RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 TMEM91Q6ZNR0 172 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 ZNF833PQ6ZTB9 187 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 KRTAP11-1Q8IUC1 163 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 EIF4E3Q8N5X7 224 aaKnown RBP2.06□□□□□ -2.08
SHQ1-208ENST00000482785 OR10P1Q8NGE3 313 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 OR4K15Q8NH41 348 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 TOMM6Q96B49 74 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 LPAR5Q9H1C0 372 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 SH3BGRL3Q9H299 93 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 BANF2Q9H503 90 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 TAF9BQ9HBM6 251 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 ABRACLQ9P1F3 81 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 TRAV9-1A0A075B6T8 112 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 SMIM31A0A1B0GVY4 71 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 C19orf71A6NCJ1 209 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 IFITM5A6NNB3 132 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 ZNF736B4DX44 427 aaPredicted RBP2.05□□□□□ -2.08
SHQ1-208ENST00000482785 GPR31O00270 319 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 NDUFA3O95167 84 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 NPYP01303 97 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 HIST1H2BOP23527 126 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 HIST1H2BBP33778 126 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 EMP1P54849 157 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 TMBIM6P55061 237 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 FXYD7P58549 80 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 HIST1H2BDP58876 126 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 HIST1H2BCP62807 126 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 RPS25P62851 125 aaKnown RBP2.05□□□□□ -2.08
SHQ1-208ENST00000482785 CCL20P78556 96 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 AKR1C1Q04828 323 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 HIST2H2BEQ16778 126 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 ESRGQ1W209 222 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.05□□□□□ -2.08
SHQ1-208ENST00000482785 C6orf201Q7Z4U5 140 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 HIST1H2BHQ93079 126 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 HIST1H2BNQ99877 126 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 HIST1H2BMQ99879 126 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 C6orf62Q9GZU0 229 aaPredicted RBP2.05□□□□□ -2.08
SHQ1-208ENST00000482785 BATF3Q9NR55 127 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 TXNL4BQ9NX01 149 aaKnown RBP2.05□□□□□ -2.08
SHQ1-208ENST00000482785 FUT9Q9Y231 359 aa2.05□□□□□ -2.08
SHQ1-208ENST00000482785 TRBV19A0A075B6N1 114 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 TRBV6-7A0A0A0MS04 114 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 LOC105371267A0A1B0GV96 52 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 H3BUA1 57 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 PSCAO43653 123 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 NDUFC2O95298 119 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 PRM2P04554 102 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 SAA2P0DJI9 122 aaPredicted RBP2.04□□□□□ -2.08
SHQ1-208ENST00000482785 SPRR2DP22532 72 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 CBLN1P23435 193 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 SDC2P34741 201 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 ARPC4P59998 168 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 RHOBP62745 196 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 GNG5P63218 68 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 DEFA5Q01523 94 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 MOBPQ13875 183 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 WFDC2Q14508 124 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 AMMECR1LQ6DCA0 310 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 Q6Q795 121 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 CLVS1Q8IUQ0 354 aaPredicted RBP2.04□□□□□ -2.08
SHQ1-208ENST00000482785 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.04□□□□□ -2.08
SHQ1-208ENST00000482785 SMCR5Q8TEV8 140 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 ARHGAP5-AS1Q96IT6 56 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 C2orf50Q96LR7 162 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 IL36BQ9NZH7 164 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 SS18L2Q9UHA2 77 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 CYSLTR1Q9Y271 337 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 NUBP2Q9Y5Y2 271 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
SHQ1-208ENST00000482785 TRAV4A0A0B4J268 109 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 A0A0D9SG52 128 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 TMEM235A6NFC5 223 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 CCDC160A6NGH7 325 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 J3QRK9 145 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 SYNGR2O43760 224 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 CDS2O95674 445 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 IGKV1-16P04430 117 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 NBEAP1P0C6P0 100 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 GZMBP10144 247 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 HIST1H1DP16402 221 aaKnown RBP2.03□□□□□ -2.08
SHQ1-208ENST00000482785 G6PCP35575 357 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 XCL1P47992 114 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 NCS1P62166 190 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 LSM3P62310 102 aaKnown RBP2.03□□□□□ -2.08
SHQ1-208ENST00000482785 HIST1H4AP62805 103 aaKnown RBP2.03□□□□□ -2.08
SHQ1-208ENST00000482785 KLK9Q2XQG4 91 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 KRTAP25-1Q3LHN0 102 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 ASB16-AS1Q495Z4 193 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 FAM229BQ4G0N7 80 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 RPL39P5Q59GN2 51 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 SH2D6Q7Z4S9 175 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 RNF182Q8N6D2 247 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 C1orf64Q8NEQ6 169 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 OR10J5Q8NHC4 309 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 S100A16Q96FQ6 103 aaKnown RBP2.03□□□□□ -2.08
SHQ1-208ENST00000482785 IGF2BP2-AS1Q96M15 143 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 MIEN1Q9BRT3 115 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 PBDC1Q9BVG4 233 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 METTL1Q9UBP6 276 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms