RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 MRPL51Q4U2R6 128 aaKnown RBP6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 Q6ZSA8 131 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 ORMDL3Q8N138 153 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 MRAP2Q96G30 205 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 RNF185Q96GF1 192 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 JPT2Q9H910 190 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 TRAV4A0A0B4J268 109 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 LRCOL1A6NCL2 159 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 F5H697 171 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 RS1O15537 224 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 PSCAO43653 123 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 RAB4AP20338 218 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 CKS2P33552 79 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 CFAP126Q5VTH2 177 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 Q8N814 137 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 OR4C5Q8NGB2 326 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 VSIG2Q96IQ7 327 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 SAMD10Q9BYL1 202 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 KIF25-AS1Q9Y6Z4 181 aa6.49□□□□□ -1.37
SMARCB1-206ENST00000477836 TRAV26-2A0A0B4J265 109 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 SMKR1H3BMG3 65 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST1H2BKO60814 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 IGHV3-53P01767 116 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST1H2BJP06899 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 CRYGDP07320 174 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 MT1HL1P0DM35 61 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST1H2BOP23527 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST1H2BBP33778 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST1H2BDP58876 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST1H2BCP62807 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST2H2BEQ16778 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 SUMO4Q6EEV6 95 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 ZFP2Q6ZN57 461 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 SCXQ7RTU7 201 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 LINC00612Q8N6U2 182 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST1H2BHQ93079 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 PRELID3AQ96N28 172 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST1H2BNQ99877 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 HIST1H2BMQ99879 126 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 ALKBH7Q9BT30 221 aaPredicted RBP6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 LAMTOR2Q9Y2Q5 125 aa6.48□□□□□ -1.37
SMARCB1-206ENST00000477836 IGHV3-73A0A0B4J1V6 119 aa6.47□□□□□ -1.37
SMARCB1-206ENST00000477836 H7C1H1 209 aa6.47□□□□□ -1.37
SMARCB1-206ENST00000477836 CIDEAO60543 219 aa6.47□□□□□ -1.37
SMARCB1-206ENST00000477836 GAS8-AS1O95177 125 aa6.47□□□□□ -1.37
SMARCB1-206ENST00000477836 OR10J3Q5JRS4 329 aa6.47□□□□□ -1.37
SMARCB1-206ENST00000477836 PPP1R17O96001 155 aa6.46□□□□□ -1.38
SMARCB1-206ENST00000477836 NPYP01303 97 aa6.46□□□□□ -1.38
SMARCB1-206ENST00000477836 S100A6P06703 90 aa6.46□□□□□ -1.38
SMARCB1-206ENST00000477836 UFSP1Q6NVU6 142 aa6.46□□□□□ -1.38
SMARCB1-206ENST00000477836 ZNF479Q96JC4 524 aa6.46□□□□□ -1.38
SMARCB1-206ENST00000477836 MAP1LC3AQ9H492 121 aa6.46□□□□□ -1.38
SMARCB1-206ENST00000477836 TRGV4A0A0C4DH28 118 aa6.45□□□□□ -1.38
SMARCB1-206ENST00000477836 TNFRSF6BO95407 300 aa6.45□□□□□ -1.38
SMARCB1-206ENST00000477836 GATA1P15976 413 aaPredicted RBP6.45□□□□□ -1.38
SMARCB1-206ENST00000477836 IQCJQ1A5X6 159 aa6.45□□□□□ -1.38
SMARCB1-206ENST00000477836 LYPD5Q6UWN5 251 aa6.45□□□□□ -1.38
SMARCB1-206ENST00000477836 BAGE3Q86Y29 109 aa6.45□□□□□ -1.38
SMARCB1-206ENST00000477836 NRACQ8N912 160 aa6.45□□□□□ -1.38
SMARCB1-206ENST00000477836 C18orf32Q8TCD1 76 aa6.45□□□□□ -1.38
SMARCB1-206ENST00000477836 RPL39LQ96EH5 51 aaKnown RBP6.45□□□□□ -1.38
SMARCB1-206ENST00000477836 K7EP13 123 aa6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 K7EQD1 137 aa6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 M0QY20 66 aa6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 PMCHP20382 165 aa6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 NDUFA6P56556 154 aa6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 Q0VG73 95 aa6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 RNASEKQ6P5S7 137 aaKnown RBP6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 WFDC10BQ8IUB3 73 aa6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 ICOSQ9Y6W8 199 aa6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 MUC2Q02817 5179 aa6.44□□□□□ -1.38
SMARCB1-206ENST00000477836 TRBV6-5A0A0K0K1A5 114 aa6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 LOC389332A0A1B0GUA5 103 aa6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 TRBV6-4A0A1B0GX49 114 aa6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 SUMO2P61956 95 aaKnown RBP6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 RHOHQ15669 191 aa6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 FA2HQ7L5A8 372 aa6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 C20orf78Q9BR46 151 aa6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 SMIM2Q9BVW6 85 aa6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 ST20Q9HBF5 79 aa6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 NXT2Q9NPJ8 142 aaKnown RBP6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 NIT2Q9NQR4 276 aa6.43□□□□□ -1.38
SMARCB1-206ENST00000477836 LPAP08519 4548 aa6.42□□□□□ -1.38
SMARCB1-206ENST00000477836 TRBV10-1A0A0K0K1A3 114 aa6.42□□□□□ -1.38
SMARCB1-206ENST00000477836 PAX4O43316 350 aa6.42□□□□□ -1.38
SMARCB1-206ENST00000477836 SERF1AO75920 110 aa6.42□□□□□ -1.38
SMARCB1-206ENST00000477836 COA6Q5JTJ3 125 aaKnown RBP6.42□□□□□ -1.38
SMARCB1-206ENST00000477836 SLC25A29Q8N8R3 303 aa6.42□□□□□ -1.38
SMARCB1-206ENST00000477836 PRSS3P2Q8NHM4 247 aa6.42□□□□□ -1.38
SMARCB1-206ENST00000477836 PRADC1Q9BSG0 188 aa6.42□□□□□ -1.38
SMARCB1-206ENST00000477836 CHAC1Q9BUX1 264 aa6.42□□□□□ -1.38
SMARCB1-206ENST00000477836 HSBP1O75506 76 aa6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 RPL37AP61513 92 aaKnown RBP6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 RPL36AP83881 106 aaKnown RBP6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 FHL2Q14192 279 aa6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 LINC01620Q4KN68 170 aa6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 C10orf126Q8N4M7 172 aa6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 NEXN-AS1Q8NBZ9 246 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms