RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 VSIG2Q96IQ7 327 aa9.43□□□□□ -0.9
RTFDC1-207ENST00000477573 ZFYVE26Q68DK2 2539 aa9.43□□□□□ -0.9
RTFDC1-207ENST00000477573 SUMO2P61956 95 aaKnown RBP9.43□□□□□ -0.9
RTFDC1-207ENST00000477573 IGHV4-4A0A075B6R2 117 aa9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 IGHV3OR16-10A0A075B7F0 116 aa9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 TEX22C9J3V5 150 aa9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 IGHV3-48P01763 117 aa9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 LYZP61626 148 aa9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 DAZ2Q13117 558 aaKnown RBP9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 FAM223AQ8IWN6 122 aa9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 TMEM141Q96I45 108 aa9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 DAZ1Q9NQZ3 744 aaKnown RBP9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 COL12A1Q99715 3063 aa9.42□□□□□ -0.9
RTFDC1-207ENST00000477573 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 PRB1P04280 392 aa9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 RBMY1A1P0DJD3 496 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 RBMY1CP0DJD4 496 aa9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 RBMY1FQ15415 496 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 ZNF843Q8N446 348 aa9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 RETNQ9HD89 108 aa9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 PRRC2AP48634 2157 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 H3BRN7 92 aa9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 ATP5EP56381 51 aaPredicted RBP9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 BBC3Q96PG8 261 aaPredicted RBP9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 ZNF462Q96JM2 2506 aa9.41□□□□□ -0.9
RTFDC1-207ENST00000477573 FAM223BA6NKX1 122 aa9.4□□□□□ -0.9
RTFDC1-207ENST00000477573 H7BZZ5 65 aa9.4□□□□□ -0.9
RTFDC1-207ENST00000477573 MED13LQ71F56 2210 aa9.4□□□□□ -0.9
RTFDC1-207ENST00000477573 NACAE9PAV3 2078 aa9.4□□□□□ -0.91
RTFDC1-207ENST00000477573 TRGV3P03979 118 aa9.4□□□□□ -0.91
RTFDC1-207ENST00000477573 APELAP0DMC3 54 aa9.4□□□□□ -0.91
RTFDC1-207ENST00000477573 XCL1P47992 114 aa9.4□□□□□ -0.91
RTFDC1-207ENST00000477573 ZNF80P51504 273 aaPredicted RBP9.4□□□□□ -0.91
RTFDC1-207ENST00000477573 Q6ZRU5 148 aa9.4□□□□□ -0.91
RTFDC1-207ENST00000477573 PRR15Q8IV56 129 aa9.4□□□□□ -0.91
RTFDC1-207ENST00000477573 XCL2Q9UBD3 114 aa9.4□□□□□ -0.91
RTFDC1-207ENST00000477573 UBE2D4Q9Y2X8 147 aa9.4□□□□□ -0.91
RTFDC1-207ENST00000477573 BCE1O60756 84 aa9.39□□□□□ -0.91
RTFDC1-207ENST00000477573 DSCR9P59020 149 aa9.39□□□□□ -0.91
RTFDC1-207ENST00000477573 CFHR3Q02985 330 aa9.39□□□□□ -0.91
RTFDC1-207ENST00000477573 PPP1R17O96001 155 aa9.39□□□□□ -0.91
RTFDC1-207ENST00000477573 ZNF876PQ49A33 203 aa9.39□□□□□ -0.91
RTFDC1-207ENST00000477573 Q8N6K4 173 aa9.39□□□□□ -0.91
RTFDC1-207ENST00000477573 FANCD2OSQ96PS1 177 aa9.39□□□□□ -0.91
RTFDC1-207ENST00000477573 TIMM17AQ99595 171 aa9.39□□□□□ -0.91
RTFDC1-207ENST00000477573 TRAV26-2A0A0B4J265 109 aa9.38□□□□□ -0.91
RTFDC1-207ENST00000477573 M0R381 172 aa9.38□□□□□ -0.91
RTFDC1-207ENST00000477573 SAA4P35542 130 aa9.38□□□□□ -0.91
RTFDC1-207ENST00000477573 EPG5Q9HCE0 2579 aa9.38□□□□□ -0.91
RTFDC1-207ENST00000477573 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
RTFDC1-207ENST00000477573 IGIPA6NJ69 53 aa9.37□□□□□ -0.91
RTFDC1-207ENST00000477573 TMEM61Q8N0U2 210 aa9.37□□□□□ -0.91
RTFDC1-207ENST00000477573 IGHV4-61A0A0C4DH41 118 aa9.37□□□□□ -0.91
RTFDC1-207ENST00000477573 COX7A2LO14548 114 aa9.37□□□□□ -0.91
RTFDC1-207ENST00000477573 Q96MF0 132 aa9.37□□□□□ -0.91
RTFDC1-207ENST00000477573 SPG11Q96JI7 2443 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 A8MZ25 164 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 GHRHP01286 108 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 LITAFQ99732 161 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 ASH1LQ9NR48 2969 aaKnown RBP9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 FAM208BQ5VWN6 2430 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 I3L2K1 104 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 DNAL4O96015 105 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 TSHBP01222 138 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 KLKP1Q107X0 134 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
RTFDC1-207ENST00000477573 LRRK2Q5S007 2527 aa9.35□□□□□ -0.91
RTFDC1-207ENST00000477573 RUSC1-AS1Q66K80 236 aa9.35□□□□□ -0.91
RTFDC1-207ENST00000477573 UBR5O95071 2799 aaPredicted RBP9.35□□□□□ -0.91
RTFDC1-207ENST00000477573 IGHV4-30-2A0A087WSY4 118 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 A0A087WVE0 104 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 IGHV3-21A0A0B4J1V1 117 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 IGKV3D-7A0A0C4DH55 119 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 CCKP06307 115 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 BAALC-AS2P0C853 105 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 BEAN1Q3B7T3 259 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 ATP5EP2Q5VTU8 51 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 LYPD5Q6UWN5 251 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 IGKV2-40A0A087WW87 121 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 TRBV7-6A0A0J9YX20 115 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 IGKV2D-40P01614 121 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 MIAQ16674 131 aa9.34□□□□□ -0.91
RTFDC1-207ENST00000477573 IGHV1-69P01742 117 aa9.33□□□□□ -0.92
RTFDC1-207ENST00000477573 Q8N9W7 124 aa9.33□□□□□ -0.92
RTFDC1-207ENST00000477573 ABCA1O95477 2261 aa9.33□□□□□ -0.92
RTFDC1-207ENST00000477573 B4DSR2 109 aa9.33□□□□□ -0.92
RTFDC1-207ENST00000477573 K7EIM0 57 aa9.33□□□□□ -0.92
RTFDC1-207ENST00000477573 NDUFC1O43677 76 aa9.33□□□□□ -0.92
RTFDC1-207ENST00000477573 TIMM17BO60830 172 aa9.33□□□□□ -0.92
RTFDC1-207ENST00000477573 MSMBP08118 114 aa9.33□□□□□ -0.92
RTFDC1-207ENST00000477573 IGHV7-4-1A0A0J9YVY3 117 aa9.32□□□□□ -0.92
RTFDC1-207ENST00000477573 PLAC8L1A1L4L8 177 aa9.32□□□□□ -0.92
RTFDC1-207ENST00000477573 S100A7L2Q5SY68 101 aa9.32□□□□□ -0.92
RTFDC1-207ENST00000477573 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
RTFDC1-207ENST00000477573 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
RTFDC1-207ENST00000477573 IGLV11-55A0A075B6I3 123 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms