RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 LYZL1Q6UWQ5 148 aa12.08□□□□□ -0.48
TMEM139-208ENST00000482420 NIT2Q9NQR4 276 aa12.08□□□□□ -0.48
TMEM139-208ENST00000482420 HMSDA8MTL9 139 aa12.07□□□□□ -0.48
TMEM139-208ENST00000482420 TRGC1P0CF51 173 aa12.07□□□□□ -0.48
TMEM139-208ENST00000482420 PGLYRP4Q96LB8 373 aa12.07□□□□□ -0.48
TMEM139-208ENST00000482420 DPH3P1Q9H4G8 78 aa12.07□□□□□ -0.48
TMEM139-208ENST00000482420 XKRY2A2RUG3 117 aa12.06□□□□□ -0.48
TMEM139-208ENST00000482420 GAGE12HA6NDE8 117 aa12.06□□□□□ -0.48
TMEM139-208ENST00000482420 IFNA1P01562 189 aa12.06□□□□□ -0.48
TMEM139-208ENST00000482420 NTF3P20783 257 aa12.06□□□□□ -0.48
TMEM139-208ENST00000482420 EIF5AP63241 154 aaKnown RBP12.06□□□□□ -0.48
TMEM139-208ENST00000482420 COTL1Q14019 142 aa12.06□□□□□ -0.48
TMEM139-208ENST00000482420 F2Z2F3 143 aa12.05□□□□□ -0.48
TMEM139-208ENST00000482420 PHOX2AO14813 284 aa12.05□□□□□ -0.48
TMEM139-208ENST00000482420 HIGD2BQ4VC39 106 aa12.05□□□□□ -0.48
TMEM139-208ENST00000482420 C15orf56Q8N910 161 aa12.05□□□□□ -0.48
TMEM139-208ENST00000482420 RNF185Q96GF1 192 aa12.05□□□□□ -0.48
TMEM139-208ENST00000482420 COX6A2Q02221 97 aa12.04□□□□□ -0.48
TMEM139-208ENST00000482420 TRBV20OR9-2A0A075B6H5 130 aa12.03□□□□□ -0.48
TMEM139-208ENST00000482420 TRAV26-2A0A0B4J265 109 aa12.03□□□□□ -0.48
TMEM139-208ENST00000482420 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
TMEM139-208ENST00000482420 TRAV1-1A0A0B4J248 108 aa12.02□□□□□ -0.49
TMEM139-208ENST00000482420 MEF2BQ02080 365 aaPredicted RBP12.02□□□□□ -0.49
TMEM139-208ENST00000482420 TWIST1Q15672 202 aa12.02□□□□□ -0.49
TMEM139-208ENST00000482420 MAJINQ3KP22 176 aa12.02□□□□□ -0.49
TMEM139-208ENST00000482420 C7orf33Q8WU49 177 aa12.02□□□□□ -0.49
TMEM139-208ENST00000482420 SMIM12Q96EX1 92 aa12.02□□□□□ -0.49
TMEM139-208ENST00000482420 MED9Q9NWA0 146 aa12.02□□□□□ -0.49
TMEM139-208ENST00000482420 PLAC8Q9NZF1 115 aa12.02□□□□□ -0.49
TMEM139-208ENST00000482420 CTRLP40313 264 aa12.01□□□□□ -0.49
TMEM139-208ENST00000482420 CFAP161Q6P656 301 aa12.01□□□□□ -0.49
TMEM139-208ENST00000482420 C9orf62Q8N4C0 152 aa12.01□□□□□ -0.49
TMEM139-208ENST00000482420 GTSF1Q8WW33 167 aa12.01□□□□□ -0.49
TMEM139-208ENST00000482420 TEX46H3BTG2 121 aa12□□□□□ -0.49
TMEM139-208ENST00000482420 PDE6DO43924 150 aa12□□□□□ -0.49
TMEM139-208ENST00000482420 RPS10P46783 165 aaKnown RBP12□□□□□ -0.49
TMEM139-208ENST00000482420 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
TMEM139-208ENST00000482420 Q6ZNX1 250 aa12□□□□□ -0.49
TMEM139-208ENST00000482420 GATD1Q8NB37 220 aa12□□□□□ -0.49
TMEM139-208ENST00000482420 PRSS3P2Q8NHM4 247 aa12□□□□□ -0.49
TMEM139-208ENST00000482420 CHCHD10Q8WYQ3 142 aaPredicted RBP12□□□□□ -0.49
TMEM139-208ENST00000482420 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
TMEM139-208ENST00000482420 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
TMEM139-208ENST00000482420 NDUFS6O75380 124 aaKnown RBP11.99□□□□□ -0.49
TMEM139-208ENST00000482420 RNASEKQ6P5S7 137 aaKnown RBP11.99□□□□□ -0.49
TMEM139-208ENST00000482420 NUDT10Q8NFP7 164 aa11.99□□□□□ -0.49
TMEM139-208ENST00000482420 LYPD6BQ8NI32 183 aa11.99□□□□□ -0.49
TMEM139-208ENST00000482420 RPL39LQ96EH5 51 aaKnown RBP11.99□□□□□ -0.49
TMEM139-208ENST00000482420 NUDT11Q96G61 164 aa11.99□□□□□ -0.49
TMEM139-208ENST00000482420 BIN3Q9NQY0 253 aa11.99□□□□□ -0.49
TMEM139-208ENST00000482420 RNASE7Q9H1E1 156 aaKnown RBP11.98□□□□□ -0.49
TMEM139-208ENST00000482420 BCL2P10415 239 aa11.97□□□□□ -0.49
TMEM139-208ENST00000482420 STPG4Q8N801 248 aa11.97□□□□□ -0.49
TMEM139-208ENST00000482420 RPP21Q9H633 154 aaKnown RBP11.97□□□□□ -0.49
TMEM139-208ENST00000482420 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.49
TMEM139-208ENST00000482420 PRR3P79522 188 aaKnown RBP11.96□□□□□ -0.49
TMEM139-208ENST00000482420 ODF1Q14990 250 aa11.96□□□□□ -0.49
TMEM139-208ENST00000482420 EIF5AL1Q6IS14 154 aaKnown RBP11.96□□□□□ -0.49
TMEM139-208ENST00000482420 CNFNQ9BYD5 112 aa11.96□□□□□ -0.49
TMEM139-208ENST00000482420 A0A096LNI7 61 aa11.95□□□□□ -0.5
TMEM139-208ENST00000482420 APCSP02743 223 aa11.95□□□□□ -0.5
TMEM139-208ENST00000482420 FGF6P10767 208 aa11.95□□□□□ -0.5
TMEM139-208ENST00000482420 GVQW2A0A096LPI5 108 aaPredicted RBP11.94□□□□□ -0.5
TMEM139-208ENST00000482420 K7EN84 100 aa11.93□□□□□ -0.5
TMEM139-208ENST00000482420 XCL1P47992 114 aa11.93□□□□□ -0.5
TMEM139-208ENST00000482420 FOXI1Q12951 378 aa11.93□□□□□ -0.5
TMEM139-208ENST00000482420 LINC00526Q96FQ7 95 aa11.93□□□□□ -0.5
TMEM139-208ENST00000482420 SDHAF1A6NFY7 115 aa11.92□□□□□ -0.5
TMEM139-208ENST00000482420 NCR2O95944 276 aa11.92□□□□□ -0.5
TMEM139-208ENST00000482420 SMIM15Q7Z3B0 74 aa11.92□□□□□ -0.5
TMEM139-208ENST00000482420 H7C423 109 aa11.91□□□□□ -0.5
TMEM139-208ENST00000482420 OCC1Q8TAD7 63 aa11.91□□□□□ -0.5
TMEM139-208ENST00000482420 LINC01600Q96MT4 127 aa11.91□□□□□ -0.5
TMEM139-208ENST00000482420 TNXBP22105 4242 aa11.89□□□□□ -0.51
TMEM139-208ENST00000482420 CCL25O15444 150 aa11.89□□□□□ -0.51
TMEM139-208ENST00000482420 PMCHP20382 165 aa11.89□□□□□ -0.51
TMEM139-208ENST00000482420 OR5A1Q8NGJ0 315 aa11.89□□□□□ -0.51
TMEM139-208ENST00000482420 BTF3L4Q96K17 158 aa11.89□□□□□ -0.51
TMEM139-208ENST00000482420 I3L3M4 83 aa11.88□□□□□ -0.51
TMEM139-208ENST00000482420 ZNF25P17030 456 aaPredicted RBP11.88□□□□□ -0.51
TMEM139-208ENST00000482420 TEX261Q6UWH6 196 aa11.88□□□□□ -0.51
TMEM139-208ENST00000482420 TMEM101Q96IK0 257 aa11.88□□□□□ -0.51
TMEM139-208ENST00000482420 CARD19Q96LW7 228 aa11.88□□□□□ -0.51
TMEM139-208ENST00000482420 LRP2P98164 4655 aa11.88□□□□□ -0.51
TMEM139-208ENST00000482420 LINC00959A0A1B0GUT2 108 aa11.87□□□□□ -0.51
TMEM139-208ENST00000482420 FAM231BA6NCW3 169 aa11.87□□□□□ -0.51
TMEM139-208ENST00000482420 GAS8-AS1O95177 125 aa11.87□□□□□ -0.51
TMEM139-208ENST00000482420 IGHV1-58A0A0C4DH39 117 aa11.86□□□□□ -0.51
TMEM139-208ENST00000482420 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
TMEM139-208ENST00000482420 LINC00474Q9P2X8 69 aa11.86□□□□□ -0.51
TMEM139-208ENST00000482420 GATCO43716 136 aaKnown RBP11.85□□□□□ -0.51
TMEM139-208ENST00000482420 TSHBP01222 138 aa11.85□□□□□ -0.51
TMEM139-208ENST00000482420 TAGLN2P37802 199 aaKnown RBP11.85□□□□□ -0.51
TMEM139-208ENST00000482420 A0A0J9YXV3 536 aa11.84□□□□□ -0.51
TMEM139-208ENST00000482420 SPINK6Q6UWN8 80 aa11.84□□□□□ -0.51
TMEM139-208ENST00000482420 MRAP2Q96G30 205 aa11.84□□□□□ -0.51
TMEM139-208ENST00000482420 ZNF561-AS1K7EIQ3 104 aa11.83□□□□□ -0.52
TMEM139-208ENST00000482420 ESDP10768 282 aa11.83□□□□□ -0.52
TMEM139-208ENST00000482420 CEBPGP53567 150 aa11.83□□□□□ -0.52
TMEM139-208ENST00000482420 SS18Q15532 418 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms