RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 TRBV6-8A0A0A6YYG3 113 aa6.48□□□□□ -1.37
HMG20B-210ENST00000483417 SIVA1O15304 175 aa6.48□□□□□ -1.37
HMG20B-210ENST00000483417 IGHV3-30P01768 117 aa6.48□□□□□ -1.37
HMG20B-210ENST00000483417 IGHV3-33P01772 117 aa6.48□□□□□ -1.37
HMG20B-210ENST00000483417 S100A8P05109 93 aa6.48□□□□□ -1.37
HMG20B-210ENST00000483417 IGHV3-30-3P0DP02 117 aa6.48□□□□□ -1.37
HMG20B-210ENST00000483417 IGHV3-30-5P0DP03 117 aa6.48□□□□□ -1.37
HMG20B-210ENST00000483417 Q6ZRN7 208 aaPredicted RBP6.48□□□□□ -1.37
HMG20B-210ENST00000483417 DAZ4Q86SG3 579 aaKnown RBP6.48□□□□□ -1.37
HMG20B-210ENST00000483417 GNB1LQ9BYB4 327 aa6.48□□□□□ -1.37
HMG20B-210ENST00000483417 ST20Q9HBF5 79 aa6.48□□□□□ -1.37
HMG20B-210ENST00000483417 DAZ3Q9NR90 486 aaKnown RBP6.48□□□□□ -1.37
HMG20B-210ENST00000483417 LOC389332A0A1B0GUA5 103 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 COLCA2A8K830 154 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 TSHBP01222 138 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 APCSP02743 223 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 PMCHP20382 165 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 GAGE6Q13070 117 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 FRZBQ92765 325 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 PRELID3AQ96N28 172 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 CHCHD7Q9BUK0 85 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 SMCO4Q9NRQ5 59 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 ABCA13Q86UQ4 5058 aa6.47□□□□□ -1.37
HMG20B-210ENST00000483417 TRAV8-6A0A0B4J262 113 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 TRBV27A0A0K0K1C4 114 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 C16orf90A8MZG2 172 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 TMEM262E9PQX1 116 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 I3L3M4 83 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 VCYO14598 125 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 DNAH10OSP0CZ25 163 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 SUMO2P61956 95 aaKnown RBP6.46□□□□□ -1.38
HMG20B-210ENST00000483417 FABP9Q0Z7S8 132 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 NIT1Q86X76 327 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 ORMDL3Q8N138 153 aa6.46□□□□□ -1.38
HMG20B-210ENST00000483417 MRPL18Q9H0U6 180 aaKnown RBP6.46□□□□□ -1.38
HMG20B-210ENST00000483417 TCAPO15273 167 aa6.45□□□□□ -1.38
HMG20B-210ENST00000483417 ATP6V1G1O75348 118 aa6.45□□□□□ -1.38
HMG20B-210ENST00000483417 CDK2AP2O75956 126 aa6.45□□□□□ -1.38
HMG20B-210ENST00000483417 KRTAP10-2P60368 255 aa6.45□□□□□ -1.38
HMG20B-210ENST00000483417 IQCJQ1A5X6 159 aa6.45□□□□□ -1.38
HMG20B-210ENST00000483417 SPATA12Q7Z6I5 190 aa6.45□□□□□ -1.38
HMG20B-210ENST00000483417 Q8N976 141 aa6.45□□□□□ -1.38
HMG20B-210ENST00000483417 ALKBH7Q9BT30 221 aaPredicted RBP6.45□□□□□ -1.38
HMG20B-210ENST00000483417 TRAPPC1Q9Y5R8 145 aa6.45□□□□□ -1.38
HMG20B-210ENST00000483417 IGLV4-60A0A075B6I1 120 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.44□□□□□ -1.38
HMG20B-210ENST00000483417 IGHV1-24A0A0C4DH33 117 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 IGKV2-29A2NJV5 120 aaPredicted RBP6.44□□□□□ -1.38
HMG20B-210ENST00000483417 PRSS47A8MTI9 375 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 PPBPP02775 128 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 ESDP10768 282 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 COTL1Q14019 142 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 MPV17L2Q567V2 206 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 LINC01556Q5JQF7 62 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 C20orf78Q9BR46 151 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 CHCHD5Q9BSY4 110 aa6.44□□□□□ -1.38
HMG20B-210ENST00000483417 TRBV25-1A0A075B6N4 114 aa6.43□□□□□ -1.38
HMG20B-210ENST00000483417 HLA-DQA1P01909 254 aa6.43□□□□□ -1.38
HMG20B-210ENST00000483417 IFI27P40305 119 aaPredicted RBP6.43□□□□□ -1.38
HMG20B-210ENST00000483417 AMTP48728 403 aa6.43□□□□□ -1.38
HMG20B-210ENST00000483417 RBX1P62877 108 aa6.43□□□□□ -1.38
HMG20B-210ENST00000483417 TMEM243Q9BU79 118 aa6.43□□□□□ -1.38
HMG20B-210ENST00000483417 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
HMG20B-210ENST00000483417 IBA57-AS1B1ANH7 110 aa6.42□□□□□ -1.38
HMG20B-210ENST00000483417 PHOX2AO14813 284 aa6.42□□□□□ -1.38
HMG20B-210ENST00000483417 PPP1R17O96001 155 aa6.42□□□□□ -1.38
HMG20B-210ENST00000483417 RPL32P62910 135 aaKnown RBP6.42□□□□□ -1.38
HMG20B-210ENST00000483417 ENHOQ6UWT2 76 aa6.42□□□□□ -1.38
HMG20B-210ENST00000483417 C20orf203Q8NBC4 194 aa6.42□□□□□ -1.38
HMG20B-210ENST00000483417 FAM104AQ969W3 186 aa6.42□□□□□ -1.38
HMG20B-210ENST00000483417 URB1-AS1Q96HZ7 61 aa6.42□□□□□ -1.38
HMG20B-210ENST00000483417 SMIM2Q9BVW6 85 aa6.42□□□□□ -1.38
HMG20B-210ENST00000483417 K7EP13 123 aa6.41□□□□□ -1.38
HMG20B-210ENST00000483417 TRGC2P03986 189 aa6.41□□□□□ -1.38
HMG20B-210ENST00000483417 RPL39P62891 51 aaKnown RBP6.41□□□□□ -1.38
HMG20B-210ENST00000483417 COX19Q49B96 90 aa6.41□□□□□ -1.38
HMG20B-210ENST00000483417 TMEM97Q5BJF2 176 aa6.41□□□□□ -1.38
HMG20B-210ENST00000483417 Q8N8P6 123 aa6.41□□□□□ -1.38
HMG20B-210ENST00000483417 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.41□□□□□ -1.38
HMG20B-210ENST00000483417 OPRPNQ99935 248 aaPredicted RBP6.41□□□□□ -1.38
HMG20B-210ENST00000483417 TRAV9-2A0A087WT02 112 aa6.4□□□□□ -1.38
HMG20B-210ENST00000483417 A0A087WX48 190 aa6.4□□□□□ -1.38
HMG20B-210ENST00000483417 FGF6P10767 208 aa6.4□□□□□ -1.38
HMG20B-210ENST00000483417 RAB5AP20339 215 aa6.4□□□□□ -1.38
HMG20B-210ENST00000483417 S100A1P23297 94 aa6.4□□□□□ -1.38
HMG20B-210ENST00000483417 LINC00269Q8N2A0 174 aa6.4□□□□□ -1.38
HMG20B-210ENST00000483417 MAPKAPK5-AS1Q8N8E1 139 aa6.4□□□□□ -1.38
HMG20B-210ENST00000483417 MAP1LC3AQ9H492 121 aa6.4□□□□□ -1.38
HMG20B-210ENST00000483417 PGPEP1Q9NXJ5 209 aa6.4□□□□□ -1.38
HMG20B-210ENST00000483417 DNAH8Q96JB1 4490 aa6.4□□□□□ -1.39
HMG20B-210ENST00000483417 A0A087WTM6 91 aa6.39□□□□□ -1.39
HMG20B-210ENST00000483417 A0A1B0GUV1 79 aa6.39□□□□□ -1.39
HMG20B-210ENST00000483417 MT-ND6P03923 174 aa6.39□□□□□ -1.39
HMG20B-210ENST00000483417 ANGP03950 147 aaKnown RBP6.39□□□□□ -1.39
HMG20B-210ENST00000483417 FCER1GP30273 86 aa6.39□□□□□ -1.39
HMG20B-210ENST00000483417 RNASEKQ6P5S7 137 aaKnown RBP6.39□□□□□ -1.39
HMG20B-210ENST00000483417 CLPSL2Q6UWE3 100 aa6.39□□□□□ -1.39
HMG20B-210ENST00000483417 NFE4Q86UQ8 179 aa6.39□□□□□ -1.39
HMG20B-210ENST00000483417 C18orf32Q8TCD1 76 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms