RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 COX19Q49B96 90 aa7.82□□□□□ -1.16
GARNL3-217ENST00000481875 GAGE13Q4V321 117 aa7.82□□□□□ -1.16
GARNL3-217ENST00000481875 CBLN2Q8IUK8 224 aa7.82□□□□□ -1.16
GARNL3-217ENST00000481875 RNF185Q96GF1 192 aa7.82□□□□□ -1.16
GARNL3-217ENST00000481875 TRAV26-2A0A0B4J265 109 aa7.81□□□□□ -1.16
GARNL3-217ENST00000481875 TRBV10-1A0A0K0K1A3 114 aa7.81□□□□□ -1.16
GARNL3-217ENST00000481875 M0QY20 66 aa7.81□□□□□ -1.16
GARNL3-217ENST00000481875 SRIP30626 198 aa7.81□□□□□ -1.16
GARNL3-217ENST00000481875 TIRAPP58753 221 aa7.81□□□□□ -1.16
GARNL3-217ENST00000481875 RPL36AP83881 106 aaKnown RBP7.81□□□□□ -1.16
GARNL3-217ENST00000481875 MRPL51Q4U2R6 128 aaKnown RBP7.81□□□□□ -1.16
GARNL3-217ENST00000481875 GATD1Q8NB37 220 aa7.81□□□□□ -1.16
GARNL3-217ENST00000481875 RPL36ALQ969Q0 106 aaKnown RBP7.81□□□□□ -1.16
GARNL3-217ENST00000481875 MRAP2Q96G30 205 aa7.81□□□□□ -1.16
GARNL3-217ENST00000481875 TNFRSF18Q9Y5U5 241 aa7.81□□□□□ -1.16
GARNL3-217ENST00000481875 FAT1Q14517 4588 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 TRBV24-1A0A075B6N3 115 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 SCO1O75880 301 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 CKS2P33552 79 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 TMEM136Q6ZRR5 245 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 SH2D6Q7Z4S9 175 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 NEXN-AS1Q8NBZ9 246 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 FRZBQ92765 325 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 DNAJC30Q96LL9 226 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 GNB1LQ9BYB4 327 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 NIT2Q9NQR4 276 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 Q9UF83 564 aa7.8□□□□□ -1.16
GARNL3-217ENST00000481875 MYCBP2O75592 4640 aa7.79□□□□□ -1.16
GARNL3-217ENST00000481875 TRBV7-3A0A075B6L6 115 aa7.79□□□□□ -1.16
GARNL3-217ENST00000481875 SMKR1H3BMG3 65 aa7.79□□□□□ -1.16
GARNL3-217ENST00000481875 HLA-DQA1P01909 254 aa7.79□□□□□ -1.16
GARNL3-217ENST00000481875 APCSP02743 223 aa7.79□□□□□ -1.16
GARNL3-217ENST00000481875 OR10J3Q5JRS4 329 aa7.79□□□□□ -1.16
GARNL3-217ENST00000481875 C10orf126Q8N4M7 172 aa7.79□□□□□ -1.16
GARNL3-217ENST00000481875 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.79□□□□□ -1.16
GARNL3-217ENST00000481875 ATP6V0E2Q8NHE4 81 aa7.79□□□□□ -1.16
GARNL3-217ENST00000481875 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
GARNL3-217ENST00000481875 NCR2O95944 276 aa7.78□□□□□ -1.16
GARNL3-217ENST00000481875 PPP1R17O96001 155 aa7.78□□□□□ -1.16
GARNL3-217ENST00000481875 PPBPP02775 128 aa7.78□□□□□ -1.16
GARNL3-217ENST00000481875 MT-ND6P03923 174 aa7.78□□□□□ -1.16
GARNL3-217ENST00000481875 INAFM2P0DMQ5 153 aa7.78□□□□□ -1.16
GARNL3-217ENST00000481875 KRTAP10-1P60331 282 aa7.78□□□□□ -1.16
GARNL3-217ENST00000481875 RPL39LQ96EH5 51 aaKnown RBP7.78□□□□□ -1.16
GARNL3-217ENST00000481875 YPEL4Q96NS1 127 aa7.78□□□□□ -1.16
GARNL3-217ENST00000481875 TRAPPC1Q9Y5R8 145 aa7.78□□□□□ -1.16
GARNL3-217ENST00000481875 D6R8Y8 96 aa7.77□□□□□ -1.17
GARNL3-217ENST00000481875 GAS8-AS1O95177 125 aa7.77□□□□□ -1.17
GARNL3-217ENST00000481875 UBE2D3P61077 147 aa7.77□□□□□ -1.17
GARNL3-217ENST00000481875 UBE2D2P62837 147 aa7.77□□□□□ -1.17
GARNL3-217ENST00000481875 FABP9Q0Z7S8 132 aa7.77□□□□□ -1.17
GARNL3-217ENST00000481875 KIAA1644Q3SXP7 199 aa7.77□□□□□ -1.17
GARNL3-217ENST00000481875 WFDC10BQ8IUB3 73 aa7.77□□□□□ -1.17
GARNL3-217ENST00000481875 ORMDL3Q8N138 153 aa7.77□□□□□ -1.17
GARNL3-217ENST00000481875 ST20Q9HBF5 79 aa7.77□□□□□ -1.17
GARNL3-217ENST00000481875 IGHV3-38A0A0C4DH36 116 aa7.76□□□□□ -1.17
GARNL3-217ENST00000481875 ZNF561-AS1K7EIQ3 104 aa7.76□□□□□ -1.17
GARNL3-217ENST00000481875 GCSHP23434 173 aa7.76□□□□□ -1.17
GARNL3-217ENST00000481875 RPS10P46783 165 aaKnown RBP7.76□□□□□ -1.17
GARNL3-217ENST00000481875 Q5VSD8 79 aa7.76□□□□□ -1.17
GARNL3-217ENST00000481875 NTN5Q8WTR8 489 aaPredicted RBP7.76□□□□□ -1.17
GARNL3-217ENST00000481875 PRELID3AQ96N28 172 aa7.76□□□□□ -1.17
GARNL3-217ENST00000481875 TMEM70Q9BUB7 260 aa7.76□□□□□ -1.17
GARNL3-217ENST00000481875 GTSF1LQ9H1H1 148 aa7.76□□□□□ -1.17
GARNL3-217ENST00000481875 TRBV6-5A0A0K0K1A5 114 aa7.75□□□□□ -1.17
GARNL3-217ENST00000481875 LRCOL1A6NCL2 159 aa7.75□□□□□ -1.17
GARNL3-217ENST00000481875 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
GARNL3-217ENST00000481875 LINC00694P0DN24 101 aa7.75□□□□□ -1.17
GARNL3-217ENST00000481875 PMCHP20382 165 aa7.75□□□□□ -1.17
GARNL3-217ENST00000481875 LINC01556Q5JQF7 62 aa7.75□□□□□ -1.17
GARNL3-217ENST00000481875 DAZ4Q86SG3 579 aaKnown RBP7.75□□□□□ -1.17
GARNL3-217ENST00000481875 NRACQ8N912 160 aa7.75□□□□□ -1.17
GARNL3-217ENST00000481875 DAZ3Q9NR90 486 aaKnown RBP7.75□□□□□ -1.17
GARNL3-217ENST00000481875 SDHAF1A6NFY7 115 aa7.74□□□□□ -1.17
GARNL3-217ENST00000481875 COLCA2A8K830 154 aa7.74□□□□□ -1.17
GARNL3-217ENST00000481875 C20orf78Q9BR46 151 aa7.74□□□□□ -1.17
GARNL3-217ENST00000481875 IBA57-AS1B1ANH7 110 aa7.73□□□□□ -1.17
GARNL3-217ENST00000481875 VCYO14598 125 aa7.73□□□□□ -1.17
GARNL3-217ENST00000481875 PHOX2AO14813 284 aa7.73□□□□□ -1.17
GARNL3-217ENST00000481875 NPYP01303 97 aa7.73□□□□□ -1.17
GARNL3-217ENST00000481875 RAB5AP20339 215 aa7.73□□□□□ -1.17
GARNL3-217ENST00000481875 FUSP35637 526 aaKnown RBP eCLIP7.73□□□□□ -1.17
GARNL3-217ENST00000481875 SUMO2P61956 95 aaKnown RBP7.73□□□□□ -1.17
GARNL3-217ENST00000481875 TMEM97Q5BJF2 176 aa7.73□□□□□ -1.17
GARNL3-217ENST00000481875 DEFB104AQ8WTQ1 72 aa7.73□□□□□ -1.17
GARNL3-217ENST00000481875 LAMTOR2Q9Y2Q5 125 aa7.73□□□□□ -1.17
GARNL3-217ENST00000481875 LOC389332A0A1B0GUA5 103 aa7.72□□□□□ -1.17
GARNL3-217ENST00000481875 I3L3M4 83 aa7.72□□□□□ -1.17
GARNL3-217ENST00000481875 POLR2KP53803 58 aaKnown RBP7.72□□□□□ -1.17
GARNL3-217ENST00000481875 COTL1Q14019 142 aa7.72□□□□□ -1.17
GARNL3-217ENST00000481875 MAP1LC3AQ9H492 121 aa7.72□□□□□ -1.17
GARNL3-217ENST00000481875 TRAV8-6A0A0B4J262 113 aa7.71□□□□□ -1.18
GARNL3-217ENST00000481875 LAGE3Q14657 143 aa7.71□□□□□ -1.18
GARNL3-217ENST00000481875 LELP1Q5T871 98 aa7.71□□□□□ -1.18
GARNL3-217ENST00000481875 ALKBH7Q9BT30 221 aaPredicted RBP7.71□□□□□ -1.18
GARNL3-217ENST00000481875 TRBV6-8A0A0A6YYG3 113 aa7.7□□□□□ -1.18
GARNL3-217ENST00000481875 TRBV27A0A0K0K1C4 114 aa7.7□□□□□ -1.18
GARNL3-217ENST00000481875 TRGC2P03986 189 aa7.7□□□□□ -1.18
GARNL3-217ENST00000481875 FCER1GP30273 86 aa7.7□□□□□ -1.18
GARNL3-217ENST00000481875 KIR2DL4Q99706 377 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms