RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-218ENST00000482056 A0A0J9YXY3 114 aa11.19□□□□□ -0.62
C9orf3-218ENST00000482056 TINCRA0A1B0GVN0 87 aa11.19□□□□□ -0.62
C9orf3-218ENST00000482056 PRRC2AP48634 2157 aaKnown RBP11.19□□□□□ -0.62
C9orf3-218ENST00000482056 SMCPP49901 116 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-218ENST00000482056 MUSTN1Q8IVN3 82 aa11.19□□□□□ -0.62
C9orf3-218ENST00000482056 IGHV1-58A0A0C4DH39 117 aa11.18□□□□□ -0.62
C9orf3-218ENST00000482056 IGHV3-53P01767 116 aa11.18□□□□□ -0.62
C9orf3-218ENST00000482056 DEFB114Q30KQ6 69 aa11.18□□□□□ -0.62
C9orf3-218ENST00000482056 TMEM263Q8WUH6 116 aaKnown RBP11.18□□□□□ -0.62
C9orf3-218ENST00000482056 CHCHD7Q9BUK0 85 aa11.18□□□□□ -0.62
C9orf3-218ENST00000482056 ACACBO00763 2458 aa11.18□□□□□ -0.62
C9orf3-218ENST00000482056 IGHV3-33P01772 117 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 INSL3P51460 131 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 BEAN1Q3B7T3 259 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 TMEM86BQ8N661 226 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 PPDPFLQ8WWR9 84 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 CLUHP3Q96NS8 147 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 UBE2D4Q9Y2X8 147 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 CREBBPQ92793 2442 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 CEMP1Q6PRD7 247 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-218ENST00000482056 TEN1Q86WV5 123 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 TEX29Q8N6K0 151 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 C11orf72Q8NBR9 251 aa11.17□□□□□ -0.62
C9orf3-218ENST00000482056 NACAE9PAV3 2078 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 TRAV25A0A0B4J276 109 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 RS1O15537 224 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 PRB1P04280 392 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 Q6ZSN1 163 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 FAM104AQ969W3 186 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 Q96MF0 132 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 CRYBG3Q68DQ2 2970 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 PRM2P04554 102 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 Q1RN00 199 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
C9orf3-218ENST00000482056 NDUFA12Q9UI09 145 aa11.16□□□□□ -0.62
C9orf3-218ENST00000482056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-218ENST00000482056 IGKV2-29A2NJV5 120 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-218ENST00000482056 VSIG2Q96IQ7 327 aa11.15□□□□□ -0.62
C9orf3-218ENST00000482056 UTP20O75691 2785 aaKnown RBP11.14□□□□□ -0.63
C9orf3-218ENST00000482056 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
C9orf3-218ENST00000482056 SPANXDQ9BXN6 97 aa11.14□□□□□ -0.63
C9orf3-218ENST00000482056 SPANXCQ9NY87 97 aa11.14□□□□□ -0.63
C9orf3-218ENST00000482056 TRAV8-3A0A0A6YYJ7 113 aa11.14□□□□□ -0.63
C9orf3-218ENST00000482056 KRTAP10-9P60411 292 aa11.14□□□□□ -0.63
C9orf3-218ENST00000482056 STHQ8IWL8 128 aa11.14□□□□□ -0.63
C9orf3-218ENST00000482056 FAM208BQ5VWN6 2430 aa11.13□□□□□ -0.63
C9orf3-218ENST00000482056 H7C2G1 150 aa11.13□□□□□ -0.63
C9orf3-218ENST00000482056 M0QXV9 152 aa11.13□□□□□ -0.63
C9orf3-218ENST00000482056 DGAT2L7PQ6IED9 249 aa11.13□□□□□ -0.63
C9orf3-218ENST00000482056 Q6ZUT4 128 aa11.13□□□□□ -0.63
C9orf3-218ENST00000482056 YAE1D1Q9NRH1 226 aa11.13□□□□□ -0.63
C9orf3-218ENST00000482056 ADARB2-AS1A8MUL3 147 aa11.12□□□□□ -0.63
C9orf3-218ENST00000482056 PRSS2P07478 247 aa11.12□□□□□ -0.63
C9orf3-218ENST00000482056 ATXN8Q156A1 80 aa11.12□□□□□ -0.63
C9orf3-218ENST00000482056 IGHV3-38A0A0C4DH36 116 aa11.12□□□□□ -0.63
C9orf3-218ENST00000482056 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
C9orf3-218ENST00000482056 MIAQ16674 131 aa11.12□□□□□ -0.63
C9orf3-218ENST00000482056 LITAFQ99732 161 aa11.12□□□□□ -0.63
C9orf3-218ENST00000482056 XCL2Q9UBD3 114 aa11.12□□□□□ -0.63
C9orf3-218ENST00000482056 Q9UF83 564 aa11.12□□□□□ -0.63
C9orf3-218ENST00000482056 POLQO75417 2590 aa11.11□□□□□ -0.63
C9orf3-218ENST00000482056 SLC25A20O43772 301 aa11.11□□□□□ -0.63
C9orf3-218ENST00000482056 EIF4EBP3O60516 100 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-218ENST00000482056 ZANQ9Y493 2812 aa11.11□□□□□ -0.63
C9orf3-218ENST00000482056 TRBV30A0A0K0K1B3 111 aa11.1□□□□□ -0.63
C9orf3-218ENST00000482056 C9JAW5 83 aa11.1□□□□□ -0.63
C9orf3-218ENST00000482056 TIRAPP58753 221 aa11.1□□□□□ -0.63
C9orf3-218ENST00000482056 ZFAND6Q6FIF0 208 aa11.1□□□□□ -0.63
C9orf3-218ENST00000482056 Q6ZSV7 163 aa11.1□□□□□ -0.63
C9orf3-218ENST00000482056 TIMM17BO60830 172 aa11.1□□□□□ -0.63
C9orf3-218ENST00000482056 ODF3L2Q3SX64 289 aa11.1□□□□□ -0.63
C9orf3-218ENST00000482056 ANKRD29Q8N6D5 301 aa11.1□□□□□ -0.63
C9orf3-218ENST00000482056 ZNF843Q8N446 348 aa11.09□□□□□ -0.63
C9orf3-218ENST00000482056 RNF183Q96D59 192 aa11.09□□□□□ -0.63
C9orf3-218ENST00000482056 CARD19Q96LW7 228 aa11.09□□□□□ -0.63
C9orf3-218ENST00000482056 MXRA5Q9NR99 2828 aa11.09□□□□□ -0.63
C9orf3-218ENST00000482056 IGHV3OR16-12A0A075B7B8 117 aa11.08□□□□□ -0.64
C9orf3-218ENST00000482056 TRGV1A0A0A0MS02 117 aa11.08□□□□□ -0.64
C9orf3-218ENST00000482056 IFITM1P13164 125 aa11.08□□□□□ -0.64
C9orf3-218ENST00000482056 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
C9orf3-218ENST00000482056 COX6CP09669 75 aa11.08□□□□□ -0.64
C9orf3-218ENST00000482056 HERVK_113P63121 156 aa11.08□□□□□ -0.64
C9orf3-218ENST00000482056 RPL36AP83881 106 aaKnown RBP11.08□□□□□ -0.64
C9orf3-218ENST00000482056 RPL36ALQ969Q0 106 aaKnown RBP11.08□□□□□ -0.64
C9orf3-218ENST00000482056 FBN2P35556 2912 aa11.08□□□□□ -0.64
C9orf3-218ENST00000482056 NAV2Q8IVL1 2488 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 LRRK2Q5S007 2527 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 TRBV10-1A0A0K0K1A3 114 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 TMEM262E9PQX1 116 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 CIRBPQ14011 172 aaKnown RBP11.07□□□□□ -0.64
C9orf3-218ENST00000482056 IL17DQ8TAD2 202 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 BBC3Q96PG8 261 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-218ENST00000482056 ZNF462Q96JM2 2506 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 DNAJC9-AS1A6NH13 148 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 CCL24O00175 119 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 NDUFA1O15239 70 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms