RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PEAK1Q9H792 1746 aa2□□□□□ -2.09
COPA-203ENST00000481040 RP1L1Q8IWN7 2480 aaPredicted RBP1.99□□□□□ -2.09
COPA-203ENST00000481040 TECTAO75443 2155 aa1.99□□□□□ -2.09
COPA-203ENST00000481040 NCOA6Q14686 2063 aaPredicted RBP1.99□□□□□ -2.09
COPA-203ENST00000481040 CELSR3Q9NYQ7 3312 aa1.99□□□□□ -2.09
COPA-203ENST00000481040 HIGD1CA8MV81 97 aa1.99□□□□□ -2.09
COPA-203ENST00000481040 SNAPC5O75971 98 aa1.99□□□□□ -2.09
COPA-203ENST00000481040 NDUFA11Q86Y39 141 aa1.99□□□□□ -2.09
COPA-203ENST00000481040 PRDM15P57071 1507 aaPredicted RBP1.99□□□□□ -2.09
COPA-203ENST00000481040 SMG1Q96Q15 3661 aaKnown RBP1.99□□□□□ -2.09
COPA-203ENST00000481040 TNRC6CQ9HCJ0 1690 aaKnown RBP1.99□□□□□ -2.09
COPA-203ENST00000481040 MROH1Q8NDA8 1641 aa1.99□□□□□ -2.09
COPA-203ENST00000481040 CEP290O15078 2479 aa1.98□□□□□ -2.09
COPA-203ENST00000481040 MCRIP1C9JLW8 97 aa1.98□□□□□ -2.09
COPA-203ENST00000481040 S100A8P05109 93 aa1.98□□□□□ -2.09
COPA-203ENST00000481040 LYNX1P0DP58 116 aa1.98□□□□□ -2.09
COPA-203ENST00000481040 GNG4P50150 75 aa1.98□□□□□ -2.09
COPA-203ENST00000481040 Q56UQ5 140 aa1.98□□□□□ -2.09
COPA-203ENST00000481040 Q6AWC8 147 aa1.98□□□□□ -2.09
COPA-203ENST00000481040 CCDC88BA6NC98 1476 aa1.98□□□□□ -2.09
COPA-203ENST00000481040 ACACBO00763 2458 aa1.98□□□□□ -2.09
COPA-203ENST00000481040 TPRP12270 2363 aaKnown RBP1.98□□□□□ -2.09
COPA-203ENST00000481040 MUC22E2RYF6 1773 aaPredicted RBP1.98□□□□□ -2.09
COPA-203ENST00000481040 ABCA10Q8WWZ4 1543 aa1.97□□□□□ -2.09
COPA-203ENST00000481040 LOC101927531A0A1B0GV80 90 aa1.97□□□□□ -2.09
COPA-203ENST00000481040 PRB1P04280 392 aa1.97□□□□□ -2.09
COPA-203ENST00000481040 C9orf116Q5BN46 136 aaPredicted RBP1.97□□□□□ -2.09
COPA-203ENST00000481040 RPL7L1Q6DKI1 246 aaKnown RBP1.97□□□□□ -2.09
COPA-203ENST00000481040 IFI27L1Q96BM0 104 aa1.97□□□□□ -2.09
COPA-203ENST00000481040 LAMB1P07942 1786 aa1.97□□□□□ -2.09
COPA-203ENST00000481040 CFAP74Q9C0B2 1584 aa1.97□□□□□ -2.09
COPA-203ENST00000481040 FBN2P35556 2912 aa1.97□□□□□ -2.09
COPA-203ENST00000481040 QRICH2Q9H0J4 1663 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 HELZ2Q9BYK8 2649 aaKnown RBP1.96□□□□□ -2.1
COPA-203ENST00000481040 PZPP20742 1482 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 MYOM2P54296 1465 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 NRXN1Q9ULB1 1477 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 ABCA6Q8N139 1617 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 DLEC1Q9Y238 1755 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 CFAP46Q8IYW2 2715 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 TPPP2P59282 170 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 UBE2G1P62253 170 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 PPP3R1P63098 170 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 S100A7L2Q5SY68 101 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 Q6ZS92 163 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 TSKUQ8WUA8 353 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 SPAG17Q6Q759 2223 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 DAPK1P53355 1430 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 KALRNO60229 2985 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 MAP1BP46821 2468 aaKnown RBP1.96□□□□□ -2.1
COPA-203ENST00000481040 MYO15AQ9UKN7 3530 aa1.96□□□□□ -2.1
COPA-203ENST00000481040 SETD2Q9BYW2 2564 aaPredicted RBP1.96□□□□□ -2.1
COPA-203ENST00000481040 ZFYVE26Q68DK2 2539 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 NCOR2Q9Y618 2525 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 NKTRP30414 1462 aaKnown RBP1.95□□□□□ -2.1
COPA-203ENST00000481040 VPS8Q8N3P4 1428 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 NBDYA0A0U1RRE5 68 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 A6NIN4 97 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 NCR3O14931 201 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 AMELYQ99218 206 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 ASXL1Q8IXJ9 1541 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 DLG5Q8TDM6 1919 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 LAMC1P11047 1609 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 NCOR1O75376 2440 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 ABCA2Q9BZC7 2435 aa1.95□□□□□ -2.1
COPA-203ENST00000481040 MYO9AB2RTY4 2548 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 PKD1L3Q7Z443 1732 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 CLTCQ00610 1675 aaKnown RBP1.94□□□□□ -2.1
COPA-203ENST00000481040 TRAV12-3A0A0B4J271 114 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 TCRBV3S1A0A5B6 114 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 APOC4-APOC2K7ER74 178 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 TNFP01375 233 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 APOC2P02655 101 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 CBLN1P23435 193 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 FXYD3Q14802 87 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 XAF1Q6GPH4 301 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 PRO3102Q9H379 93 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 RPRMQ9NS64 109 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 IER3IP1Q9Y5U9 82 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 CITO14578 2027 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 TEX15Q9BXT5 2789 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 LRRC37A3O60309 1634 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 SPTBP11277 2137 aa1.94□□□□□ -2.1
COPA-203ENST00000481040 ASCC3Q8N3C0 2202 aaKnown RBP1.94□□□□□ -2.1
COPA-203ENST00000481040 FLG2Q5D862 2391 aaPredicted RBP1.93□□□□□ -2.1
COPA-203ENST00000481040 RBBP6Q7Z6E9 1792 aaKnown RBP1.93□□□□□ -2.1
COPA-203ENST00000481040 C12orf73Q69YU5 71 aa1.93□□□□□ -2.1
COPA-203ENST00000481040 MRPL54Q6P161 138 aaKnown RBP1.93□□□□□ -2.1
COPA-203ENST00000481040 Q6ZQY7 126 aa1.93□□□□□ -2.1
COPA-203ENST00000481040 Q6ZSA8 131 aa1.93□□□□□ -2.1
COPA-203ENST00000481040 ACBD7Q8N6N7 88 aa1.93□□□□□ -2.1
COPA-203ENST00000481040 KTN1Q86UP2 1357 aaKnown RBP1.93□□□□□ -2.1
COPA-203ENST00000481040 ARHGAP35Q9NRY4 1499 aa1.93□□□□□ -2.1
COPA-203ENST00000481040 C2CD3Q4AC94 2353 aa1.93□□□□□ -2.1
COPA-203ENST00000481040 KIAA0100Q14667 2235 aaKnown RBP1.93□□□□□ -2.1
COPA-203ENST00000481040 FBN1P35555 2871 aaKnown RBP1.92□□□□□ -2.1
COPA-203ENST00000481040 ERICH3Q5RHP9 1530 aa1.92□□□□□ -2.1
COPA-203ENST00000481040 AFDNP55196 1824 aaKnown RBP1.92□□□□□ -2.1
COPA-203ENST00000481040 TRAV30A0A087WSZ9 112 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms