RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 CACNA1CQ13936 2221 aa0.34□□□□□ -2.35
NSMCE4A-210ENST00000483541 NCOR2Q9Y618 2525 aa0.34□□□□□ -2.35
NSMCE4A-210ENST00000483541 PPP1R17O96001 155 aa0.34□□□□□ -2.36
NSMCE4A-210ENST00000483541 CCL18P55774 89 aa0.34□□□□□ -2.36
NSMCE4A-210ENST00000483541 C10orf128Q5T292 105 aa0.34□□□□□ -2.36
NSMCE4A-210ENST00000483541 PPIP5K1Q6PFW1 1433 aa0.34□□□□□ -2.36
NSMCE4A-210ENST00000483541 IGSF10Q6WRI0 2623 aa0.34□□□□□ -2.36
NSMCE4A-210ENST00000483541 R4GMQ9 66 aa0.34□□□□□ -2.36
NSMCE4A-210ENST00000483541 ZNF609O15014 1411 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 EFCAB10A6NFE3 127 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 G3V318 75 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 Q56UQ5 140 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 CFAP126Q5VTH2 177 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 Q5VV11 94 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 RPL13AP3Q6NVV1 102 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 TTC9CQ8N5M4 171 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 FAM213BQ8TBF2 198 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 PPP3R2Q96LZ3 170 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 PLCE1Q9P212 2302 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 MRC1P22897 1456 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 WNK3Q9BYP7 1800 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 ZMYM4Q5VZL5 1548 aa0.33□□□□□ -2.36
NSMCE4A-210ENST00000483541 ROCK2O75116 1388 aaKnown RBP0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 KTN1Q86UP2 1357 aaKnown RBP0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 EIF4G3O43432 1585 aaKnown RBP0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 PIN1P1O15428 100 aa0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 APOC2P02655 101 aa0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 AKAIN1P0CW23 69 aa0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 CATR1Q13166 79 aa0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 NPVFQ9HCQ7 196 aa0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 LENEPQ9Y5L5 61 aa0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 QRICH2Q9H0J4 1663 aa0.32□□□□□ -2.36
NSMCE4A-210ENST00000483541 CPSF1Q10570 1443 aaKnown RBP0.31□□□□□ -2.36
NSMCE4A-210ENST00000483541 SPINK1P00995 79 aa0.31□□□□□ -2.36
NSMCE4A-210ENST00000483541 Q5BKY6 102 aa0.31□□□□□ -2.36
NSMCE4A-210ENST00000483541 V9GYH0 126 aa0.31□□□□□ -2.36
NSMCE4A-210ENST00000483541 KDM3BQ7LBC6 1761 aa0.31□□□□□ -2.36
NSMCE4A-210ENST00000483541 GPR98Q8WXG9 6306 aa0.31□□□□□ -2.36
NSMCE4A-210ENST00000483541 C2CD3Q4AC94 2353 aa0.31□□□□□ -2.36
NSMCE4A-210ENST00000483541 LRRC37A2A6NM11 1700 aa0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 A2ML1A8K2U0 1454 aa0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 CTXND1A0A1B0GTU2 59 aa0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 ZNF815PA8K554 130 aa0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 IFNGP01579 166 aa0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 SPAG11BQ08648 103 aa0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 SPAG11AQ6PDA7 123 aa0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 SSBP3-AS1Q7Z2R9 100 aa0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 C8orf59Q8N0T1 100 aaPredicted RBP0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 SMIM4Q8WVI0 70 aa0.3□□□□□ -2.36
NSMCE4A-210ENST00000483541 NCOR1O75376 2440 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 PLXNB2O15031 1838 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 PSME4Q14997 1843 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 SBF2Q86WG5 1849 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 SHROOM2Q13796 1616 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 LOC100130705A0A1B0GUX0 176 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 M0R135 149 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 PP6455Q8WZ26 134 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 CYP4F30PQ9H0H9 118 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 SCN3BQ9NY72 215 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 UNC79Q9P2D8 2635 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 DOPEY2Q9Y3R5 2298 aa0.29□□□□□ -2.36
NSMCE4A-210ENST00000483541 UBR5O95071 2799 aaPredicted RBP0.28□□□□□ -2.36
NSMCE4A-210ENST00000483541 CELSR2Q9HCU4 2923 aa0.28□□□□□ -2.36
NSMCE4A-210ENST00000483541 KIF21AQ7Z4S6 1674 aa0.28□□□□□ -2.36
NSMCE4A-210ENST00000483541 ROBO1Q9Y6N7 1651 aa0.28□□□□□ -2.36
NSMCE4A-210ENST00000483541 A0A0D9SFI3 127 aa0.28□□□□□ -2.36
NSMCE4A-210ENST00000483541 SPINK8P0C7L1 97 aa0.28□□□□□ -2.36
NSMCE4A-210ENST00000483541 MRPL54Q6P161 138 aaKnown RBP0.28□□□□□ -2.36
NSMCE4A-210ENST00000483541 ZNF236Q9UL36 1845 aa0.28□□□□□ -2.36
NSMCE4A-210ENST00000483541 MYOM2P54296 1465 aa0.28□□□□□ -2.37
NSMCE4A-210ENST00000483541 DMBT1Q9UGM3 2413 aaPredicted RBP0.27□□□□□ -2.37
NSMCE4A-210ENST00000483541 SSSCA1O60232 199 aa0.27□□□□□ -2.37
NSMCE4A-210ENST00000483541 SNAPC5O75971 98 aa0.27□□□□□ -2.37
NSMCE4A-210ENST00000483541 COX17Q14061 63 aa0.27□□□□□ -2.37
NSMCE4A-210ENST00000483541 C9orf153Q5TBE3 101 aa0.27□□□□□ -2.37
NSMCE4A-210ENST00000483541 MGST2Q99735 147 aa0.27□□□□□ -2.37
NSMCE4A-210ENST00000483541 CNFNQ9BYD5 112 aa0.27□□□□□ -2.37
NSMCE4A-210ENST00000483541 PRO0255Q9UI72 69 aa0.27□□□□□ -2.37
NSMCE4A-210ENST00000483541 BIVM-ERCC5R4GMW8 1640 aa0.27□□□□□ -2.37
NSMCE4A-210ENST00000483541 AKAP6Q13023 2319 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 DLEU1O43261 78 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 TPPP2P59282 170 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 COMMD6Q7Z4G1 85 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 C5orf38Q86SI9 138 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 MYOZ3Q8TDC0 251 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 SPANXDQ9BXN6 97 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 DYNLRB1Q9NP97 96 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 NDUFA4L2Q9NRX3 87 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 SMG6Q86US8 1419 aaKnown RBP0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 RIMS1Q86UR5 1692 aaKnown RBP0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 HIVEP3Q5T1R4 2406 aa0.26□□□□□ -2.37
NSMCE4A-210ENST00000483541 ZNF292O60281 2723 aa0.25□□□□□ -2.37
NSMCE4A-210ENST00000483541 TRBV7-3A0A075B6L6 115 aa0.25□□□□□ -2.37
NSMCE4A-210ENST00000483541 A0A1B0GV90 55 aa0.25□□□□□ -2.37
NSMCE4A-210ENST00000483541 TNFP01375 233 aa0.25□□□□□ -2.37
NSMCE4A-210ENST00000483541 APOC3P02656 99 aa0.25□□□□□ -2.37
NSMCE4A-210ENST00000483541 S100A3P33764 101 aa0.25□□□□□ -2.37
NSMCE4A-210ENST00000483541 HAMPP81172 84 aa0.25□□□□□ -2.37
NSMCE4A-210ENST00000483541 PTPRQQ9UMZ3 2332 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms