RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 TRBV10-1A0A0K0K1A3 114 aa4.46□□□□□ -1.69
HERC4-210ENST00000480158 TCAPO15273 167 aa4.46□□□□□ -1.69
HERC4-210ENST00000480158 IFI27P40305 119 aaPredicted RBP4.46□□□□□ -1.69
HERC4-210ENST00000480158 ICOSQ9Y6W8 199 aa4.46□□□□□ -1.69
HERC4-210ENST00000480158 PHOX2AO14813 284 aa4.46□□□□□ -1.7
HERC4-210ENST00000480158 PMCHP20382 165 aa4.46□□□□□ -1.7
HERC4-210ENST00000480158 MRPL23Q16540 153 aaKnown RBP4.46□□□□□ -1.7
HERC4-210ENST00000480158 ATP6V0E2Q8NHE4 81 aa4.46□□□□□ -1.7
HERC4-210ENST00000480158 PRSS3P2Q8NHM4 247 aa4.46□□□□□ -1.7
HERC4-210ENST00000480158 TMEM70Q9BUB7 260 aa4.46□□□□□ -1.7
HERC4-210ENST00000480158 MAP1LC3AQ9H492 121 aa4.46□□□□□ -1.7
HERC4-210ENST00000480158 C1orf196B1AJZ1 125 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 UBE2D3P61077 147 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 UBE2D2P62837 147 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 C18orf32Q8TCD1 76 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 NUPR2A6NF83 97 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST1H2BKO60814 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 PPP1R17O96001 155 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST1H2BJP06899 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST1H2BOP23527 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST1H2BBP33778 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 AKR1D1P51857 326 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST1H2BDP58876 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST1H2BCP62807 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST2H2BEQ16778 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.45□□□□□ -1.7
HERC4-210ENST00000480158 RNASEKQ6P5S7 137 aaKnown RBP4.45□□□□□ -1.7
HERC4-210ENST00000480158 BAGE3Q86Y29 109 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST1H2BHQ93079 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 DNAJC30Q96LL9 226 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST1H2BNQ99877 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 HIST1H2BMQ99879 126 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 SMIM2Q9BVW6 85 aa4.45□□□□□ -1.7
HERC4-210ENST00000480158 KLK5Q9Y337 293 aaPredicted RBP4.45□□□□□ -1.7
HERC4-210ENST00000480158 TRBV6-5A0A0K0K1A5 114 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 LINC00587B1AMM8 73 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 I3L3M4 83 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 VCYO14598 125 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 FCER1GP30273 86 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 POLR2KP53803 58 aaKnown RBP4.44□□□□□ -1.7
HERC4-210ENST00000480158 PMCHL1Q16048 86 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 ESRGQ1W209 222 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 LYSTQ99698 3801 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 C20orf78Q9BR46 151 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 NDUFA6P56556 154 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 COTL1Q14019 142 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 LYPD5Q6UWN5 251 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 NTM-AS1Q6ZSK4 140 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 DAZ4Q86SG3 579 aaKnown RBP4.44□□□□□ -1.7
HERC4-210ENST00000480158 NIT1Q86X76 327 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 KIR2DL4Q99706 377 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 DAZ3Q9NR90 486 aaKnown RBP4.44□□□□□ -1.7
HERC4-210ENST00000480158 LAMTOR2Q9Y2Q5 125 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 STARD9Q9P2P6 4700 aa4.44□□□□□ -1.7
HERC4-210ENST00000480158 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 H3BNG1 76 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 TSHBP01222 138 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 CASC10Q5T4H9 136 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 FA2HQ7L5A8 372 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 C15orf53Q8NAA6 179 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 GTSF1LQ9H1H1 148 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 APLNQ9ULZ1 77 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 IGLV2-18A0A075B6J9 118 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.43□□□□□ -1.7
HERC4-210ENST00000480158 IGKV2-29A2NJV5 120 aaPredicted RBP4.43□□□□□ -1.7
HERC4-210ENST00000480158 NUPR1O60356 82 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 SERF1AO75920 110 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 LINC00614P0C842 121 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 LINC00694P0DN24 101 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 AMTP48728 403 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 RAB5BP61020 215 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 PDZD11Q5EBL8 140 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 Q8N8P6 123 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 URB1-AS1Q96HZ7 61 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 CHCHD5Q9BSY4 110 aa4.43□□□□□ -1.7
HERC4-210ENST00000480158 TRBV6-8A0A0A6YYG3 113 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 TMEM262E9PQX1 116 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 FAM19A2Q8N3H0 131 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 Q8N3U1 123 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 NXT2Q9NPJ8 142 aaKnown RBP4.42□□□□□ -1.7
HERC4-210ENST00000480158 LINC00588Q9Y4M8 146 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 CCL18P55774 89 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 RPL39P62891 51 aaKnown RBP4.42□□□□□ -1.7
HERC4-210ENST00000480158 GAGE6Q13070 117 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 LAGE3Q14657 143 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 WFDC10BQ8IUB3 73 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 UBE2DNLQ8IWF7 75 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
HERC4-210ENST00000480158 TRBV25-1A0A075B6N4 114 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 IGHV1-24A0A0C4DH33 117 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 GAGE10A6NGK3 116 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 HSBP1O75506 76 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 LINC00310P59036 64 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 Q0VG73 95 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 SH2D6Q7Z4S9 175 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 DNAH7Q8WXX0 4024 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 UBE2L6O14933 153 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 SMIM6P0DI80 62 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 GCSHP23434 173 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 Q8N976 141 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms