RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MPV17L2Q567V2 206 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 TMEM97Q5BJF2 176 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 KCNIP4Q6PIL6 250 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 NFE4Q86UQ8 179 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 Q8N976 141 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 FRZBQ92765 325 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 MRAP2Q96G30 205 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 KRTAP4-12Q9BQ66 201 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 SDHAF1A6NFY7 115 aa6.89□□□□□ -1.31
HDAC6-222ENST00000478095 S100A8P05109 93 aa6.89□□□□□ -1.31
HDAC6-222ENST00000478095 AMTP48728 403 aa6.89□□□□□ -1.31
HDAC6-222ENST00000478095 IQCJQ1A5X6 159 aa6.89□□□□□ -1.31
HDAC6-222ENST00000478095 MRPL51Q4U2R6 128 aaKnown RBP6.89□□□□□ -1.31
HDAC6-222ENST00000478095 FAM104BQ5XKR9 115 aa6.89□□□□□ -1.31
HDAC6-222ENST00000478095 ST20Q9HBF5 79 aa6.89□□□□□ -1.31
HDAC6-222ENST00000478095 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
HDAC6-222ENST00000478095 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-222ENST00000478095 TRBV6-5A0A0K0K1A5 114 aa6.88□□□□□ -1.31
HDAC6-222ENST00000478095 ANGP03950 147 aaKnown RBP6.88□□□□□ -1.31
HDAC6-222ENST00000478095 LAGE3Q14657 143 aa6.88□□□□□ -1.31
HDAC6-222ENST00000478095 ATRAIDQ6UW56 229 aa6.88□□□□□ -1.31
HDAC6-222ENST00000478095 ATP5L2Q7Z4Y8 100 aa6.88□□□□□ -1.31
HDAC6-222ENST00000478095 UBE2WQ96B02 151 aa6.88□□□□□ -1.31
HDAC6-222ENST00000478095 TMEM243Q9BU79 118 aa6.88□□□□□ -1.31
HDAC6-222ENST00000478095 CHCHD7Q9BUK0 85 aa6.88□□□□□ -1.31
HDAC6-222ENST00000478095 D6R8Y8 96 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 PSCAO43653 123 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 PMCHP20382 165 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 CKS2P33552 79 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 RBX1P62877 108 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 C10orf91Q5T1B1 145 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 CLPSL2Q6UWE3 100 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 NRACQ8N912 160 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 TMEM70Q9BUB7 260 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 TMEM242Q9NWH2 141 aa6.87□□□□□ -1.31
HDAC6-222ENST00000478095 CARHSP1Q9Y2V2 147 aaKnown RBP6.87□□□□□ -1.31
HDAC6-222ENST00000478095 HECTD4Q9Y4D8 3996 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-222ENST00000478095 TRAV8-3A0A0A6YYJ7 113 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 IGKV2-29A2NJV5 120 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-222ENST00000478095 C7orf77A4D0Y5 90 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 I3L3M4 83 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 UBE2L6O14933 153 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 TSHBP01222 138 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 APCSP02743 223 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 PKIAP61925 76 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 ELOBQ15370 118 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 BTF3L4Q96K17 158 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 CTDSP1Q9GZU7 261 aa6.86□□□□□ -1.31
HDAC6-222ENST00000478095 IGLV4-60A0A075B6I1 120 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 IGKV2D-24A0A075B6R9 120 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 APOC3P02656 99 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 CRPP02741 224 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 FUSP35637 526 aaKnown RBP eCLIP6.85□□□□□ -1.31
HDAC6-222ENST00000478095 POLR2KP53803 58 aaKnown RBP6.85□□□□□ -1.31
HDAC6-222ENST00000478095 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 SUMO2P61956 95 aaKnown RBP6.85□□□□□ -1.31
HDAC6-222ENST00000478095 LCE3BQ5TA77 95 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 ENHOQ6UWT2 76 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 SPATA12Q7Z6I5 190 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 CLRN3Q8NCR9 226 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 RPS10P5Q9NQ39 176 aa6.85□□□□□ -1.31
HDAC6-222ENST00000478095 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 A0A087WTM6 91 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 TRBV27A0A0K0K1C4 114 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 TNFRSF6BO95407 300 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 PPP1R17O96001 155 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 NPYP01303 97 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 RHEBQ15382 184 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 LINC00269Q8N2A0 174 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 C20orf203Q8NBC4 194 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 IMMP2LQ96T52 175 aa6.84□□□□□ -1.31
HDAC6-222ENST00000478095 DYNC1H1Q14204 4646 aaKnown RBP6.83□□□□□ -1.32
HDAC6-222ENST00000478095 VCYO14598 125 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 LECT2O14960 151 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 S100PP25815 95 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 FCER1GP30273 86 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 WFDC2Q14508 124 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 NDUFA5Q16718 116 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 AMMECR1LQ6DCA0 310 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 RNASEKQ6P5S7 137 aaKnown RBP6.83□□□□□ -1.32
HDAC6-222ENST00000478095 TMEM136Q6ZRR5 245 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 ORMDL3Q8N138 153 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 RMI2Q96E14 147 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 TM2D2Q9BX73 214 aa6.83□□□□□ -1.32
HDAC6-222ENST00000478095 TRBV24-1A0A075B6N3 115 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 LRCOL1A6NCL2 159 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 PPBPP02775 128 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 FGF6P10767 208 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 Q0VG73 95 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 SLC7A5P1Q8MH63 180 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 MAPKAPK5-AS1Q8N8E1 139 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 PRELID3AQ96N28 172 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 C1orf43Q9BWL3 253 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 PRR34Q9NV39 138 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 PKD1P98161 4303 aa6.82□□□□□ -1.32
HDAC6-222ENST00000478095 PKHD1P08F94 4074 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms