RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 LINC00588Q9Y4M8 146 aa9.38□□□□□ -0.91
SMARCAL1-211ENST00000479008 TENM2Q9NT68 2774 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST1H2BKO60814 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST1H2BJP06899 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST1H2BOP23527 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST1H2BBP33778 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST1H2BDP58876 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST1H2BCP62807 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST2H2BEQ16778 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST1H2BHQ93079 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST1H2BNQ99877 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 HIST1H2BMQ99879 126 aa9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 MRPS16Q9Y3D3 137 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-211ENST00000479008 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
SMARCAL1-211ENST00000479008 Q0VG73 95 aa9.36□□□□□ -0.91
SMARCAL1-211ENST00000479008 NIT1Q86X76 327 aa9.36□□□□□ -0.91
SMARCAL1-211ENST00000479008 BAGE3Q86Y29 109 aa9.36□□□□□ -0.91
SMARCAL1-211ENST00000479008 URB1-AS1Q96HZ7 61 aa9.36□□□□□ -0.91
SMARCAL1-211ENST00000479008 TMEM243Q9BU79 118 aa9.36□□□□□ -0.91
SMARCAL1-211ENST00000479008 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
SMARCAL1-211ENST00000479008 RAB5BP61020 215 aa9.35□□□□□ -0.91
SMARCAL1-211ENST00000479008 LAGE3Q14657 143 aa9.35□□□□□ -0.91
SMARCAL1-211ENST00000479008 RNASEKQ6P5S7 137 aaKnown RBP9.35□□□□□ -0.91
SMARCAL1-211ENST00000479008 WFDC10BQ8IUB3 73 aa9.35□□□□□ -0.91
SMARCAL1-211ENST00000479008 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
SMARCAL1-211ENST00000479008 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-211ENST00000479008 IGKV2-29A2NJV5 120 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-211ENST00000479008 K7EMI3 77 aa9.34□□□□□ -0.91
SMARCAL1-211ENST00000479008 UBE2L6O14933 153 aa9.34□□□□□ -0.91
SMARCAL1-211ENST00000479008 LINC00614P0C842 121 aa9.34□□□□□ -0.91
SMARCAL1-211ENST00000479008 ESDP10768 282 aa9.34□□□□□ -0.91
SMARCAL1-211ENST00000479008 ORMDL2Q53FV1 153 aa9.34□□□□□ -0.91
SMARCAL1-211ENST00000479008 AP5S1Q9NUS5 200 aa9.34□□□□□ -0.91
SMARCAL1-211ENST00000479008 LINC01546A6NGU7 62 aa9.33□□□□□ -0.92
SMARCAL1-211ENST00000479008 GAGE6Q13070 117 aa9.33□□□□□ -0.92
SMARCAL1-211ENST00000479008 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
SMARCAL1-211ENST00000479008 VPS13DQ5THJ4 4388 aa9.33□□□□□ -0.92
SMARCAL1-211ENST00000479008 TMEM262E9PQX1 116 aa9.32□□□□□ -0.92
SMARCAL1-211ENST00000479008 SERF1AO75920 110 aa9.32□□□□□ -0.92
SMARCAL1-211ENST00000479008 LGALS9CQ6DKI2 356 aa9.32□□□□□ -0.92
SMARCAL1-211ENST00000479008 C20orf203Q8NBC4 194 aa9.32□□□□□ -0.92
SMARCAL1-211ENST00000479008 CHCHD1Q96BP2 118 aaKnown RBP9.32□□□□□ -0.92
SMARCAL1-211ENST00000479008 ALMS1Q8TCU4 4167 aa9.31□□□□□ -0.92
SMARCAL1-211ENST00000479008 SIVA1O15304 175 aa9.31□□□□□ -0.92
SMARCAL1-211ENST00000479008 BTF3P20290 206 aaKnown RBP9.31□□□□□ -0.92
SMARCAL1-211ENST00000479008 NDUFA6P56556 154 aa9.31□□□□□ -0.92
SMARCAL1-211ENST00000479008 LINC00310P59036 64 aa9.31□□□□□ -0.92
SMARCAL1-211ENST00000479008 RPL39P62891 51 aaKnown RBP9.31□□□□□ -0.92
SMARCAL1-211ENST00000479008 TMEM18Q96B42 140 aa9.31□□□□□ -0.92
SMARCAL1-211ENST00000479008 H7C423 109 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 HSBP1O75506 76 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 LY6G6CO95867 125 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 IGHV3-30P01768 117 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 IGHV3-33P01772 117 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 IGHV3-30-3P0DP02 117 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 IGHV3-30-5P0DP03 117 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 PKIAP61925 76 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 PMCHL1Q16048 86 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 C2orf66Q6UXQ4 117 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 Q8N3U1 123 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 LINC00476Q8WZB0 136 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 CYSLTR1Q9Y271 337 aa9.3□□□□□ -0.92
SMARCAL1-211ENST00000479008 A0A087WX48 190 aa9.29□□□□□ -0.92
SMARCAL1-211ENST00000479008 NUPR1O60356 82 aa9.29□□□□□ -0.92
SMARCAL1-211ENST00000479008 FGF6P10767 208 aa9.29□□□□□ -0.92
SMARCAL1-211ENST00000479008 G0S2P27469 103 aa9.29□□□□□ -0.92
SMARCAL1-211ENST00000479008 MPV17L2Q567V2 206 aa9.29□□□□□ -0.92
SMARCAL1-211ENST00000479008 Q9H8V8 135 aa9.29□□□□□ -0.92
SMARCAL1-211ENST00000479008 DNAH1Q9P2D7 4330 aa9.29□□□□□ -0.92
SMARCAL1-211ENST00000479008 HBDP02042 147 aa9.28□□□□□ -0.92
SMARCAL1-211ENST00000479008 DNAH10OSP0CZ25 163 aa9.28□□□□□ -0.92
SMARCAL1-211ENST00000479008 RBX1P62877 108 aa9.28□□□□□ -0.92
SMARCAL1-211ENST00000479008 LINC01556Q5JQF7 62 aa9.28□□□□□ -0.92
SMARCAL1-211ENST00000479008 Q8N976 141 aa9.28□□□□□ -0.92
SMARCAL1-211ENST00000479008 UBE2D4Q9Y2X8 147 aa9.28□□□□□ -0.92
SMARCAL1-211ENST00000479008 A0A096LNJ9 63 aa9.27□□□□□ -0.93
SMARCAL1-211ENST00000479008 SMAGPQ0VAQ4 97 aa9.27□□□□□ -0.93
SMARCAL1-211ENST00000479008 COA6Q5JTJ3 125 aaKnown RBP9.27□□□□□ -0.93
SMARCAL1-211ENST00000479008 MRPL52Q86TS9 123 aaKnown RBP9.27□□□□□ -0.93
SMARCAL1-211ENST00000479008 FAM19A2Q8N3H0 131 aa9.27□□□□□ -0.93
SMARCAL1-211ENST00000479008 TOMM6Q96B49 74 aa9.27□□□□□ -0.93
SMARCAL1-211ENST00000479008 IGLV4-60A0A075B6I1 120 aa9.26□□□□□ -0.93
SMARCAL1-211ENST00000479008 ZNF25P17030 456 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-211ENST00000479008 DGAT2L7PQ6IED9 249 aa9.26□□□□□ -0.93
SMARCAL1-211ENST00000479008 OR5A1Q8NGJ0 315 aa9.26□□□□□ -0.93
SMARCAL1-211ENST00000479008 TMEM101Q96IK0 257 aa9.26□□□□□ -0.93
SMARCAL1-211ENST00000479008 TIMM21Q9BVV7 248 aa9.26□□□□□ -0.93
SMARCAL1-211ENST00000479008 SPANXA1Q9NS26 97 aa9.26□□□□□ -0.93
SMARCAL1-211ENST00000479008 LYSTQ99698 3801 aa9.26□□□□□ -0.93
SMARCAL1-211ENST00000479008 A0A1B0GUV1 79 aa9.25□□□□□ -0.93
SMARCAL1-211ENST00000479008 ANGP03950 147 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-211ENST00000479008 S100A6P06703 90 aa9.25□□□□□ -0.93
SMARCAL1-211ENST00000479008 SCGB3A1Q96QR1 104 aa9.25□□□□□ -0.93
SMARCAL1-211ENST00000479008 LINC01549A6NIU2 74 aa9.24□□□□□ -0.93
SMARCAL1-211ENST00000479008 Q6ZUT4 128 aa9.24□□□□□ -0.93
SMARCAL1-211ENST00000479008 OPRPNQ99935 248 aaPredicted RBP9.24□□□□□ -0.93
SMARCAL1-211ENST00000479008 KLK12Q9UKR0 248 aa9.24□□□□□ -0.93
SMARCAL1-211ENST00000479008 TMA7Q9Y2S6 64 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms