RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 CCL19Q99731 98 aa3.18□□□□□ -1.9
SCN2A-205ENST00000480032 MDFIQ99750 246 aa3.18□□□□□ -1.9
SCN2A-205ENST00000480032 IGHV3-53P01767 116 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 INSL3P51460 131 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 A0A0J9YXV3 536 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 C9orf66Q5T8R8 295 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 FLVCR1-AS1Q8TAF5 88 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 WI2-2373I1.2A0A1W2PRP0 233 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 EDN2P20800 178 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 GNLYP22749 145 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 SAA4P35542 130 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 A0A096LNJ9 63 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 IGKV1D-43A0A0B4J1Z2 117 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 IGIPA6NJ69 53 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 CDK2AP2O75956 126 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 COL4A1P02462 1669 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 EML6Q6ZMW3 1958 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 ODF3L1Q8IXM7 274 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 TTTY12Q9BZ98 90 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 NPBQ8NG41 125 aa3.17□□□□□ -1.9
SCN2A-205ENST00000480032 FN1P02751 2386 aaKnown RBP3.16□□□□□ -1.9
SCN2A-205ENST00000480032 FRMPD3Q5JV73 1810 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 TRGV2A0A075B6R0 118 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 IGHV3OR16-9A0A0B4J2B5 98 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 LY6HO94772 140 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 MED13Q9UHV7 2174 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 IGLV11-55A0A075B6I3 123 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 PRSS33Q8NF86 280 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 FAM168AQ92567 244 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 RNASE6Q93091 150 aaKnown RBP3.16□□□□□ -1.9
SCN2A-205ENST00000480032 ANKRD17O75179 2603 aaKnown RBP3.16□□□□□ -1.9
SCN2A-205ENST00000480032 ALPK3Q96L96 1907 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 BSPH1Q075Z2 132 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 Q9UF83 564 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 IGF1P05019 195 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 SPAG11BQ08648 103 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 ATP1A1-AS1Q5TC04 95 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 ENHOQ6UWT2 76 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 KLK9Q9UKQ9 250 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 ARHGEF17Q96PE2 2063 aaPredicted RBP3.16□□□□□ -1.9
SCN2A-205ENST00000480032 IGKV1OR2-108A0A075B7D4 117 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 IGLV5-39A0A0G2JS06 123 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 TRBV6-4A0A1B0GX49 114 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 H7BZZ5 65 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 URB1-AS1Q96HZ7 61 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 PLXNA3P51805 1871 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 ITLN2Q8WWU7 325 aaPredicted RBP3.16□□□□□ -1.9
SCN2A-205ENST00000480032 GAFA1Q96PS6 74 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 TOMM7Q9P0U1 55 aa3.16□□□□□ -1.9
SCN2A-205ENST00000480032 SMCPP49901 116 aaPredicted RBP3.15□□□□□ -1.9
SCN2A-205ENST00000480032 IGLV2-11P01706 119 aa3.15□□□□□ -1.9
SCN2A-205ENST00000480032 IGKV1-16P04430 117 aa3.15□□□□□ -1.9
SCN2A-205ENST00000480032 APOC4P55056 127 aa3.15□□□□□ -1.9
SCN2A-205ENST00000480032 ZNF581Q9P0T4 197 aa3.15□□□□□ -1.9
SCN2A-205ENST00000480032 GREB1Q4ZG55 1949 aa3.15□□□□□ -1.91
SCN2A-205ENST00000480032 I3L2K1 104 aa3.15□□□□□ -1.91
SCN2A-205ENST00000480032 LINC00482Q8N8I6 264 aa3.15□□□□□ -1.91
SCN2A-205ENST00000480032 PTPN13Q12923 2485 aa3.15□□□□□ -1.91
SCN2A-205ENST00000480032 HRKO00198 91 aa3.15□□□□□ -1.91
SCN2A-205ENST00000480032 POLR2AP24928 1970 aaKnown RBP3.15□□□□□ -1.91
SCN2A-205ENST00000480032 SBF1O95248 1867 aa3.15□□□□□ -1.91
SCN2A-205ENST00000480032 BUB1B-PAK6H3BSN5 160 aa3.15□□□□□ -1.91
SCN2A-205ENST00000480032 IGKV3D-7A0A0C4DH55 119 aa3.15□□□□□ -1.91
SCN2A-205ENST00000480032 IGLV1-44P01699 117 aa3.15□□□□□ -1.91
SCN2A-205ENST00000480032 TMEM131Q92545 1883 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 IGKV3D-20A0A0C4DH25 116 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 LOC101927531A0A1B0GV80 90 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 C6orf99Q4VX62 202 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 PATE2Q6UY27 113 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 Q8IZM0 81 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 UBE2E2Q96LR5 201 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 ZNF73O43830 326 aaPredicted RBP3.14□□□□□ -1.91
SCN2A-205ENST00000480032 PIP4P2Q8N4L2 257 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 GPR179Q6PRD1 2367 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 PATE3B3GLJ2 98 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 LINC01547P58512 204 aaPredicted RBP3.14□□□□□ -1.91
SCN2A-205ENST00000480032 BDP1A6H8Y1 2624 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 IGKV1D-17A0A075B6S4 117 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 CLPSP04118 112 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 ZNF837Q96EG3 531 aaPredicted RBP3.14□□□□□ -1.91
SCN2A-205ENST00000480032 CEP295Q9C0D2 2601 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 C20orf204Q6ZNR8 217 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 LY6LH3BQJ8 138 aa3.14□□□□□ -1.91
SCN2A-205ENST00000480032 C9orf116Q5BN46 136 aaPredicted RBP3.14□□□□□ -1.91
SCN2A-205ENST00000480032 IGLV4-3A0A075B6K6 122 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 IGHV3-72A0A0B4J1Y9 119 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 KLLNB2CW77 178 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 IGLV2-18A0A075B6J9 118 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 PATE4P0C8F1 98 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 DSCR9P59020 149 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 KLHL30-AS1Q8NEE0 82 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 WFDC10AQ9H1F0 79 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 HCFC1P51610 2035 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 DEFB131AP59861 70 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 LINC00269Q8N2A0 174 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 Q9BRP9 147 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 DOCK3Q8IZD9 2030 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 NCKAP5O14513 1909 aa3.13□□□□□ -1.91
SCN2A-205ENST00000480032 B9D2Q9BPU9 175 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms