RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 UTP20O75691 2785 aaKnown RBP6.22□□□□□ -1.41
USP30-206ENST00000479219 DUX3Q96PT4 197 aa6.22□□□□□ -1.41
USP30-206ENST00000479219 PRO1854Q9UHT4 67 aa6.22□□□□□ -1.41
USP30-206ENST00000479219 USP9YO00507 2555 aaPredicted RBP6.22□□□□□ -1.41
USP30-206ENST00000479219 INSP01308 110 aa6.22□□□□□ -1.41
USP30-206ENST00000479219 IGHV3-30P01768 117 aa6.22□□□□□ -1.41
USP30-206ENST00000479219 CFC1BP0CG36 223 aa6.22□□□□□ -1.41
USP30-206ENST00000479219 CFC1P0CG37 223 aa6.22□□□□□ -1.41
USP30-206ENST00000479219 IGHV3-30-5P0DP03 117 aa6.22□□□□□ -1.41
USP30-206ENST00000479219 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
USP30-206ENST00000479219 TMEM61Q8N0U2 210 aa6.22□□□□□ -1.41
USP30-206ENST00000479219 KNCNA6PVL3 124 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 F8WDY8 70 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 SLC25A20O43772 301 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 LGALS3P17931 250 aaKnown RBP6.21□□□□□ -1.42
USP30-206ENST00000479219 SLC25A29Q8N8R3 303 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 KLHL30-AS1Q8NEE0 82 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 DNAJC30Q96LL9 226 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 CREBBPQ92793 2442 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 DOPEY2Q9Y3R5 2298 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 SNCGO76070 127 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 KHDC1LQ5JSQ8 128 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
USP30-206ENST00000479219 CSDC2Q9Y534 153 aaKnown RBP6.21□□□□□ -1.42
USP30-206ENST00000479219 ZNF462Q96JM2 2506 aa6.2□□□□□ -1.42
USP30-206ENST00000479219 LEPROTO15243 131 aa6.2□□□□□ -1.42
USP30-206ENST00000479219 DEFB136Q30KP8 78 aa6.2□□□□□ -1.42
USP30-206ENST00000479219 DEFB114Q30KQ6 69 aa6.2□□□□□ -1.42
USP30-206ENST00000479219 LRRK2Q5S007 2527 aa6.2□□□□□ -1.42
USP30-206ENST00000479219 MAP1AP78559 2803 aaPredicted RBP6.2□□□□□ -1.42
USP30-206ENST00000479219 J3QQQ9 107 aa6.2□□□□□ -1.42
USP30-206ENST00000479219 KRTAP10-9P60411 292 aa6.2□□□□□ -1.42
USP30-206ENST00000479219 PPDPFQ9H3Y8 114 aa6.2□□□□□ -1.42
USP30-206ENST00000479219 CRYBG3Q68DQ2 2970 aa6.2□□□□□ -1.42
USP30-206ENST00000479219 C9JAW5 83 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 RBMY1A1P0DJD3 496 aaKnown RBP6.19□□□□□ -1.42
USP30-206ENST00000479219 RBMY1CP0DJD4 496 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 P0DMU3 169 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 FAM231AP0DMU4 169 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 FAM231CP0DMU5 169 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
USP30-206ENST00000479219 CMC4P56277 68 aaPredicted RBP6.19□□□□□ -1.42
USP30-206ENST00000479219 RBMY1FQ15415 496 aaKnown RBP6.19□□□□□ -1.42
USP30-206ENST00000479219 ZNRF2Q8NHG8 242 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 SPANXA1Q9NS26 97 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 TMEM223A0PJW6 202 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 NHLRC4P0CG21 123 aaPredicted RBP6.19□□□□□ -1.42
USP30-206ENST00000479219 Q6Q795 121 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 IGLV4-3A0A075B6K6 122 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 GAGE12JA6NER3 117 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 GAGE7O76087 117 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 GAGE12FP0CL80 117 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 GAGE12GP0CL81 117 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 GAGE12IP0CL82 117 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 GAGE4Q13068 117 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 BEAN1Q3B7T3 259 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 KRTAP1-3Q8IUG1 177 aa6.19□□□□□ -1.42
USP30-206ENST00000479219 VPS13CQ709C8 3753 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 NAV2Q8IVL1 2488 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 RBMY1BA6NDE4 496 aaKnown RBP6.18□□□□□ -1.42
USP30-206ENST00000479219 RBMY1EA6NEQ0 496 aaKnown RBP6.18□□□□□ -1.42
USP30-206ENST00000479219 RBMY1DP0C7P1 496 aaKnown RBP6.18□□□□□ -1.42
USP30-206ENST00000479219 C18orf65Q6ZTR6 163 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 LINC01587Q99440 93 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 ZFHX3Q15911 3703 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 A0A0B4J2C4 111 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 IGHV3-53P01767 116 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 CD28P10747 220 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 IFITM1P13164 125 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 HTN1P15515 57 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 TSPEAR-AS2P59090 65 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 TTC32Q5I0X7 151 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 Q6ZSV7 163 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 AMELXQ99217 191 aa6.18□□□□□ -1.42
USP30-206ENST00000479219 DNAJC9-AS1A6NH13 148 aa6.17□□□□□ -1.42
USP30-206ENST00000479219 IGHV3-33P01772 117 aa6.17□□□□□ -1.42
USP30-206ENST00000479219 PLA2G2AP14555 144 aa6.17□□□□□ -1.42
USP30-206ENST00000479219 EMP1P54849 157 aa6.17□□□□□ -1.42
USP30-206ENST00000479219 ATXN8Q156A1 80 aa6.17□□□□□ -1.42
USP30-206ENST00000479219 C11orf72Q8NBR9 251 aa6.17□□□□□ -1.42
USP30-206ENST00000479219 LINC01600Q96MT4 127 aa6.17□□□□□ -1.42
USP30-206ENST00000479219 FBN2P35556 2912 aa6.17□□□□□ -1.42
USP30-206ENST00000479219 ZNF22P17026 224 aaPredicted RBP6.17□□□□□ -1.42
USP30-206ENST00000479219 MRPS36P82909 103 aaKnown RBP6.17□□□□□ -1.42
USP30-206ENST00000479219 PTPN13Q12923 2485 aa6.17□□□□□ -1.42
USP30-206ENST00000479219 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.16□□□□□ -1.42
USP30-206ENST00000479219 TRAV4A0A0B4J268 109 aa6.16□□□□□ -1.42
USP30-206ENST00000479219 RS1O15537 224 aa6.16□□□□□ -1.42
USP30-206ENST00000479219 RPL13AP40429 203 aaKnown RBP6.16□□□□□ -1.42
USP30-206ENST00000479219 STHQ8IWL8 128 aa6.16□□□□□ -1.42
USP30-206ENST00000479219 TMEM263Q8WUH6 116 aaKnown RBP6.16□□□□□ -1.42
USP30-206ENST00000479219 NACAE9PAV3 2078 aa6.16□□□□□ -1.42
USP30-206ENST00000479219 MXRA5Q9NR99 2828 aa6.16□□□□□ -1.42
USP30-206ENST00000479219 TRAV8-4A0A0B4J246 113 aa6.16□□□□□ -1.42
USP30-206ENST00000479219 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
USP30-206ENST00000479219 TENM4Q6N022 2769 aa6.16□□□□□ -1.42
USP30-206ENST00000479219 ZANQ9Y493 2812 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms