RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 A0A1B0GUV1 79 aa5.89□□□□□ -1.47
GPNMB-211ENST00000479625 CFAP161Q6P656 301 aa5.89□□□□□ -1.47
GPNMB-211ENST00000479625 ZNF471Q9BX82 626 aaPredicted RBP5.89□□□□□ -1.47
GPNMB-211ENST00000479625 PSORS1C2Q9UIG4 136 aa5.89□□□□□ -1.47
GPNMB-211ENST00000479625 MGPP08493 103 aa5.88□□□□□ -1.47
GPNMB-211ENST00000479625 PET100P0DJ07 73 aa5.88□□□□□ -1.47
GPNMB-211ENST00000479625 ATP6V0CP27449 155 aa5.88□□□□□ -1.47
GPNMB-211ENST00000479625 UBE2G1P62253 170 aa5.88□□□□□ -1.47
GPNMB-211ENST00000479625 CYCSP99999 105 aaKnown RBP5.88□□□□□ -1.47
GPNMB-211ENST00000479625 ZNF726P1Q15940 193 aa5.88□□□□□ -1.47
GPNMB-211ENST00000479625 LINC00474Q9P2X8 69 aa5.88□□□□□ -1.47
GPNMB-211ENST00000479625 ZFP30Q9Y2G7 519 aa5.88□□□□□ -1.47
GPNMB-211ENST00000479625 FAM74A7A6NL05 159 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 M0QY20 66 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 UBE2L6O14933 153 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 SNAI2O43623 268 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 NKX2-5P52952 324 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-211ENST00000479625 SPANXN1Q5VSR9 72 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 SUMO4Q6EEV6 95 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 CHCHD10Q8WYQ3 142 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-211ENST00000479625 HIST1H2BAQ96A08 127 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 FMC1Q96HJ9 113 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 CARD19Q96LW7 228 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 AP1S3Q96PC3 154 aa5.87□□□□□ -1.47
GPNMB-211ENST00000479625 PSMG3Q9BT73 122 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-211ENST00000479625 ACTR3CQ9C0K3 210 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-211ENST00000479625 A0A1W2PNN7 141 aa5.86□□□□□ -1.47
GPNMB-211ENST00000479625 LTAP01374 205 aa5.86□□□□□ -1.47
GPNMB-211ENST00000479625 MT-ND6P03923 174 aa5.86□□□□□ -1.47
GPNMB-211ENST00000479625 SMIM17P0DL12 118 aa5.86□□□□□ -1.47
GPNMB-211ENST00000479625 C1orf137Q5JT78 98 aa5.86□□□□□ -1.47
GPNMB-211ENST00000479625 AMTP48728 403 aa5.85□□□□□ -1.47
GPNMB-211ENST00000479625 PTTG1IPP53801 180 aa5.85□□□□□ -1.47
GPNMB-211ENST00000479625 FOXI1Q12951 378 aa5.85□□□□□ -1.47
GPNMB-211ENST00000479625 GAGE2BQ13066 116 aa5.85□□□□□ -1.47
GPNMB-211ENST00000479625 MBP02144 154 aa5.84□□□□□ -1.47
GPNMB-211ENST00000479625 CXCL1P09341 107 aa5.84□□□□□ -1.47
GPNMB-211ENST00000479625 OR5AL1P0C617 328 aa5.84□□□□□ -1.47
GPNMB-211ENST00000479625 MZT2BQ6NZ67 158 aa5.84□□□□□ -1.47
GPNMB-211ENST00000479625 PHF5AQ7RTV0 110 aaKnown RBP5.84□□□□□ -1.47
GPNMB-211ENST00000479625 ENKURQ8TC29 256 aa5.84□□□□□ -1.47
GPNMB-211ENST00000479625 CCDC32Q9BV29 185 aa5.84□□□□□ -1.47
GPNMB-211ENST00000479625 CTXND1A0A1B0GTU2 59 aa5.83□□□□□ -1.48
GPNMB-211ENST00000479625 KRTAP1-4P0C5Y4 121 aa5.83□□□□□ -1.48
GPNMB-211ENST00000479625 BCL2P10415 239 aa5.83□□□□□ -1.48
GPNMB-211ENST00000479625 AKR1C3P42330 323 aa5.83□□□□□ -1.48
GPNMB-211ENST00000479625 XCL1P47992 114 aa5.83□□□□□ -1.48
GPNMB-211ENST00000479625 SERF2P84101 59 aa5.83□□□□□ -1.48
GPNMB-211ENST00000479625 PGLYRP4Q96LB8 373 aa5.83□□□□□ -1.48
GPNMB-211ENST00000479625 TNFSF18Q9UNG2 199 aa5.83□□□□□ -1.48
GPNMB-211ENST00000479625 PKIGQ9Y2B9 76 aa5.83□□□□□ -1.48
GPNMB-211ENST00000479625 INMT-MINDY4F8WBC2 141 aa5.82□□□□□ -1.48
GPNMB-211ENST00000479625 H0Y9J4 135 aa5.82□□□□□ -1.48
GPNMB-211ENST00000479625 SSNA1O43805 119 aa5.82□□□□□ -1.48
GPNMB-211ENST00000479625 IGLV7-43P04211 117 aa5.82□□□□□ -1.48
GPNMB-211ENST00000479625 SYCNQ0VAF6 134 aa5.82□□□□□ -1.48
GPNMB-211ENST00000479625 C9orf116Q5BN46 136 aaPredicted RBP5.82□□□□□ -1.48
GPNMB-211ENST00000479625 RASL11AQ6T310 242 aa5.82□□□□□ -1.48
GPNMB-211ENST00000479625 FER1L6-AS1Q8NA97 138 aa5.82□□□□□ -1.48
GPNMB-211ENST00000479625 DIRC1Q969H9 104 aa5.82□□□□□ -1.48
GPNMB-211ENST00000479625 TPPP3Q9BW30 176 aa5.82□□□□□ -1.48
GPNMB-211ENST00000479625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-211ENST00000479625 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
GPNMB-211ENST00000479625 IGKV2-29A2NJV5 120 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-211ENST00000479625 COTL1Q14019 142 aa5.81□□□□□ -1.48
GPNMB-211ENST00000479625 RNASEKQ6P5S7 137 aaKnown RBP5.81□□□□□ -1.48
GPNMB-211ENST00000479625 KRTAP11-1Q8IUC1 163 aa5.81□□□□□ -1.48
GPNMB-211ENST00000479625 NKX6-2Q9C056 277 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-211ENST00000479625 IGLV1-50A0A075B6I6 118 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 IGHV1-58A0A0C4DH39 117 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 LOC107984640A0A0U1RRK4 108 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 CCL25O15444 150 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 DEFA1P59665 94 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 CST9LP1Q5W188 147 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 AMMECR1LQ6DCA0 310 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 Q6ZNX1 250 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 STOML3Q8TAV4 291 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 MLST8Q9BVC4 326 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 NIT2Q9NQR4 276 aa5.8□□□□□ -1.48
GPNMB-211ENST00000479625 MAP1LC3B2A6NCE7 125 aa5.79□□□□□ -1.48
GPNMB-211ENST00000479625 CAMPP49913 170 aa5.79□□□□□ -1.48
GPNMB-211ENST00000479625 UBE2D1P51668 147 aa5.79□□□□□ -1.48
GPNMB-211ENST00000479625 RPL7L1Q6DKI1 246 aaKnown RBP5.79□□□□□ -1.48
GPNMB-211ENST00000479625 MAP1LC3BQ9GZQ8 125 aa5.79□□□□□ -1.48
GPNMB-211ENST00000479625 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
GPNMB-211ENST00000479625 IGLV4-69A0A075B6H9 119 aa5.78□□□□□ -1.48
GPNMB-211ENST00000479625 TSPAN13O95857 204 aa5.78□□□□□ -1.48
GPNMB-211ENST00000479625 IGLC6P0CF74 106 aa5.78□□□□□ -1.48
GPNMB-211ENST00000479625 FGF6P10767 208 aa5.78□□□□□ -1.48
GPNMB-211ENST00000479625 NTF3P20783 257 aa5.78□□□□□ -1.48
GPNMB-211ENST00000479625 RPL18AQ02543 176 aaKnown RBP5.78□□□□□ -1.48
GPNMB-211ENST00000479625 OR5A1Q8NGJ0 315 aa5.78□□□□□ -1.48
GPNMB-211ENST00000479625 LINC00959A0A1B0GUT2 108 aa5.77□□□□□ -1.49
GPNMB-211ENST00000479625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-211ENST00000479625 PAGE4O60829 102 aa5.77□□□□□ -1.49
GPNMB-211ENST00000479625 EIF5AP63241 154 aaKnown RBP5.77□□□□□ -1.49
GPNMB-211ENST00000479625 IFITM3Q01628 133 aa5.77□□□□□ -1.49
GPNMB-211ENST00000479625 MEF2BQ02080 365 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-211ENST00000479625 BAGE2Q86Y30 109 aa5.77□□□□□ -1.49
GPNMB-211ENST00000479625 NUP35Q8NFH5 326 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms