RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 COL11A1P12107 1806 aaPredicted RBP3.46□□□□□ -1.86
PBRM1-220ENST00000480064 MYLKQ15746 1914 aa3.46□□□□□ -1.86
PBRM1-220ENST00000480064 GREB1Q4ZG55 1949 aa3.46□□□□□ -1.86
PBRM1-220ENST00000480064 TRAV17A0A0B4J275 112 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 CCL22O00626 93 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 BCE1O60756 84 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 HMGN2P05204 90 aaKnown RBP3.45□□□□□ -1.86
PBRM1-220ENST00000480064 FKBP2P26885 142 aaKnown RBP3.45□□□□□ -1.86
PBRM1-220ENST00000480064 RNASE4P34096 147 aaKnown RBP3.45□□□□□ -1.86
PBRM1-220ENST00000480064 UBE2D3P61077 147 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 NPC2P61916 151 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 UBE2D2P62837 147 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 DEFB121Q5J5C9 76 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 Q5XG85 94 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 TRGV9Q99603 122 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 PLXNA3P51805 1871 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 SHROOM3Q8TF72 1996 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 NINQ8N4C6 2090 aa3.45□□□□□ -1.86
PBRM1-220ENST00000480064 UBE2L5PA0A1B0GUS4 154 aa3.44□□□□□ -1.86
PBRM1-220ENST00000480064 OOSP1A8MZH6 123 aa3.44□□□□□ -1.86
PBRM1-220ENST00000480064 SSR2P43308 183 aa3.44□□□□□ -1.86
PBRM1-220ENST00000480064 DSCR4P56555 118 aaPredicted RBP3.44□□□□□ -1.86
PBRM1-220ENST00000480064 ARHGAP5-AS1Q96IT6 56 aa3.44□□□□□ -1.86
PBRM1-220ENST00000480064 DENND4CQ5VZ89 1909 aa3.44□□□□□ -1.86
PBRM1-220ENST00000480064 KIAA2026Q5HYC2 2103 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 ZNF236Q9UL36 1845 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 TRBV25-1A0A075B6N4 114 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 FAM236AA0A1B0GUQ0 79 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 FAM236BA0A1B0GV22 79 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 RBAKDNA6NC62 111 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 LINC01549A6NIU2 74 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 IGLV3-19P01714 112 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 ATXN8Q156A1 80 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 SERP2Q8N6R1 65 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 WFDC6Q9BQY6 131 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
PBRM1-220ENST00000480064 NXT2Q9NPJ8 142 aaKnown RBP3.43□□□□□ -1.86
PBRM1-220ENST00000480064 IGLV10-54A0A075B6I4 117 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 LOC107984156A0A0G2JMH3 177 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 NDUFC1O43677 76 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 HBDP02042 147 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 COX6CP09669 75 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 FUSP35637 526 aaKnown RBP eCLIP3.42□□□□□ -1.86
PBRM1-220ENST00000480064 PCBD1P61457 104 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 LINC00305Q7Z4B0 112 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 ARL17AQ8IVW1 177 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 ODF3Q96PU9 254 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 Q9BRP9 147 aa3.42□□□□□ -1.86
PBRM1-220ENST00000480064 SHANK1Q9Y566 2161 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 TRBV7-6A0A0J9YX20 115 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 A0A1B0GWA3 101 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 LY6LH3BQJ8 138 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 PLNP26678 52 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 ZNF56Q15929 161 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 SOSTDC1Q6X4U4 206 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 C5orf38Q86SI9 138 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 ZC2HC1AQ96GY0 325 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 TTTY10Q9BZA0 68 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 OBSL1O75147 1896 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 MALRD1Q5VYJ5 2156 aa3.41□□□□□ -1.86
PBRM1-220ENST00000480064 EML6Q6ZMW3 1958 aa3.4□□□□□ -1.86
PBRM1-220ENST00000480064 TMSB15BA0A087X1C1 80 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.4□□□□□ -1.87
PBRM1-220ENST00000480064 IGHV1-58A0A0C4DH39 117 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 E7EQL1 145 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 H3BVH4 76 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 PIRTP0C851 137 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 UBE2D1P51668 147 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 SPANXN5Q5MJ07 72 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 DPH3P1Q9H4G8 78 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 NCKAP5O14513 1909 aa3.4□□□□□ -1.87
PBRM1-220ENST00000480064 CPAMD8Q8IZJ3 1885 aa3.39□□□□□ -1.87
PBRM1-220ENST00000480064 TRBV7-3A0A075B6L6 115 aa3.39□□□□□ -1.87
PBRM1-220ENST00000480064 HIGD1CA8MV81 97 aa3.39□□□□□ -1.87
PBRM1-220ENST00000480064 ARL14EPLP0DKL9 152 aa3.39□□□□□ -1.87
PBRM1-220ENST00000480064 FXYD4P59646 89 aa3.39□□□□□ -1.87
PBRM1-220ENST00000480064 PHF5AQ7RTV0 110 aaKnown RBP3.39□□□□□ -1.87
PBRM1-220ENST00000480064 NDUFA11Q86Y39 141 aa3.39□□□□□ -1.87
PBRM1-220ENST00000480064 PRO1854Q9UHT4 67 aa3.39□□□□□ -1.87
PBRM1-220ENST00000480064 CCL26Q9Y258 94 aa3.39□□□□□ -1.87
PBRM1-220ENST00000480064 LHFPL6Q9Y693 200 aa3.39□□□□□ -1.87
PBRM1-220ENST00000480064 COL4A4P53420 1690 aaPredicted RBP3.39□□□□□ -1.87
PBRM1-220ENST00000480064 XIRP1Q702N8 1843 aaKnown RBP3.38□□□□□ -1.87
PBRM1-220ENST00000480064 A0A1W2PNN7 141 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 LINC01546A6NGU7 62 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 K7EMI3 77 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 CCL16O15467 120 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 TIMM17BO60830 172 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 PGLYRP1O75594 196 aaPredicted RBP3.38□□□□□ -1.87
PBRM1-220ENST00000480064 TMEM155Q4W5P6 130 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 S100A7L2Q5SY68 101 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 Q6ZQT0 140 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 LINC00311Q8N616 119 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 LINC00467Q9BRT7 94 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 ARHGAP32A7KAX9 2087 aa3.38□□□□□ -1.87
PBRM1-220ENST00000480064 UBR3Q6ZT12 1888 aa3.37□□□□□ -1.87
PBRM1-220ENST00000480064 PLXNA4Q9HCM2 1894 aa3.37□□□□□ -1.87
PBRM1-220ENST00000480064 COL5A3P25940 1745 aaPredicted RBP3.37□□□□□ -1.87
PBRM1-220ENST00000480064 TRAV12-1A0A0B4J245 112 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms