RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 A0A1B0GVG6 124 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 RAB19A4D1S5 217 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 C5orf52A6NGY3 159 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 H7C423 109 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 K7EN84 100 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 M0R381 172 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 NCR2O95944 276 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 PPP1R17O96001 155 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 SRP19P09132 144 aaKnown RBP3.29□□□□□ -1.88
PTCD3-213ENST00000480102 SMIM17P0DL12 118 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 Q0VG73 95 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 PNRC1Q12796 327 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-213ENST00000480102 PEA15Q15121 130 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 TMEM241Q24JQ0 296 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 NIT1Q86X76 327 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 RMI2Q96E14 147 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 SMIM7Q9BQ49 75 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 SAMD10Q9BYL1 202 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 EIF5A2Q9GZV4 153 aaKnown RBP3.29□□□□□ -1.88
PTCD3-213ENST00000480102 TMEM191AQ9H0A3 160 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 DPH3P1Q9H4G8 78 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 NIT2Q9NQR4 276 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 FAT1Q14517 4588 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 IGLV2-18A0A075B6J9 118 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 GRIFINA4D1Z8 144 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 ZNF727A8MUV8 499 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 TCAPO15273 167 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 GZMBP10144 247 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 NTF3P20783 257 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 ERVFC1-1P60608 527 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 RPL32P62910 135 aaKnown RBP3.28□□□□□ -1.88
PTCD3-213ENST00000480102 RPL19P84098 196 aaKnown RBP3.28□□□□□ -1.88
PTCD3-213ENST00000480102 OR10J3Q5JRS4 329 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 KCNIP4Q6PIL6 250 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 UQCC3Q6UW78 93 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 LYZL1Q6UWQ5 148 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 SMIM15Q7Z3B0 74 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 WFDC10BQ8IUB3 73 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 C15orf54Q8N8G6 183 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 GATD1Q8NB37 220 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 NEXN-AS1Q8NBZ9 246 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 ISOC2Q96AB3 205 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 JPT2Q9H910 190 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 PRR34Q9NV39 138 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 NAT8Q9UHE5 227 aa3.28□□□□□ -1.88
PTCD3-213ENST00000480102 IGKV2D-30A0A075B6S6 120 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 TRAV8-4A0A0B4J246 113 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 A0A1B0GUT8 65 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 A0A1B0GV50 99 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 LINC00862A6NCI5 91 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 M0R2N4 97 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 PPP1R2P9O14990 202 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 GATCO43716 136 aaKnown RBP3.27□□□□□ -1.89
PTCD3-213ENST00000480102 RAB14P61106 215 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 MIAQ16674 131 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 CLLU1Q5K131 121 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 FAM74A4Q5TZK3 123 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 RASL11AQ6T310 242 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 ATP5L2Q7Z4Y8 100 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 C14orf178Q8N769 122 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-213ENST00000480102 MRAP2Q96G30 205 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 NAT8BQ9UHF3 227 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 PAM16Q9Y3D7 125 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 V9GYV3 84 aa3.27□□□□□ -1.89
PTCD3-213ENST00000480102 TRBV24-1A0A075B6N3 115 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 TRBV25-1A0A075B6N4 114 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 A0A087WTM6 91 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 A0A087WX48 190 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 TMSB15BA0A087X1C1 80 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 TRBV27A0A0K0K1C4 114 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 LOC100131303A0A0U1RQF7 123 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 SMIM27A0A1W2PRY6 76 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 LRCOL1A6NCL2 159 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 HIGD1CA8MV81 97 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 PHOX2AO14813 284 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 CCL25O15444 150 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 PPBPP02775 128 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 S100A8P05109 93 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 ZNF25P17030 456 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-213ENST00000480102 NKX2-5P52952 324 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-213ENST00000480102 SNRPEP62304 92 aaKnown RBP3.26□□□□□ -1.89
PTCD3-213ENST00000480102 RPL23P62829 140 aaKnown RBP3.26□□□□□ -1.89
PTCD3-213ENST00000480102 GAGE1Q13065 139 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 GAGE4Q13068 117 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 GAGE5Q13069 117 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 ZNF56Q15929 161 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 BORCS7Q96B45 105 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 IMMP2LQ96T52 175 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 RNASE7Q9H1E1 156 aaKnown RBP3.26□□□□□ -1.89
PTCD3-213ENST00000480102 CSDC2Q9Y534 153 aaKnown RBP3.26□□□□□ -1.89
PTCD3-213ENST00000480102 URGCP-MRPS24S4R325 110 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 DNAH8Q96JB1 4490 aa3.26□□□□□ -1.89
PTCD3-213ENST00000480102 TRAV9-1A0A075B6T8 112 aa3.25□□□□□ -1.89
PTCD3-213ENST00000480102 IGHV3-73A0A0B4J1V6 119 aa3.25□□□□□ -1.89
PTCD3-213ENST00000480102 IGHV1-24A0A0C4DH33 117 aa3.25□□□□□ -1.89
PTCD3-213ENST00000480102 K7EMI3 77 aa3.25□□□□□ -1.89
PTCD3-213ENST00000480102 CEBPGP53567 150 aa3.25□□□□□ -1.89
PTCD3-213ENST00000480102 POLR2KP53803 58 aaKnown RBP3.25□□□□□ -1.89
PTCD3-213ENST00000480102 SMAGPQ0VAQ4 97 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms