RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-204ENST00000483474 HLA-DQA1P01909 254 aa11.48□□□□□ -0.57
RTCA-204ENST00000483474 KRTAP4-5Q9BYR2 181 aa11.48□□□□□ -0.57
RTCA-204ENST00000483474 LRP1BQ9NZR2 4599 aa11.47□□□□□ -0.57
RTCA-204ENST00000483474 REG3AQ06141 175 aa11.47□□□□□ -0.57
RTCA-204ENST00000483474 CLPSL2Q6UWE3 100 aa11.47□□□□□ -0.57
RTCA-204ENST00000483474 PRR34Q9NV39 138 aa11.47□□□□□ -0.57
RTCA-204ENST00000483474 TRAV8-4A0A0B4J246 113 aa11.46□□□□□ -0.57
RTCA-204ENST00000483474 FAM229AH3BQW9 127 aa11.46□□□□□ -0.57
RTCA-204ENST00000483474 NCR2O95944 276 aa11.46□□□□□ -0.57
RTCA-204ENST00000483474 RIGQ13278 110 aa11.46□□□□□ -0.57
RTCA-204ENST00000483474 ADIRFQ15847 76 aa11.46□□□□□ -0.57
RTCA-204ENST00000483474 NAT8Q9UHE5 227 aa11.46□□□□□ -0.57
RTCA-204ENST00000483474 PMCHP20382 165 aa11.45□□□□□ -0.58
RTCA-204ENST00000483474 AMMECR1LQ6DCA0 310 aa11.45□□□□□ -0.58
RTCA-204ENST00000483474 ISOC2Q96AB3 205 aa11.45□□□□□ -0.58
RTCA-204ENST00000483474 TMEM191AQ9H0A3 160 aa11.45□□□□□ -0.58
RTCA-204ENST00000483474 RYR1P21817 5038 aa11.45□□□□□ -0.58
RTCA-204ENST00000483474 SDHAF1A6NFY7 115 aa11.44□□□□□ -0.58
RTCA-204ENST00000483474 APCSP02743 223 aa11.44□□□□□ -0.58
RTCA-204ENST00000483474 DEFB104AQ8WTQ1 72 aa11.44□□□□□ -0.58
RTCA-204ENST00000483474 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
RTCA-204ENST00000483474 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
RTCA-204ENST00000483474 NAT8BQ9UHF3 227 aa11.44□□□□□ -0.58
RTCA-204ENST00000483474 I3L3M4 83 aa11.43□□□□□ -0.58
RTCA-204ENST00000483474 RPL23P62829 140 aaKnown RBP11.43□□□□□ -0.58
RTCA-204ENST00000483474 V9GYV3 84 aa11.43□□□□□ -0.58
RTCA-204ENST00000483474 HSPG2P98160 4391 aa11.43□□□□□ -0.58
RTCA-204ENST00000483474 USP17L23D6RBM5 183 aa11.42□□□□□ -0.58
RTCA-204ENST00000483474 H7C423 109 aa11.42□□□□□ -0.58
RTCA-204ENST00000483474 PPP1R17O96001 155 aa11.42□□□□□ -0.58
RTCA-204ENST00000483474 SMR3BP02814 79 aaPredicted RBP11.42□□□□□ -0.58
RTCA-204ENST00000483474 RAB14P61106 215 aa11.42□□□□□ -0.58
RTCA-204ENST00000483474 C20orf203Q8NBC4 194 aa11.42□□□□□ -0.58
RTCA-204ENST00000483474 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
RTCA-204ENST00000483474 IGLV4-60A0A075B6I1 120 aa11.41□□□□□ -0.58
RTCA-204ENST00000483474 IGLV10-54A0A075B6I4 117 aa11.41□□□□□ -0.58
RTCA-204ENST00000483474 Q5VSD8 79 aa11.41□□□□□ -0.58
RTCA-204ENST00000483474 RNASEKQ6P5S7 137 aaKnown RBP11.41□□□□□ -0.58
RTCA-204ENST00000483474 CLRN3Q8NCR9 226 aa11.41□□□□□ -0.58
RTCA-204ENST00000483474 NUP35Q8NFH5 326 aa11.41□□□□□ -0.58
RTCA-204ENST00000483474 BTF3L4Q96K17 158 aa11.41□□□□□ -0.58
RTCA-204ENST00000483474 PCLOQ9Y6V0 5065 aa11.4□□□□□ -0.58
RTCA-204ENST00000483474 TRBV6-5A0A0K0K1A5 114 aa11.4□□□□□ -0.58
RTCA-204ENST00000483474 RAB4AP20338 218 aa11.39□□□□□ -0.59
RTCA-204ENST00000483474 DGAT2L7PQ6IED9 249 aa11.39□□□□□ -0.59
RTCA-204ENST00000483474 TMEM101Q96IK0 257 aa11.39□□□□□ -0.59
RTCA-204ENST00000483474 FAM30AQ9NZY2 134 aa11.39□□□□□ -0.59
RTCA-204ENST00000483474 A0A1B0GW15 77 aa11.38□□□□□ -0.59
RTCA-204ENST00000483474 C9JQL5 133 aa11.38□□□□□ -0.59
RTCA-204ENST00000483474 ZNF25P17030 456 aaPredicted RBP11.38□□□□□ -0.59
RTCA-204ENST00000483474 HAMPP81172 84 aa11.38□□□□□ -0.59
RTCA-204ENST00000483474 AMN1Q8IY45 258 aa11.38□□□□□ -0.59
RTCA-204ENST00000483474 DNAH5Q8TE73 4624 aa11.38□□□□□ -0.59
RTCA-204ENST00000483474 IGKV3OR2-268A0A0C4DH90 116 aa11.37□□□□□ -0.59
RTCA-204ENST00000483474 S100A8P05109 93 aa11.37□□□□□ -0.59
RTCA-204ENST00000483474 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
RTCA-204ENST00000483474 SRSF3P84103 164 aaKnown RBP11.37□□□□□ -0.59
RTCA-204ENST00000483474 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
RTCA-204ENST00000483474 AP5S1Q9NUS5 200 aa11.37□□□□□ -0.59
RTCA-204ENST00000483474 APOBP04114 4563 aaKnown RBP11.36□□□□□ -0.59
RTCA-204ENST00000483474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.36□□□□□ -0.59
RTCA-204ENST00000483474 SMIM27A0A1W2PRY6 76 aa11.36□□□□□ -0.59
RTCA-204ENST00000483474 IGKV2-29A2NJV5 120 aaPredicted RBP11.36□□□□□ -0.59
RTCA-204ENST00000483474 PRSS1P07477 247 aa11.36□□□□□ -0.59
RTCA-204ENST00000483474 FCER1GP30273 86 aa11.36□□□□□ -0.59
RTCA-204ENST00000483474 SMAGPQ0VAQ4 97 aa11.36□□□□□ -0.59
RTCA-204ENST00000483474 CFAP161Q6P656 301 aa11.36□□□□□ -0.59
RTCA-204ENST00000483474 Q6ZSA8 131 aa11.36□□□□□ -0.59
RTCA-204ENST00000483474 hDV102S1A0JD36 115 aa11.35□□□□□ -0.59
RTCA-204ENST00000483474 VCYO14598 125 aa11.35□□□□□ -0.59
RTCA-204ENST00000483474 PPP1R2P9O14990 202 aa11.35□□□□□ -0.59
RTCA-204ENST00000483474 FGF6P10767 208 aa11.35□□□□□ -0.59
RTCA-204ENST00000483474 CAMPP49913 170 aa11.35□□□□□ -0.59
RTCA-204ENST00000483474 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
RTCA-204ENST00000483474 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.34□□□□□ -0.59
RTCA-204ENST00000483474 F8W036 122 aa11.34□□□□□ -0.59
RTCA-204ENST00000483474 PLA2G1BP04054 148 aaKnown RBP11.34□□□□□ -0.59
RTCA-204ENST00000483474 KRTAP26-1Q6PEX3 210 aa11.34□□□□□ -0.59
RTCA-204ENST00000483474 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
RTCA-204ENST00000483474 TMEM242Q9NWH2 141 aa11.34□□□□□ -0.59
RTCA-204ENST00000483474 TRBV27A0A0K0K1C4 114 aa11.33□□□□□ -0.6
RTCA-204ENST00000483474 LINC00862A6NCI5 91 aa11.33□□□□□ -0.6
RTCA-204ENST00000483474 POLR2KP53803 58 aaKnown RBP11.33□□□□□ -0.6
RTCA-204ENST00000483474 OR5A1Q8NGJ0 315 aa11.33□□□□□ -0.6
RTCA-204ENST00000483474 C7orf77A4D0Y5 90 aa11.32□□□□□ -0.6
RTCA-204ENST00000483474 GAGE12HA6NDE8 117 aa11.32□□□□□ -0.6
RTCA-204ENST00000483474 TSHBP01222 138 aa11.32□□□□□ -0.6
RTCA-204ENST00000483474 RPS10P46783 165 aaKnown RBP11.32□□□□□ -0.6
RTCA-204ENST00000483474 SUMO2P61956 95 aaKnown RBP11.32□□□□□ -0.6
RTCA-204ENST00000483474 FAM104BQ5XKR9 115 aa11.32□□□□□ -0.6
RTCA-204ENST00000483474 CHAC1Q9BUX1 264 aa11.32□□□□□ -0.6
RTCA-204ENST00000483474 SMKR1H3BMG3 65 aa11.31□□□□□ -0.6
RTCA-204ENST00000483474 GAS8-AS1O95177 125 aa11.31□□□□□ -0.6
RTCA-204ENST00000483474 CKS2P33552 79 aa11.31□□□□□ -0.6
RTCA-204ENST00000483474 HBBP68871 147 aa11.31□□□□□ -0.6
RTCA-204ENST00000483474 C9orf163Q8N9P6 203 aa11.31□□□□□ -0.6
RTCA-204ENST00000483474 TMEM18Q96B42 140 aa11.31□□□□□ -0.6
RTCA-204ENST00000483474 TCAPO15273 167 aa11.3□□□□□ -0.6
RTCA-204ENST00000483474 ESDP10768 282 aa11.3□□□□□ -0.6
RTCA-204ENST00000483474 PNRC1Q12796 327 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms