RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 FRZBQ92765 325 aa15.03■□□□□ -0
TRAF4-211ENST00000478021 APOBP04114 4563 aaKnown RBP15.03■□□□□ -0
TRAF4-211ENST00000478021 NUP35Q8NFH5 326 aa15.02■□□□□ -0
TRAF4-211ENST00000478021 C1orf43Q9BWL3 253 aa15.02■□□□□ -0
TRAF4-211ENST00000478021 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.01□□□□□ -0.01
TRAF4-211ENST00000478021 GAS8-AS1O95177 125 aa15.01□□□□□ -0.01
TRAF4-211ENST00000478021 AMTP48728 403 aa15.01□□□□□ -0.01
TRAF4-211ENST00000478021 KRTAP4-5Q9BYR2 181 aa15.01□□□□□ -0.01
TRAF4-211ENST00000478021 LINC00269Q8N2A0 174 aa15□□□□□ -0.01
TRAF4-211ENST00000478021 TMEM191AQ9H0A3 160 aa15□□□□□ -0.01
TRAF4-211ENST00000478021 RIGQ13278 110 aa14.99□□□□□ -0.01
TRAF4-211ENST00000478021 AMN1Q8IY45 258 aa14.99□□□□□ -0.01
TRAF4-211ENST00000478021 RNF185Q96GF1 192 aa14.99□□□□□ -0.01
TRAF4-211ENST00000478021 NAT8BQ9UHF3 227 aa14.99□□□□□ -0.01
TRAF4-211ENST00000478021 SDHAF1A6NFY7 115 aa14.98□□□□□ -0.01
TRAF4-211ENST00000478021 UBE2L6O14933 153 aa14.98□□□□□ -0.01
TRAF4-211ENST00000478021 RAB14P61106 215 aa14.98□□□□□ -0.01
TRAF4-211ENST00000478021 C20orf203Q8NBC4 194 aa14.98□□□□□ -0.01
TRAF4-211ENST00000478021 PRR34Q9NV39 138 aa14.98□□□□□ -0.01
TRAF4-211ENST00000478021 IGLV4-60A0A075B6I1 120 aa14.97□□□□□ -0.01
TRAF4-211ENST00000478021 RAB4AP20338 218 aa14.97□□□□□ -0.01
TRAF4-211ENST00000478021 MIAQ16674 131 aa14.97□□□□□ -0.01
TRAF4-211ENST00000478021 SMIM27A0A1W2PRY6 76 aa14.96□□□□□ -0.01
TRAF4-211ENST00000478021 HLA-DQA1P01909 254 aa14.96□□□□□ -0.01
TRAF4-211ENST00000478021 XGP55808 180 aa14.96□□□□□ -0.01
TRAF4-211ENST00000478021 REG3AQ06141 175 aa14.95□□□□□ -0.02
TRAF4-211ENST00000478021 TRBV6-5A0A0K0K1A5 114 aa14.94□□□□□ -0.02
TRAF4-211ENST00000478021 A0A1B0GUV1 79 aa14.94□□□□□ -0.02
TRAF4-211ENST00000478021 SMKR1H3BMG3 65 aa14.94□□□□□ -0.02
TRAF4-211ENST00000478021 NCR2O95944 276 aa14.94□□□□□ -0.02
TRAF4-211ENST00000478021 PMCHP20382 165 aa14.94□□□□□ -0.02
TRAF4-211ENST00000478021 RPS10P46783 165 aaKnown RBP14.94□□□□□ -0.02
TRAF4-211ENST00000478021 HAMPP81172 84 aa14.94□□□□□ -0.02
TRAF4-211ENST00000478021 Q8N1X5 172 aa14.94□□□□□ -0.02
TRAF4-211ENST00000478021 ST20Q9HBF5 79 aa14.94□□□□□ -0.02
TRAF4-211ENST00000478021 IGLV10-54A0A075B6I4 117 aa14.93□□□□□ -0.02
TRAF4-211ENST00000478021 APCSP02743 223 aa14.93□□□□□ -0.02
TRAF4-211ENST00000478021 MRAP2Q96G30 205 aa14.93□□□□□ -0.02
TRAF4-211ENST00000478021 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-211ENST00000478021 IGKV2-29A2NJV5 120 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-211ENST00000478021 I3L3M4 83 aa14.92□□□□□ -0.02
TRAF4-211ENST00000478021 CAMPP49913 170 aa14.92□□□□□ -0.02
TRAF4-211ENST00000478021 LINC01620Q4KN68 170 aa14.91□□□□□ -0.02
TRAF4-211ENST00000478021 TMEM70Q9BUB7 260 aa14.91□□□□□ -0.02
TRAF4-211ENST00000478021 TMEM242Q9NWH2 141 aa14.91□□□□□ -0.02
TRAF4-211ENST00000478021 CLLU1Q5K131 121 aa14.9□□□□□ -0.02
TRAF4-211ENST00000478021 MRPL54Q6P161 138 aaKnown RBP14.9□□□□□ -0.02
TRAF4-211ENST00000478021 KRTAP26-1Q6PEX3 210 aa14.9□□□□□ -0.02
TRAF4-211ENST00000478021 USP17L23D6RBM5 183 aa14.89□□□□□ -0.03
TRAF4-211ENST00000478021 IFITM2Q01629 132 aa14.89□□□□□ -0.03
TRAF4-211ENST00000478021 AMMECR1LQ6DCA0 310 aa14.89□□□□□ -0.03
TRAF4-211ENST00000478021 FAM30AQ9NZY2 134 aa14.89□□□□□ -0.03
TRAF4-211ENST00000478021 TSHBP01222 138 aa14.88□□□□□ -0.03
TRAF4-211ENST00000478021 MRPL51Q4U2R6 128 aaKnown RBP14.88□□□□□ -0.03
TRAF4-211ENST00000478021 FAM104BQ5XKR9 115 aa14.88□□□□□ -0.03
TRAF4-211ENST00000478021 RNASEKQ6P5S7 137 aaKnown RBP14.88□□□□□ -0.03
TRAF4-211ENST00000478021 IGKV3OR2-268A0A0C4DH90 116 aa14.87□□□□□ -0.03
TRAF4-211ENST00000478021 POLR2KP53803 58 aaKnown RBP14.87□□□□□ -0.03
TRAF4-211ENST00000478021 C14orf177Q52M58 125 aa14.87□□□□□ -0.03
TRAF4-211ENST00000478021 FGF6P10767 208 aa14.86□□□□□ -0.03
TRAF4-211ENST00000478021 NRACQ8N912 160 aa14.86□□□□□ -0.03
TRAF4-211ENST00000478021 A0A1B0GW15 77 aa14.85□□□□□ -0.03
TRAF4-211ENST00000478021 H7C423 109 aa14.85□□□□□ -0.03
TRAF4-211ENST00000478021 HBBP68871 147 aa14.85□□□□□ -0.03
TRAF4-211ENST00000478021 TRAV8-4A0A0B4J246 113 aa14.84□□□□□ -0.03
TRAF4-211ENST00000478021 TRBV27A0A0K0K1C4 114 aa14.84□□□□□ -0.03
TRAF4-211ENST00000478021 PPP1R2P9O14990 202 aa14.84□□□□□ -0.03
TRAF4-211ENST00000478021 SMR3BP02814 79 aaPredicted RBP14.84□□□□□ -0.03
TRAF4-211ENST00000478021 ESDP10768 282 aa14.84□□□□□ -0.03
TRAF4-211ENST00000478021 A0A1B0GXF2 115 aa14.83□□□□□ -0.04
TRAF4-211ENST00000478021 PRSS1P07477 247 aa14.83□□□□□ -0.04
TRAF4-211ENST00000478021 PNRC1Q12796 327 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-211ENST00000478021 PPP1R17O96001 155 aa14.82□□□□□ -0.04
TRAF4-211ENST00000478021 SUMO2P61956 95 aaKnown RBP14.82□□□□□ -0.04
TRAF4-211ENST00000478021 S100A8P05109 93 aa14.81□□□□□ -0.04
TRAF4-211ENST00000478021 CKS2P33552 79 aa14.81□□□□□ -0.04
TRAF4-211ENST00000478021 EPM2AB3EWF7 344 aa14.8□□□□□ -0.04
TRAF4-211ENST00000478021 VCYO14598 125 aa14.8□□□□□ -0.04
TRAF4-211ENST00000478021 FCER1GP30273 86 aa14.8□□□□□ -0.04
TRAF4-211ENST00000478021 BTF3L4Q96K17 158 aa14.8□□□□□ -0.04
TRAF4-211ENST00000478021 C7orf77A4D0Y5 90 aa14.79□□□□□ -0.04
TRAF4-211ENST00000478021 LINC00862A6NCI5 91 aa14.79□□□□□ -0.04
TRAF4-211ENST00000478021 GAGE12HA6NDE8 117 aa14.79□□□□□ -0.04
TRAF4-211ENST00000478021 F8W036 122 aa14.79□□□□□ -0.04
TRAF4-211ENST00000478021 ZNF25P17030 456 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-211ENST00000478021 Q6ZSA8 131 aa14.79□□□□□ -0.04
TRAF4-211ENST00000478021 TMEM101Q96IK0 257 aa14.79□□□□□ -0.04
TRAF4-211ENST00000478021 D6R8Y8 96 aa14.78□□□□□ -0.04
TRAF4-211ENST00000478021 MT-ND4LP03901 98 aa14.78□□□□□ -0.04
TRAF4-211ENST00000478021 ANAPC16Q96DE5 110 aa14.78□□□□□ -0.04
TRAF4-211ENST00000478021 DNAH8Q96JB1 4490 aa14.77□□□□□ -0.04
TRAF4-211ENST00000478021 Q5VSD8 79 aa14.77□□□□□ -0.05
TRAF4-211ENST00000478021 ATP5L2Q7Z4Y8 100 aa14.77□□□□□ -0.05
TRAF4-211ENST00000478021 OR5A1Q8NGJ0 315 aa14.77□□□□□ -0.05
TRAF4-211ENST00000478021 KIR2DL4Q99706 377 aa14.77□□□□□ -0.05
TRAF4-211ENST00000478021 TNFRSF6BO95407 300 aa14.76□□□□□ -0.05
TRAF4-211ENST00000478021 ADCYAP1P18509 176 aa14.76□□□□□ -0.05
TRAF4-211ENST00000478021 CHCHD10Q8WYQ3 142 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-211ENST00000478021 hDV102S1A0JD36 115 aa14.75□□□□□ -0.05
TRAF4-211ENST00000478021 NPYP01303 97 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms