RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 CFC1P0CG37 223 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 SCGB1C2P0DMR2 95 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 IGHV3-30-3P0DP02 117 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 KHDC1LQ5JSQ8 128 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 SFTA2Q6UW10 78 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 C10orf99Q6UWK7 81 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 SBSPONQ8IVN8 264 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 C11orf72Q8NBR9 251 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 TMEM263Q8WUH6 116 aaKnown RBP6.11□□□□□ -1.43
PTPRD-209ENST00000477552 PPDPFLQ8WWR9 84 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 SPATA25Q9BR10 227 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 NAA38Q9BRA0 125 aaKnown RBP6.11□□□□□ -1.43
PTPRD-209ENST00000477552 GTSF1LQ9H1H1 148 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 PRO0461Q9UI25 63 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 A0A0J9YXV3 536 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 TRBV30A0A0K0K1B3 111 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 CCL24O00175 119 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 SPRY2O43597 315 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 SAP30O75446 220 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 EDN2P20800 178 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 HERV-K104P63124 156 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 ATXN8Q156A1 80 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 ZFAND6Q6FIF0 208 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 TEN1Q86WV5 123 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 C16orf74Q96GX8 76 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 VSIG2Q96IQ7 327 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 UBE2D4Q9Y2X8 147 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 CELSR2Q9HCU4 2923 aa6.1□□□□□ -1.43
PTPRD-209ENST00000477552 USP9YO00507 2555 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-209ENST00000477552 GAGE12HA6NDE8 117 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 NDUFA1O15239 70 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 PSMB2P49721 201 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 WFDC2Q14508 124 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 MIAQ16674 131 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 ETDBQ3ZM63 59 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 Q6ZSV7 163 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 IL17DQ8TAD2 202 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 NRGNQ92686 78 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 CHCHD7Q9BUK0 85 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 NDUFA12Q9UI09 145 aa6.09□□□□□ -1.43
PTPRD-209ENST00000477552 MAP1AP78559 2803 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-209ENST00000477552 A4D1N5 150 aa6.08□□□□□ -1.44
PTPRD-209ENST00000477552 DNAJC9-AS1A6NH13 148 aa6.08□□□□□ -1.44
PTPRD-209ENST00000477552 K7EQD1 137 aa6.08□□□□□ -1.44
PTPRD-209ENST00000477552 IGHV3-33P01772 117 aa6.08□□□□□ -1.44
PTPRD-209ENST00000477552 RNASE1P07998 156 aaKnown RBP6.08□□□□□ -1.44
PTPRD-209ENST00000477552 AZU1P20160 251 aa6.08□□□□□ -1.44
PTPRD-209ENST00000477552 FOXI1Q12951 378 aa6.08□□□□□ -1.44
PTPRD-209ENST00000477552 OXLD1Q5BKU9 147 aa6.08□□□□□ -1.44
PTPRD-209ENST00000477552 ZNF418Q8TF45 676 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-209ENST00000477552 TMEM101Q96IK0 257 aa6.08□□□□□ -1.44
PTPRD-209ENST00000477552 MXRA5Q9NR99 2828 aa6.08□□□□□ -1.44
PTPRD-209ENST00000477552 NACAE9PAV3 2078 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 RBMY1BA6NDE4 496 aaKnown RBP6.07□□□□□ -1.44
PTPRD-209ENST00000477552 RBMY1EA6NEQ0 496 aaKnown RBP6.07□□□□□ -1.44
PTPRD-209ENST00000477552 NDUFA7O95182 113 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 RBMY1DP0C7P1 496 aaKnown RBP6.07□□□□□ -1.44
PTPRD-209ENST00000477552 RBMY1A1P0DJD3 496 aaKnown RBP6.07□□□□□ -1.44
PTPRD-209ENST00000477552 RBMY1CP0DJD4 496 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 HTN1P15515 57 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 EMP1P54849 157 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 TSPEAR-AS2P59090 65 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 RBMY1FQ15415 496 aaKnown RBP6.07□□□□□ -1.44
PTPRD-209ENST00000477552 LRRK2Q5S007 2527 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 NAV2Q8IVL1 2488 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 COL12A1Q99715 3063 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 CELSR1Q9NYQ6 3014 aa6.07□□□□□ -1.44
PTPRD-209ENST00000477552 TRBV6-4A0A1B0GX49 114 aa6.06□□□□□ -1.44
PTPRD-209ENST00000477552 PF4P02776 101 aa6.06□□□□□ -1.44
PTPRD-209ENST00000477552 Q1RN00 199 aa6.06□□□□□ -1.44
PTPRD-209ENST00000477552 DEFB136Q30KP8 78 aa6.06□□□□□ -1.44
PTPRD-209ENST00000477552 ODF3L2Q3SX64 289 aa6.06□□□□□ -1.44
PTPRD-209ENST00000477552 MUSTN1Q8IVN3 82 aa6.06□□□□□ -1.44
PTPRD-209ENST00000477552 FAM208BQ5VWN6 2430 aa6.06□□□□□ -1.44
PTPRD-209ENST00000477552 MYO9AB2RTY4 2548 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 TEX15Q9BXT5 2789 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 TRAV26-1A0A087WT03 109 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 TRGV1A0A0A0MS02 117 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 IGLV5-39A0A0G2JS06 123 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 H3BT86 120 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 UBE2L6O14933 153 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 PRSS2P07478 247 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 MAPK1IP1LQ8NDC0 245 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 OVOL2Q9BRP0 275 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 TMEM243Q9BU79 118 aa6.05□□□□□ -1.44
PTPRD-209ENST00000477552 ZNF462Q96JM2 2506 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 RELNP78509 3460 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 A0A1B0GV72 72 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 SMIM9A6NGZ8 99 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 SLC25A20O43772 301 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 TCL1BO95988 128 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 IGLV1-51P01701 117 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 INSL3P51460 131 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 C1orf158Q8N1D5 194 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 CARD19Q96LW7 228 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 OPRPNQ99935 248 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-209ENST00000477552 XCL2Q9UBD3 114 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 SORL1Q92673 2214 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 CRYBG3Q68DQ2 2970 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms