RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 HEATR5BQ9P2D3 2071 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 TRAV2A0A0B4J234 112 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 PIGBOS1A0A0B4J2F0 54 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 A0A1W2PPM0 123 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 IGKV2-29A2NJV5 120 aaPredicted RBP1.7□□□□□ -2.14
SF3B1-210ENST00000482158 MIFP14174 115 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 KRTDAPP60985 99 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 TIAM1Q13009 1591 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 DEFB113Q30KQ7 82 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 FREM1Q5H8C1 2179 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 SERP2Q8N6R1 65 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 ZNF431Q8TF32 576 aaPredicted RBP1.7□□□□□ -2.14
SF3B1-210ENST00000482158 TRGV9Q99603 122 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 MGST2Q99735 147 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 ESPL1Q14674 2120 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 AFDNP55196 1824 aaKnown RBP1.7□□□□□ -2.14
SF3B1-210ENST00000482158 COL4A5P29400 1685 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 HELZ2Q9BYK8 2649 aaKnown RBP1.7□□□□□ -2.14
SF3B1-210ENST00000482158 NESP48681 1621 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 NRXN1Q9ULB1 1477 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 UNC13BO14795 1591 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 EDC4Q6P2E9 1401 aaKnown RBP1.69□□□□□ -2.14
SF3B1-210ENST00000482158 ARFGEF1Q9Y6D6 1849 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 TRAV10A0A0B4J240 114 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 TRAV17A0A0B4J275 112 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 NAP1L6A6NFF2 107 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 SYS1-DBNDD2H3BUS1 97 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 CCL16O15467 120 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 PRB4P10163 310 aaPredicted RBP1.69□□□□□ -2.14
SF3B1-210ENST00000482158 GNG11P61952 73 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 C9orf116Q5BN46 136 aaPredicted RBP1.69□□□□□ -2.14
SF3B1-210ENST00000482158 HEPN1Q6WQI6 88 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 C9orf163Q8N9P6 203 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 Q8TAT8 98 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 TMEM254Q8TBM7 123 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 EFCAB5A4FU69 1503 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 A0A1B0GUL6 1792 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 SIPA1L3O60292 1781 aaPredicted RBP1.69□□□□□ -2.14
SF3B1-210ENST00000482158 KDM6BO15054 1643 aa1.69□□□□□ -2.14
SF3B1-210ENST00000482158 ABCC8Q09428 1581 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 SIP14410 1827 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 BAZ2BQ9UIF8 2168 aaKnown RBP1.68□□□□□ -2.14
SF3B1-210ENST00000482158 ANKRD36A6QL64 1941 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 BLMP54132 1417 aaPredicted RBP1.68□□□□□ -2.14
SF3B1-210ENST00000482158 KCPQ6ZWJ8 1503 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 TRAV13-2A0A0B4J235 113 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 TRBV10-3A0A0K0K1G6 114 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 CRYM-AS1A6NIL9 109 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 ERC2-IT1O76042 136 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 ASAH2BP0C7U1 165 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 SPTBP11277 2137 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 WFDC2Q14508 124 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 SPATA45Q537H7 98 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 NMSQ5H8A3 153 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 LYPD5Q6UWN5 251 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 OR8B3Q8NGG8 313 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 ABCA6Q8N139 1617 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 RP1P56715 2156 aa1.68□□□□□ -2.14
SF3B1-210ENST00000482158 ITSN2Q9NZM3 1697 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 LOC285556D6RIA3 1793 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 ABCC1P33527 1531 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 NRXN2Q9P2S2 1712 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 TRBV6-5A0A0K0K1A5 114 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 CXorf51AA0A1B0GTR3 108 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 TCRBV4S1A1TA0A5B7 111 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 HCG22E2RYF7 251 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 H3BUT2 72 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 CXCL8P10145 99 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 GNGT1P63211 74 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 HMGN3Q15651 99 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 RPL7L1Q6DKI1 246 aaKnown RBP1.67□□□□□ -2.14
SF3B1-210ENST00000482158 KRTAP26-1Q6PEX3 210 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 ZNF833PQ6ZTB9 187 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 SPTSSBQ8NFR3 76 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 KRTAP4-1Q9BYQ7 146 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 CYP4F30PQ9H0H9 118 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 NXT2Q9NPJ8 142 aaKnown RBP1.67□□□□□ -2.14
SF3B1-210ENST00000482158 CDC42SE1Q9NRR8 79 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 HIGD1BQ9P298 99 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 LHFPL6Q9Y693 200 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 LRRC9Q6ZRR7 1453 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 FANCD2Q9BXW9 1451 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 DIP2CQ9Y2E4 1556 aa1.67□□□□□ -2.14
SF3B1-210ENST00000482158 KIAA0100Q14667 2235 aaKnown RBP1.66□□□□□ -2.14
SF3B1-210ENST00000482158 TRAV12-1A0A0B4J245 112 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 H7BZZ5 65 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 NDUFC1O43677 76 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 TFF1P04155 84 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 MPV17LQ2QL34 196 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.66□□□□□ -2.14
SF3B1-210ENST00000482158 CYP2G1PQ6ZSU1 146 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 LINC01600Q96MT4 127 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 ODF3Q96PU9 254 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 MROH2BQ7Z745 1585 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 SCN7AQ01118 1682 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 CFAP43Q8NDM7 1665 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 XRN1Q8IZH2 1706 aaKnown RBP1.66□□□□□ -2.14
SF3B1-210ENST00000482158 DUOX2Q9NRD8 1548 aa1.66□□□□□ -2.14
SF3B1-210ENST00000482158 MED12Q93074 2177 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms