RNA–Protein interactions for RNA: ENST00000477905.1

LRRC42-205, Transcript of leucine rich repeat containing 42, humanhuman

TSL 2

Gene LRRC42, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-205ENST00000477905 CT83Q5H943 113 aa8.61□□□□□ -1.03
LRRC42-205ENST00000477905 LINC00269Q8N2A0 174 aa8.61□□□□□ -1.03
LRRC42-205ENST00000477905 RPP21Q9H633 154 aaKnown RBP8.61□□□□□ -1.03
LRRC42-205ENST00000477905 LRP1Q07954 4544 aaKnown RBP8.61□□□□□ -1.03
LRRC42-205ENST00000477905 BLOC1S1P78537 153 aa8.6□□□□□ -1.03
LRRC42-205ENST00000477905 REG3AQ06141 175 aa8.6□□□□□ -1.03
LRRC42-205ENST00000477905 GTSF1Q8WW33 167 aa8.6□□□□□ -1.03
LRRC42-205ENST00000477905 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
LRRC42-205ENST00000477905 FAT3Q8TDW7 4589 aa8.59□□□□□ -1.03
LRRC42-205ENST00000477905 IGLV4-60A0A075B6I1 120 aa8.59□□□□□ -1.03
LRRC42-205ENST00000477905 H7C423 109 aa8.59□□□□□ -1.03
LRRC42-205ENST00000477905 NCR2O95944 276 aa8.59□□□□□ -1.03
LRRC42-205ENST00000477905 NKX2-5P52952 324 aaPredicted RBP8.59□□□□□ -1.03
LRRC42-205ENST00000477905 GAGE6Q13070 117 aa8.59□□□□□ -1.03
LRRC42-205ENST00000477905 TEX261Q6UWH6 196 aa8.59□□□□□ -1.03
LRRC42-205ENST00000477905 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
LRRC42-205ENST00000477905 GATD1Q8NB37 220 aa8.59□□□□□ -1.03
LRRC42-205ENST00000477905 TRBV6-5A0A0K0K1A5 114 aa8.58□□□□□ -1.04
LRRC42-205ENST00000477905 FAM231BA6NCW3 169 aa8.58□□□□□ -1.04
LRRC42-205ENST00000477905 MGPP08493 103 aa8.58□□□□□ -1.04
LRRC42-205ENST00000477905 TPPP3Q9BW30 176 aa8.58□□□□□ -1.04
LRRC42-205ENST00000477905 SSTP61278 116 aa8.57□□□□□ -1.04
LRRC42-205ENST00000477905 GFRA4Q9GZZ7 299 aa8.57□□□□□ -1.04
LRRC42-205ENST00000477905 RNASE7Q9H1E1 156 aaKnown RBP8.57□□□□□ -1.04
LRRC42-205ENST00000477905 PKHD1L1Q86WI1 4243 aa8.56□□□□□ -1.04
LRRC42-205ENST00000477905 A8MWL6 223 aa8.56□□□□□ -1.04
LRRC42-205ENST00000477905 OXTP01178 125 aa8.56□□□□□ -1.04
LRRC42-205ENST00000477905 COTL1Q14019 142 aa8.56□□□□□ -1.04
LRRC42-205ENST00000477905 AKAP14Q86UN6 197 aa8.56□□□□□ -1.04
LRRC42-205ENST00000477905 HLA-DQA1P01909 254 aa8.55□□□□□ -1.04
LRRC42-205ENST00000477905 TWIST1Q15672 202 aa8.55□□□□□ -1.04
LRRC42-205ENST00000477905 SLPIP03973 132 aa8.54□□□□□ -1.04
LRRC42-205ENST00000477905 ALKAL2Q6UX46 152 aa8.54□□□□□ -1.04
LRRC42-205ENST00000477905 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
LRRC42-205ENST00000477905 ESDP10768 282 aa8.53□□□□□ -1.04
LRRC42-205ENST00000477905 ZNF25P17030 456 aaPredicted RBP8.53□□□□□ -1.04
LRRC42-205ENST00000477905 AMTP48728 403 aa8.53□□□□□ -1.04
LRRC42-205ENST00000477905 LINC01551Q86U37 167 aa8.53□□□□□ -1.04
LRRC42-205ENST00000477905 TMEM191AQ9H0A3 160 aa8.53□□□□□ -1.04
LRRC42-205ENST00000477905 OSTCQ9NRP0 149 aa8.53□□□□□ -1.04
LRRC42-205ENST00000477905 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
LRRC42-205ENST00000477905 SDHAF1A6NFY7 115 aa8.52□□□□□ -1.05
LRRC42-205ENST00000477905 PANO1I0J062 215 aa8.52□□□□□ -1.05
LRRC42-205ENST00000477905 GATCO43716 136 aaKnown RBP8.52□□□□□ -1.05
LRRC42-205ENST00000477905 POLR2KP53803 58 aaKnown RBP8.52□□□□□ -1.05
LRRC42-205ENST00000477905 CLPSL2Q6UWE3 100 aa8.52□□□□□ -1.05
LRRC42-205ENST00000477905 TSKUQ8WUA8 353 aa8.52□□□□□ -1.05
LRRC42-205ENST00000477905 TRAV26-2A0A0B4J265 109 aa8.51□□□□□ -1.05
LRRC42-205ENST00000477905 TRBV27A0A0K0K1C4 114 aa8.51□□□□□ -1.05
LRRC42-205ENST00000477905 SMIM15Q7Z3B0 74 aa8.51□□□□□ -1.05
LRRC42-205ENST00000477905 C15orf56Q8N910 161 aa8.51□□□□□ -1.05
LRRC42-205ENST00000477905 RPL39LQ96EH5 51 aaKnown RBP8.51□□□□□ -1.05
LRRC42-205ENST00000477905 IGLV10-54A0A075B6I4 117 aa8.5□□□□□ -1.05
LRRC42-205ENST00000477905 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.5□□□□□ -1.05
LRRC42-205ENST00000477905 UBE2L6O14933 153 aa8.5□□□□□ -1.05
LRRC42-205ENST00000477905 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
LRRC42-205ENST00000477905 MRPL52Q86TS9 123 aaKnown RBP8.5□□□□□ -1.05
LRRC42-205ENST00000477905 HMCN2Q8NDA2 5059 aa8.49□□□□□ -1.05
LRRC42-205ENST00000477905 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
LRRC42-205ENST00000477905 A0A1B0GUT8 65 aa8.49□□□□□ -1.05
LRRC42-205ENST00000477905 I3L3M4 83 aa8.49□□□□□ -1.05
LRRC42-205ENST00000477905 J3QL48 77 aa8.49□□□□□ -1.05
LRRC42-205ENST00000477905 SRP19P09132 144 aaKnown RBP8.49□□□□□ -1.05
LRRC42-205ENST00000477905 CFAP161Q6P656 301 aa8.49□□□□□ -1.05
LRRC42-205ENST00000477905 SMIM7Q9BQ49 75 aa8.49□□□□□ -1.05
LRRC42-205ENST00000477905 IGHV3-64A0A075B6Q5 118 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 HIGD1CA8MV81 97 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 APCSP02743 223 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 FGF6P10767 208 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 RAB4AP20338 218 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 OR5A1Q8NGJ0 315 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 SPACA4Q8TDM5 124 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 PLAC8Q9NZF1 115 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 CSDC2Q9Y534 153 aaKnown RBP8.48□□□□□ -1.05
LRRC42-205ENST00000477905 V9GYV3 84 aa8.48□□□□□ -1.05
LRRC42-205ENST00000477905 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
LRRC42-205ENST00000477905 TSHBP01222 138 aa8.47□□□□□ -1.05
LRRC42-205ENST00000477905 RPL37AP61513 92 aaKnown RBP8.47□□□□□ -1.05
LRRC42-205ENST00000477905 FAM74A3Q4VXF1 159 aa8.47□□□□□ -1.05
LRRC42-205ENST00000477905 CHCHD10Q8WYQ3 142 aaPredicted RBP8.47□□□□□ -1.05
LRRC42-205ENST00000477905 SMDT1Q9H4I9 107 aa8.47□□□□□ -1.05
LRRC42-205ENST00000477905 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
LRRC42-205ENST00000477905 GAS8-AS1O95177 125 aa8.46□□□□□ -1.06
LRRC42-205ENST00000477905 HNRNPA3P51991 378 aaKnown RBP8.46□□□□□ -1.06
LRRC42-205ENST00000477905 FOXI1Q12951 378 aa8.46□□□□□ -1.06
LRRC42-205ENST00000477905 SERTAD4-AS1Q5TG53 156 aa8.46□□□□□ -1.06
LRRC42-205ENST00000477905 EIF5A2Q9GZV4 153 aaKnown RBP8.46□□□□□ -1.06
LRRC42-205ENST00000477905 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
LRRC42-205ENST00000477905 ZNF727A8MUV8 499 aa8.45□□□□□ -1.06
LRRC42-205ENST00000477905 CCL25O15444 150 aa8.45□□□□□ -1.06
LRRC42-205ENST00000477905 PPP1R17O96001 155 aa8.45□□□□□ -1.06
LRRC42-205ENST00000477905 RPS10P46783 165 aaKnown RBP8.45□□□□□ -1.06
LRRC42-205ENST00000477905 RPL32P62910 135 aaKnown RBP8.45□□□□□ -1.06
LRRC42-205ENST00000477905 Q6ZRU5 148 aa8.45□□□□□ -1.06
LRRC42-205ENST00000477905 ISOC2Q96AB3 205 aa8.45□□□□□ -1.06
LRRC42-205ENST00000477905 ST20Q9HBF5 79 aa8.45□□□□□ -1.06
LRRC42-205ENST00000477905 CDC42SE2Q9NRR3 84 aa8.45□□□□□ -1.06
LRRC42-205ENST00000477905 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
LRRC42-205ENST00000477905 A0A087WYN8 130 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms