RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-203ENST00000482173 PDE6DO43924 150 aa12.34□□□□□ -0.43
CHPF2-203ENST00000482173 SLPIP03973 132 aa12.34□□□□□ -0.43
CHPF2-203ENST00000482173 AMTP48728 403 aa12.34□□□□□ -0.43
CHPF2-203ENST00000482173 MEF2BQ02080 365 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-203ENST00000482173 CIRBPQ14011 172 aaKnown RBP12.34□□□□□ -0.43
CHPF2-203ENST00000482173 MED9Q9NWA0 146 aa12.34□□□□□ -0.43
CHPF2-203ENST00000482173 TRBV20OR9-2A0A075B6H5 130 aa12.33□□□□□ -0.44
CHPF2-203ENST00000482173 COTL1Q14019 142 aa12.33□□□□□ -0.44
CHPF2-203ENST00000482173 EIF5AL1Q6IS14 154 aaKnown RBP12.33□□□□□ -0.44
CHPF2-203ENST00000482173 C9orf62Q8N4C0 152 aa12.33□□□□□ -0.44
CHPF2-203ENST00000482173 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
CHPF2-203ENST00000482173 SULT1A2P50226 295 aa12.32□□□□□ -0.44
CHPF2-203ENST00000482173 WDR73Q6P4I2 378 aa12.32□□□□□ -0.44
CHPF2-203ENST00000482173 A0A087WYN8 130 aa12.31□□□□□ -0.44
CHPF2-203ENST00000482173 CHTF8P0CG12 524 aa12.31□□□□□ -0.44
CHPF2-203ENST00000482173 NUDT10Q8NFP7 164 aa12.31□□□□□ -0.44
CHPF2-203ENST00000482173 NUDT11Q96G61 164 aa12.31□□□□□ -0.44
CHPF2-203ENST00000482173 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
CHPF2-203ENST00000482173 HMCN2Q8NDA2 5059 aa12.3□□□□□ -0.44
CHPF2-203ENST00000482173 CTRLP40313 264 aa12.3□□□□□ -0.44
CHPF2-203ENST00000482173 TWIST1Q15672 202 aa12.3□□□□□ -0.44
CHPF2-203ENST00000482173 IGKV3OR2-268A0A0C4DH90 116 aa12.29□□□□□ -0.44
CHPF2-203ENST00000482173 GAGE12HA6NDE8 117 aa12.29□□□□□ -0.44
CHPF2-203ENST00000482173 Q6ZRU5 148 aa12.29□□□□□ -0.44
CHPF2-203ENST00000482173 GATD1Q8NB37 220 aa12.29□□□□□ -0.44
CHPF2-203ENST00000482173 MT1HL1P0DM35 61 aa12.28□□□□□ -0.44
CHPF2-203ENST00000482173 BCL2P10415 239 aa12.28□□□□□ -0.44
CHPF2-203ENST00000482173 CFAP161Q6P656 301 aa12.28□□□□□ -0.44
CHPF2-203ENST00000482173 SPACA4Q8TDM5 124 aa12.28□□□□□ -0.44
CHPF2-203ENST00000482173 TRAV26-2A0A0B4J265 109 aa12.27□□□□□ -0.45
CHPF2-203ENST00000482173 C15orf56Q8N910 161 aa12.27□□□□□ -0.45
CHPF2-203ENST00000482173 CNFNQ9BYD5 112 aa12.27□□□□□ -0.45
CHPF2-203ENST00000482173 AMMECR1LQ6DCA0 310 aa12.26□□□□□ -0.45
CHPF2-203ENST00000482173 RNASE7Q9H1E1 156 aaKnown RBP12.26□□□□□ -0.45
CHPF2-203ENST00000482173 RPP21Q9H633 154 aaKnown RBP12.26□□□□□ -0.45
CHPF2-203ENST00000482173 COX6A2Q02221 97 aa12.25□□□□□ -0.45
CHPF2-203ENST00000482173 RPL39LQ96EH5 51 aaKnown RBP12.25□□□□□ -0.45
CHPF2-203ENST00000482173 PLAC8Q9NZF1 115 aa12.25□□□□□ -0.45
CHPF2-203ENST00000482173 RPS10P46783 165 aaKnown RBP12.24□□□□□ -0.45
CHPF2-203ENST00000482173 HIGD2BQ4VC39 106 aa12.24□□□□□ -0.45
CHPF2-203ENST00000482173 RNASEKQ6P5S7 137 aaKnown RBP12.24□□□□□ -0.45
CHPF2-203ENST00000482173 Q6ZNX1 250 aa12.24□□□□□ -0.45
CHPF2-203ENST00000482173 OCC1Q8TAD7 63 aa12.24□□□□□ -0.45
CHPF2-203ENST00000482173 K7EN84 100 aa12.23□□□□□ -0.45
CHPF2-203ENST00000482173 NCR2O95944 276 aa12.23□□□□□ -0.45
CHPF2-203ENST00000482173 SMIM15Q7Z3B0 74 aa12.23□□□□□ -0.45
CHPF2-203ENST00000482173 CHCHD10Q8WYQ3 142 aaPredicted RBP12.23□□□□□ -0.45
CHPF2-203ENST00000482173 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.22□□□□□ -0.45
CHPF2-203ENST00000482173 IGKV2-29A2NJV5 120 aaPredicted RBP12.22□□□□□ -0.45
CHPF2-203ENST00000482173 PHOX2AO14813 284 aa12.22□□□□□ -0.45
CHPF2-203ENST00000482173 TAGLN2P37802 199 aaKnown RBP12.22□□□□□ -0.45
CHPF2-203ENST00000482173 FOXA3P55318 350 aaPredicted RBP12.22□□□□□ -0.45
CHPF2-203ENST00000482173 C7orf33Q8WU49 177 aa12.22□□□□□ -0.45
CHPF2-203ENST00000482173 GTSF1Q8WW33 167 aa12.22□□□□□ -0.45
CHPF2-203ENST00000482173 H7C423 109 aa12.21□□□□□ -0.45
CHPF2-203ENST00000482173 NDUFS6O75380 124 aaKnown RBP12.21□□□□□ -0.45
CHPF2-203ENST00000482173 APCSP02743 223 aa12.21□□□□□ -0.45
CHPF2-203ENST00000482173 MAJINQ3KP22 176 aa12.21□□□□□ -0.45
CHPF2-203ENST00000482173 SLC51BQ86UW2 128 aa12.21□□□□□ -0.45
CHPF2-203ENST00000482173 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.45
CHPF2-203ENST00000482173 IGKV2-24A0A0C4DH68 120 aa12.2□□□□□ -0.46
CHPF2-203ENST00000482173 FGF6P10767 208 aa12.2□□□□□ -0.46
CHPF2-203ENST00000482173 TEX261Q6UWH6 196 aa12.2□□□□□ -0.46
CHPF2-203ENST00000482173 SDHAF1A6NFY7 115 aa12.19□□□□□ -0.46
CHPF2-203ENST00000482173 UBR4Q5T4S7 5183 aa12.19□□□□□ -0.46
CHPF2-203ENST00000482173 GVQW2A0A096LPI5 108 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-203ENST00000482173 GATCO43716 136 aaKnown RBP12.18□□□□□ -0.46
CHPF2-203ENST00000482173 PMCHP20382 165 aa12.18□□□□□ -0.46
CHPF2-203ENST00000482173 I3L3M4 83 aa12.17□□□□□ -0.46
CHPF2-203ENST00000482173 FOXI1Q12951 378 aa12.17□□□□□ -0.46
CHPF2-203ENST00000482173 TCTE3Q8IZS6 198 aa12.17□□□□□ -0.46
CHPF2-203ENST00000482173 STPG4Q8N801 248 aa12.17□□□□□ -0.46
CHPF2-203ENST00000482173 OR5A1Q8NGJ0 315 aa12.17□□□□□ -0.46
CHPF2-203ENST00000482173 FAM231BA6NCW3 169 aa12.16□□□□□ -0.46
CHPF2-203ENST00000482173 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-203ENST00000482173 XCL1P47992 114 aa12.16□□□□□ -0.46
CHPF2-203ENST00000482173 BTF3L4Q96K17 158 aa12.16□□□□□ -0.46
CHPF2-203ENST00000482173 A8MWL6 223 aa12.15□□□□□ -0.46
CHPF2-203ENST00000482173 LYPD6BQ8NI32 183 aa12.15□□□□□ -0.46
CHPF2-203ENST00000482173 TMEM101Q96IK0 257 aa12.15□□□□□ -0.46
CHPF2-203ENST00000482173 A0A096LNI7 61 aa12.14□□□□□ -0.47
CHPF2-203ENST00000482173 TRBV6-5A0A0K0K1A5 114 aa12.14□□□□□ -0.47
CHPF2-203ENST00000482173 LINC00959A0A1B0GUT2 108 aa12.13□□□□□ -0.47
CHPF2-203ENST00000482173 TMEM250H0YL14 139 aa12.13□□□□□ -0.47
CHPF2-203ENST00000482173 CCL25O15444 150 aa12.13□□□□□ -0.47
CHPF2-203ENST00000482173 PRR3P79522 188 aaKnown RBP12.13□□□□□ -0.47
CHPF2-203ENST00000482173 FAM231DQ6ZW35 169 aa12.13□□□□□ -0.47
CHPF2-203ENST00000482173 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
CHPF2-203ENST00000482173 GAS8-AS1O95177 125 aa12.12□□□□□ -0.47
CHPF2-203ENST00000482173 ESDP10768 282 aa12.12□□□□□ -0.47
CHPF2-203ENST00000482173 BORCS7Q96B45 105 aa12.12□□□□□ -0.47
CHPF2-203ENST00000482173 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
CHPF2-203ENST00000482173 ST20Q9HBF5 79 aa12.12□□□□□ -0.47
CHPF2-203ENST00000482173 TSHBP01222 138 aa12.11□□□□□ -0.47
CHPF2-203ENST00000482173 MRAP2Q96G30 205 aa12.11□□□□□ -0.47
CHPF2-203ENST00000482173 TMEM242Q9NWH2 141 aa12.11□□□□□ -0.47
CHPF2-203ENST00000482173 CEBPGP53567 150 aa12.1□□□□□ -0.47
CHPF2-203ENST00000482173 SS18Q15532 418 aa12.1□□□□□ -0.47
CHPF2-203ENST00000482173 LINC01600Q96MT4 127 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms