RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
CPNE1-225ENST00000483495 IGLV4-69A0A075B6H9 119 aa9.47□□□□□ -0.89
CPNE1-225ENST00000483495 PAPPA-AS1Q5QFB9 102 aa9.47□□□□□ -0.89
CPNE1-225ENST00000483495 VWFP04275 2813 aa9.46□□□□□ -0.89
CPNE1-225ENST00000483495 NPSP0C0P6 89 aa9.46□□□□□ -0.9
CPNE1-225ENST00000483495 BVES-AS1Q5T3Y7 98 aa9.46□□□□□ -0.9
CPNE1-225ENST00000483495 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.9
CPNE1-225ENST00000483495 K7EQD1 137 aa9.45□□□□□ -0.9
CPNE1-225ENST00000483495 IGLV4-3A0A075B6K6 122 aa9.45□□□□□ -0.9
CPNE1-225ENST00000483495 TRBV7-3A0A075B6L6 115 aa9.45□□□□□ -0.9
CPNE1-225ENST00000483495 CRYBA4P53673 196 aa9.45□□□□□ -0.9
CPNE1-225ENST00000483495 ORAOV1Q8WV07 137 aa9.45□□□□□ -0.9
CPNE1-225ENST00000483495 GAGE12BA1L429 117 aa9.44□□□□□ -0.9
CPNE1-225ENST00000483495 GAGE7O76087 117 aa9.44□□□□□ -0.9
CPNE1-225ENST00000483495 GAGE12FP0CL80 117 aa9.44□□□□□ -0.9
CPNE1-225ENST00000483495 GAGE12GP0CL81 117 aa9.44□□□□□ -0.9
CPNE1-225ENST00000483495 GAGE12IP0CL82 117 aa9.44□□□□□ -0.9
CPNE1-225ENST00000483495 COTL1Q14019 142 aa9.44□□□□□ -0.9
CPNE1-225ENST00000483495 KIR2DL5BQ8NHK3 375 aa9.44□□□□□ -0.9
CPNE1-225ENST00000483495 HIGD1BQ9P298 99 aa9.44□□□□□ -0.9
CPNE1-225ENST00000483495 TEP1Q99973 2627 aaKnown RBP9.43□□□□□ -0.9
CPNE1-225ENST00000483495 SMIM9A6NGZ8 99 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 C11orf86A6NJI1 115 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 E9PLD3 99 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 SEC11AP67812 179 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 KRTAP24-1Q3LI83 254 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 TMEM97Q5BJF2 176 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 LINC00612Q8N6U2 182 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 SLC25A29Q8N8R3 303 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 FAM104AQ969W3 186 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 OPRPNQ99935 248 aaPredicted RBP9.43□□□□□ -0.9
CPNE1-225ENST00000483495 X6R8D5 127 aa9.43□□□□□ -0.9
CPNE1-225ENST00000483495 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 RPL36AP83881 106 aaKnown RBP9.42□□□□□ -0.9
CPNE1-225ENST00000483495 NFE4Q86UQ8 179 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 RPL36ALQ969Q0 106 aaKnown RBP9.42□□□□□ -0.9
CPNE1-225ENST00000483495 AMELXQ99217 191 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 TTTY13Q9BZ97 58 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 SPANXA1Q9NS26 97 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 COX11Q9Y6N1 276 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 ATRQ13535 2644 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 IGHV3-38A0A0C4DH36 116 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 UBE2D3P61077 147 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 UBE2D2P62837 147 aa9.42□□□□□ -0.9
CPNE1-225ENST00000483495 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
CPNE1-225ENST00000483495 PHLDA1Q8WV24 401 aaPredicted RBP9.42□□□□□ -0.9
CPNE1-225ENST00000483495 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
CPNE1-225ENST00000483495 HSD52Q0P140 79 aa9.41□□□□□ -0.9
CPNE1-225ENST00000483495 MAPKAPK5-AS1Q8N8E1 139 aa9.41□□□□□ -0.9
CPNE1-225ENST00000483495 VCX2Q9H322 139 aa9.41□□□□□ -0.9
CPNE1-225ENST00000483495 UBE2D4Q9Y2X8 147 aa9.41□□□□□ -0.9
CPNE1-225ENST00000483495 TRBV25-1A0A075B6N4 114 aa9.4□□□□□ -0.9
CPNE1-225ENST00000483495 APOC4P55056 127 aa9.4□□□□□ -0.9
CPNE1-225ENST00000483495 OR11H2Q8NH07 326 aa9.4□□□□□ -0.9
CPNE1-225ENST00000483495 TRAV8-6A0A0B4J262 113 aa9.4□□□□□ -0.91
CPNE1-225ENST00000483495 EMP1P54849 157 aa9.4□□□□□ -0.91
CPNE1-225ENST00000483495 PRADC1Q9BSG0 188 aa9.4□□□□□ -0.91
CPNE1-225ENST00000483495 TIMM21Q9BVV7 248 aa9.4□□□□□ -0.91
CPNE1-225ENST00000483495 NOTCH3Q9UM47 2321 aa9.4□□□□□ -0.91
CPNE1-225ENST00000483495 A6NDN8 102 aa9.39□□□□□ -0.91
CPNE1-225ENST00000483495 FHL2Q14192 279 aa9.39□□□□□ -0.91
CPNE1-225ENST00000483495 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-225ENST00000483495 IGKV2-29A2NJV5 120 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-225ENST00000483495 HERVK_113P61574 105 aa9.38□□□□□ -0.91
CPNE1-225ENST00000483495 TRGV4A0A0C4DH28 118 aa9.38□□□□□ -0.91
CPNE1-225ENST00000483495 MYMXA0A1B0GTQ4 84 aa9.38□□□□□ -0.91
CPNE1-225ENST00000483495 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
CPNE1-225ENST00000483495 MRPS36P82909 103 aaKnown RBP9.38□□□□□ -0.91
CPNE1-225ENST00000483495 GAGE4Q13068 117 aa9.38□□□□□ -0.91
CPNE1-225ENST00000483495 GAGE5Q13069 117 aa9.38□□□□□ -0.91
CPNE1-225ENST00000483495 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
CPNE1-225ENST00000483495 CEMP1Q6PRD7 247 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-225ENST00000483495 CHAC1Q9BUX1 264 aa9.38□□□□□ -0.91
CPNE1-225ENST00000483495 GTSF1LQ9H1H1 148 aa9.38□□□□□ -0.91
CPNE1-225ENST00000483495 TAX1BP3O14907 124 aa9.37□□□□□ -0.91
CPNE1-225ENST00000483495 NTM-AS1Q6ZSK4 140 aa9.37□□□□□ -0.91
CPNE1-225ENST00000483495 TRRAPQ9Y4A5 3859 aa9.37□□□□□ -0.91
CPNE1-225ENST00000483495 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
CPNE1-225ENST00000483495 TMEM170BQ5T4T1 132 aa9.36□□□□□ -0.91
CPNE1-225ENST00000483495 SBSPONQ8IVN8 264 aa9.36□□□□□ -0.91
CPNE1-225ENST00000483495 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
CPNE1-225ENST00000483495 CYSRT1A8MQ03 144 aa9.36□□□□□ -0.91
CPNE1-225ENST00000483495 LYRM9A8MSI8 78 aa9.36□□□□□ -0.91
CPNE1-225ENST00000483495 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
CPNE1-225ENST00000483495 DEFB135Q30KP9 77 aa9.36□□□□□ -0.91
CPNE1-225ENST00000483495 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
CPNE1-225ENST00000483495 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
CPNE1-225ENST00000483495 UBE2V1Q13404 147 aa9.35□□□□□ -0.91
CPNE1-225ENST00000483495 SHISA2Q6UWI4 295 aa9.35□□□□□ -0.91
CPNE1-225ENST00000483495 Q6ZUT4 128 aa9.35□□□□□ -0.91
CPNE1-225ENST00000483495 LOC100131303A0A0U1RQF7 123 aa9.34□□□□□ -0.91
CPNE1-225ENST00000483495 IGHV4-30-4P0DP06 118 aa9.34□□□□□ -0.91
CPNE1-225ENST00000483495 DEFB130BP0DP73 79 aa9.34□□□□□ -0.91
CPNE1-225ENST00000483495 DEFB130AP0DP74 79 aa9.34□□□□□ -0.91
CPNE1-225ENST00000483495 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
CPNE1-225ENST00000483495 TAL2Q16559 108 aa9.34□□□□□ -0.91
CPNE1-225ENST00000483495 TINCRA0A1B0GVN0 87 aa9.34□□□□□ -0.91
CPNE1-225ENST00000483495 PRIMA1Q86XR5 153 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms