa11.27□□□□□ -0.61
RFTN1-209ENST00000483671 TEX43Q6ZNM6 134 aa11.27□□□□□ -0.61
RFTN1-209ENST00000483671 BAALCQ8WXS3 180 aa11.27□□□□□ -0.61
RFTN1-209ENST00000483671 TMEM243Q9BU79 118 aa11.27□□□□□ -0.61
RFTN1-209ENST00000483671 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.61
RFTN1-209ENST00000483671 CSDC2Q9Y534 153 aaKnown RBP11.27□□□□□ -0.61
RFTN1-209ENST00000483671 DEFB131BA0A096LNP1 70 aa11.26□□□□□ -0.61
RFTN1-209ENST00000483671 TRAV10A0A0B4J240 114 aa11.26□□□□□ -0.61
RFTN1-209ENST00000483671 PRSS1P07477 247 aa11.26□□□□□ -0.61
RFTN1-209ENST00000483671 TIRAPP58753 221 aa11.26□□□□□ -0.61
RFTN1-209ENST00000483671 ODF1Q14990 250 aa11.26□□□□□ -0.61
RFTN1-209ENST00000483671 PAPPA-AS1Q5QFB9 102 aa11.26□□□□□ -0.61
RFTN1-209ENST00000483671 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
RFTN1-209ENST00000483671 A0A087WX48 190 aa11.25□□□□□ -0.61
RFTN1-209ENST00000483671 A0A096LPF7 62 aa11.25□□□□□ -0.61
RFTN1-209ENST00000483671 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
RFTN1-209ENST00000483671 MRPS36P82909 103 aaKnown RBP11.25□□□□□ -0.61
RFTN1-209ENST00000483671 FAM104AQ969W3 186 aa11.25□□□□□ -0.61
RFTN1-209ENST00000483671 IGLV4-3A0A075B6K6 122 aa11.24□□□□□ -0.61
RFTN1-209ENST00000483671 CDPF1Q6NVV7 123 aa11.24□□□□□ -0.61
RFTN1-209ENST00000483671 MEGF8Q7Z7M0 2845 aa11.23□□□□□ -0.61
RFTN1-209ENST00000483671 H0Y8G0 127 aa11.23□□□□□ -0.61
RFTN1-209ENST00000483671 FGF6P10767 208 aa11.23□□□□□ -0.61
RFTN1-209ENST00000483671 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
RFTN1-209ENST00000483671 PMVKQ15126 192 aa11.23□□□□□ -0.61
RFTN1-209ENST00000483671 AMELXQ99217 191 aa11.23□□□□□ -0.61
RFTN1-209ENST00000483671 PRSS29PA6NIE9 313 aa11.22□□□□□ -0.61
RFTN1-209ENST00000483671 CST9LQ9H4G1 147 aa11.22□□□□□ -0.61
RFTN1-209ENST00000483671 F8VRH5 84 aa11.21□□□□□ -0.61
RFTN1-209ENST00000483671 UBE2L6O14933 153 aa11.21□□□□□ -0.61
RFTN1-209ENST00000483671 PRKDCP78527 4128 aaKnown RBP11.21□□□□□ -0.62
RFTN1-209ENST00000483671 STAB2Q8WWQ8 2551 aa11.21□□□□□ -0.62
RFTN1-209ENST00000483671 S100A12P80511 92 aa11.2□□□□□ -0.62
RFTN1-209ENST00000483671 LELP1Q5T871 98 aa11.2□□□□□ -0.62
RFTN1-209ENST00000483671 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
RFTN1-209ENST00000483671 OPRPNQ99935 248 aaPredicted RBP11.2□□□□□ -0.62
RFTN1-209ENST00000483671 VCX2Q9H322 139 aa11.2□□□□□ -0.62
RFTN1-209ENST00000483671 COL7A1Q02388 2944 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms