RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 GAS8-AS1O95177 125 aa11□□□□□ -0.65
PDZRN3-207ENST00000478209 ANGP03950 147 aaKnown RBP11□□□□□ -0.65
PDZRN3-207ENST00000478209 PMCHP20382 165 aa11□□□□□ -0.65
PDZRN3-207ENST00000478209 SPATA12Q7Z6I5 190 aa11□□□□□ -0.65
PDZRN3-207ENST00000478209 COX11Q9Y6N1 276 aa11□□□□□ -0.65
PDZRN3-207ENST00000478209 SMKR1H3BMG3 65 aa10.99□□□□□ -0.65
PDZRN3-207ENST00000478209 I3L3M4 83 aa10.99□□□□□ -0.65
PDZRN3-207ENST00000478209 APCSP02743 223 aa10.99□□□□□ -0.65
PDZRN3-207ENST00000478209 RPS10P46783 165 aaKnown RBP10.99□□□□□ -0.65
PDZRN3-207ENST00000478209 RBX1P62877 108 aa10.99□□□□□ -0.65
PDZRN3-207ENST00000478209 Q0VG73 95 aa10.99□□□□□ -0.65
PDZRN3-207ENST00000478209 MRPL51Q4U2R6 128 aaKnown RBP10.99□□□□□ -0.65
PDZRN3-207ENST00000478209 Q8N976 141 aa10.99□□□□□ -0.65
PDZRN3-207ENST00000478209 TMEM70Q9BUB7 260 aa10.99□□□□□ -0.65
PDZRN3-207ENST00000478209 IGKV2D-24A0A075B6R9 120 aa10.98□□□□□ -0.65
PDZRN3-207ENST00000478209 HECTD4Q9Y4D8 3996 aa10.98□□□□□ -0.65
PDZRN3-207ENST00000478209 C16orf90A8MZG2 172 aa10.97□□□□□ -0.65
PDZRN3-207ENST00000478209 CKS2P33552 79 aa10.97□□□□□ -0.65
PDZRN3-207ENST00000478209 CTDSP1Q9GZU7 261 aa10.97□□□□□ -0.65
PDZRN3-207ENST00000478209 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.65
PDZRN3-207ENST00000478209 NRACQ8N912 160 aa10.96□□□□□ -0.65
PDZRN3-207ENST00000478209 BTF3L4Q96K17 158 aa10.96□□□□□ -0.65
PDZRN3-207ENST00000478209 TMEM242Q9NWH2 141 aa10.96□□□□□ -0.65
PDZRN3-207ENST00000478209 TRBV27A0A0K0K1C4 114 aa10.95□□□□□ -0.66
PDZRN3-207ENST00000478209 A0A1B0GUV1 79 aa10.95□□□□□ -0.66
PDZRN3-207ENST00000478209 KRTAP10-2P60368 255 aa10.95□□□□□ -0.66
PDZRN3-207ENST00000478209 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
PDZRN3-207ENST00000478209 MIAQ16674 131 aa10.95□□□□□ -0.66
PDZRN3-207ENST00000478209 ENHOQ6UWT2 76 aa10.95□□□□□ -0.66
PDZRN3-207ENST00000478209 IMMP2LQ96T52 175 aa10.95□□□□□ -0.66
PDZRN3-207ENST00000478209 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
PDZRN3-207ENST00000478209 LRCOL1A6NCL2 159 aa10.94□□□□□ -0.66
PDZRN3-207ENST00000478209 H7C423 109 aa10.94□□□□□ -0.66
PDZRN3-207ENST00000478209 VCYO14598 125 aa10.94□□□□□ -0.66
PDZRN3-207ENST00000478209 PPBPP02775 128 aa10.94□□□□□ -0.66
PDZRN3-207ENST00000478209 AMMECR1LQ6DCA0 310 aa10.94□□□□□ -0.66
PDZRN3-207ENST00000478209 CLPSL2Q6UWE3 100 aa10.94□□□□□ -0.66
PDZRN3-207ENST00000478209 LINC00269Q8N2A0 174 aa10.94□□□□□ -0.66
PDZRN3-207ENST00000478209 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
PDZRN3-207ENST00000478209 CARHSP1Q9Y2V2 147 aaKnown RBP10.94□□□□□ -0.66
PDZRN3-207ENST00000478209 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 D6R8Y8 96 aa10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 TSHBP01222 138 aa10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 FCER1GP30273 86 aa10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 C10orf91Q5T1B1 145 aa10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 CDPF1Q6NVV7 123 aa10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 C20orf203Q8NBC4 194 aa10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 KIR2DL4Q99706 377 aa10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 C20orf78Q9BR46 151 aa10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 PRR34Q9NV39 138 aa10.93□□□□□ -0.66
PDZRN3-207ENST00000478209 IGLV4-60A0A075B6I1 120 aa10.92□□□□□ -0.66
PDZRN3-207ENST00000478209 TNFRSF6BO95407 300 aa10.92□□□□□ -0.66
PDZRN3-207ENST00000478209 S100PP25815 95 aa10.92□□□□□ -0.66
PDZRN3-207ENST00000478209 REG3AQ06141 175 aa10.92□□□□□ -0.66
PDZRN3-207ENST00000478209 RNASEKQ6P5S7 137 aaKnown RBP10.92□□□□□ -0.66
PDZRN3-207ENST00000478209 TRBV24-1A0A075B6N3 115 aa10.91□□□□□ -0.66
PDZRN3-207ENST00000478209 TRAV9-1A0A075B6T8 112 aa10.91□□□□□ -0.66
PDZRN3-207ENST00000478209 PHOX2AO14813 284 aa10.91□□□□□ -0.66
PDZRN3-207ENST00000478209 ORMDL3Q8N138 153 aa10.91□□□□□ -0.66
PDZRN3-207ENST00000478209 C7orf77A4D0Y5 90 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 NPYP01303 97 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 FGF6P10767 208 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 ESDP10768 282 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 ZNF25P17030 456 aaPredicted RBP10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 RPL32P62910 135 aaKnown RBP10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 RHEBQ15382 184 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 NDUFA5Q16718 116 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 TMEM136Q6ZRR5 245 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 Q8N814 137 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 CLRN3Q8NCR9 226 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 BAALCQ8WXS3 180 aa10.9□□□□□ -0.66
PDZRN3-207ENST00000478209 LECT2O14960 151 aa10.89□□□□□ -0.67
PDZRN3-207ENST00000478209 TCAPO15273 167 aa10.89□□□□□ -0.67
PDZRN3-207ENST00000478209 MAPKAPK5-AS1Q8N8E1 139 aa10.89□□□□□ -0.67
PDZRN3-207ENST00000478209 NTN5Q8WTR8 489 aaPredicted RBP10.89□□□□□ -0.67
PDZRN3-207ENST00000478209 TMEM101Q96IK0 257 aa10.89□□□□□ -0.67
PDZRN3-207ENST00000478209 PRELID3AQ96N28 172 aa10.89□□□□□ -0.67
PDZRN3-207ENST00000478209 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
PDZRN3-207ENST00000478209 RPS10P5Q9NQ39 176 aa10.89□□□□□ -0.67
PDZRN3-207ENST00000478209 PKD1P98161 4303 aa10.88□□□□□ -0.67
PDZRN3-207ENST00000478209 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
PDZRN3-207ENST00000478209 HLA-DQA1P01909 254 aa10.88□□□□□ -0.67
PDZRN3-207ENST00000478209 WFDC2Q14508 124 aa10.88□□□□□ -0.67
PDZRN3-207ENST00000478209 APOC3P02656 99 aa10.87□□□□□ -0.67
PDZRN3-207ENST00000478209 FUSP35637 526 aaKnown RBP eCLIP10.87□□□□□ -0.67
PDZRN3-207ENST00000478209 SMAGPQ0VAQ4 97 aa10.87□□□□□ -0.67
PDZRN3-207ENST00000478209 OR5A1Q8NGJ0 315 aa10.87□□□□□ -0.67
PDZRN3-207ENST00000478209 LAMTOR2Q9Y2Q5 125 aa10.87□□□□□ -0.67
PDZRN3-207ENST00000478209 PKHD1P08F94 4074 aa10.86□□□□□ -0.67
PDZRN3-207ENST00000478209 IGLV10-54A0A075B6I4 117 aa10.86□□□□□ -0.67
PDZRN3-207ENST00000478209 IGLV5-52A0A0A0MRZ9 124 aa10.86□□□□□ -0.67
PDZRN3-207ENST00000478209 TMEM18Q96B42 140 aa10.86□□□□□ -0.67
PDZRN3-207ENST00000478209 DNAH11Q96DT5 4516 aa10.86□□□□□ -0.67
PDZRN3-207ENST00000478209 IGKV3OR2-268A0A0C4DH90 116 aa10.85□□□□□ -0.67
PDZRN3-207ENST00000478209 C14orf177Q52M58 125 aa10.85□□□□□ -0.67
PDZRN3-207ENST00000478209 DGAT2L7PQ6IED9 249 aa10.85□□□□□ -0.67
PDZRN3-207ENST00000478209 MRPL52Q86TS9 123 aaKnown RBP10.85□□□□□ -0.67
PDZRN3-207ENST00000478209 SVBPQ8N300 66 aa10.85□□□□□ -0.67
PDZRN3-207ENST00000478209 SNAPINO95295 136 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms