RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 CHAC1Q9BUX1 264 aa10.26□□□□□ -0.77
CLDN11-204ENST00000477531 SMDT1Q9H4I9 107 aa10.26□□□□□ -0.77
CLDN11-204ENST00000477531 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
CLDN11-204ENST00000477531 CNFNQ9BYD5 112 aa10.25□□□□□ -0.77
CLDN11-204ENST00000477531 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
CLDN11-204ENST00000477531 A0A1B0GUV1 79 aa10.24□□□□□ -0.77
CLDN11-204ENST00000477531 K7EN84 100 aa10.24□□□□□ -0.77
CLDN11-204ENST00000477531 GATCO43716 136 aaKnown RBP10.24□□□□□ -0.77
CLDN11-204ENST00000477531 AMTP48728 403 aa10.24□□□□□ -0.77
CLDN11-204ENST00000477531 REG3AQ06141 175 aa10.24□□□□□ -0.77
CLDN11-204ENST00000477531 PEA15Q15121 130 aa10.24□□□□□ -0.77
CLDN11-204ENST00000477531 DGAT2L7PQ6IED9 249 aa10.24□□□□□ -0.77
CLDN11-204ENST00000477531 MYCBP2O75592 4640 aa10.24□□□□□ -0.77
CLDN11-204ENST00000477531 CEBPGP53567 150 aa10.23□□□□□ -0.77
CLDN11-204ENST00000477531 HERC1Q15751 4861 aa10.22□□□□□ -0.77
CLDN11-204ENST00000477531 IGLV10-54A0A075B6I4 117 aa10.22□□□□□ -0.77
CLDN11-204ENST00000477531 A8MWL6 223 aa10.22□□□□□ -0.77
CLDN11-204ENST00000477531 PRSS1P07477 247 aa10.22□□□□□ -0.77
CLDN11-204ENST00000477531 C20orf203Q8NBC4 194 aa10.22□□□□□ -0.77
CLDN11-204ENST00000477531 CLRN3Q8NCR9 226 aa10.22□□□□□ -0.77
CLDN11-204ENST00000477531 J3QL48 77 aa10.21□□□□□ -0.77
CLDN11-204ENST00000477531 SRP19P09132 144 aaKnown RBP10.21□□□□□ -0.77
CLDN11-204ENST00000477531 GATD1Q8NB37 220 aa10.21□□□□□ -0.77
CLDN11-204ENST00000477531 CIRBP-AS1Q8TBR5 109 aa10.21□□□□□ -0.77
CLDN11-204ENST00000477531 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.77
CLDN11-204ENST00000477531 BORCS7Q96B45 105 aa10.21□□□□□ -0.77
CLDN11-204ENST00000477531 IGLV4-60A0A075B6I1 120 aa10.2□□□□□ -0.78
CLDN11-204ENST00000477531 KRTAP26-1Q6PEX3 210 aa10.2□□□□□ -0.78
CLDN11-204ENST00000477531 FAM231DQ6ZW35 169 aa10.2□□□□□ -0.78
CLDN11-204ENST00000477531 GTSF1Q8WW33 167 aa10.2□□□□□ -0.78
CLDN11-204ENST00000477531 TRAV26-2A0A0B4J265 109 aa10.19□□□□□ -0.78
CLDN11-204ENST00000477531 NCR2O95944 276 aa10.19□□□□□ -0.78
CLDN11-204ENST00000477531 C9orf163Q8N9P6 203 aa10.19□□□□□ -0.78
CLDN11-204ENST00000477531 AP5S1Q9NUS5 200 aa10.19□□□□□ -0.78
CLDN11-204ENST00000477531 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
CLDN11-204ENST00000477531 FAM74A3Q4VXF1 159 aa10.18□□□□□ -0.78
CLDN11-204ENST00000477531 CT83Q5H943 113 aa10.18□□□□□ -0.78
CLDN11-204ENST00000477531 AMMECR1LQ6DCA0 310 aa10.18□□□□□ -0.78
CLDN11-204ENST00000477531 SMIM7Q9BQ49 75 aa10.18□□□□□ -0.78
CLDN11-204ENST00000477531 ZNF727A8MUV8 499 aa10.17□□□□□ -0.78
CLDN11-204ENST00000477531 UQCC3Q6UW78 93 aa10.17□□□□□ -0.78
CLDN11-204ENST00000477531 RPL39LQ96EH5 51 aaKnown RBP10.17□□□□□ -0.78
CLDN11-204ENST00000477531 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
CLDN11-204ENST00000477531 LINC00862A6NCI5 91 aa10.16□□□□□ -0.78
CLDN11-204ENST00000477531 APCSP02743 223 aa10.16□□□□□ -0.78
CLDN11-204ENST00000477531 FOXA3P55318 350 aaPredicted RBP10.16□□□□□ -0.78
CLDN11-204ENST00000477531 SRSF3P84103 164 aaKnown RBP10.16□□□□□ -0.78
CLDN11-204ENST00000477531 RNASEKQ6P5S7 137 aaKnown RBP10.16□□□□□ -0.78
CLDN11-204ENST00000477531 CFAP161Q6P656 301 aa10.16□□□□□ -0.78
CLDN11-204ENST00000477531 GFRA4Q9GZZ7 299 aa10.16□□□□□ -0.78
CLDN11-204ENST00000477531 IGKV3OR2-268A0A0C4DH90 116 aa10.15□□□□□ -0.78
CLDN11-204ENST00000477531 SDHAF1A6NFY7 115 aa10.15□□□□□ -0.78
CLDN11-204ENST00000477531 H7C423 109 aa10.15□□□□□ -0.78
CLDN11-204ENST00000477531 PMCHP20382 165 aa10.15□□□□□ -0.78
CLDN11-204ENST00000477531 COMMD7Q86VX2 200 aa10.15□□□□□ -0.78
CLDN11-204ENST00000477531 A0A1B0GUT8 65 aa10.14□□□□□ -0.79
CLDN11-204ENST00000477531 C9JQL5 133 aa10.14□□□□□ -0.79
CLDN11-204ENST00000477531 I3L3M4 83 aa10.14□□□□□ -0.79
CLDN11-204ENST00000477531 CNBPP62633 177 aaKnown RBP10.14□□□□□ -0.79
CLDN11-204ENST00000477531 LINC01551Q86U37 167 aa10.14□□□□□ -0.79
CLDN11-204ENST00000477531 TSKUQ8WUA8 353 aa10.14□□□□□ -0.79
CLDN11-204ENST00000477531 FAM231BA6NCW3 169 aa10.13□□□□□ -0.79
CLDN11-204ENST00000477531 HIGD1CA8MV81 97 aa10.13□□□□□ -0.79
CLDN11-204ENST00000477531 DPH3Q96FX2 82 aa10.13□□□□□ -0.79
CLDN11-204ENST00000477531 BTF3L4Q96K17 158 aa10.13□□□□□ -0.79
CLDN11-204ENST00000477531 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
CLDN11-204ENST00000477531 OSTCQ9NRP0 149 aa10.13□□□□□ -0.79
CLDN11-204ENST00000477531 NAT8Q9UHE5 227 aa10.13□□□□□ -0.79
CLDN11-204ENST00000477531 IGHV3-64A0A075B6Q5 118 aa10.12□□□□□ -0.79
CLDN11-204ENST00000477531 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.12□□□□□ -0.79
CLDN11-204ENST00000477531 IGKV2-29A2NJV5 120 aaPredicted RBP10.12□□□□□ -0.79
CLDN11-204ENST00000477531 GAGE12HA6NDE8 117 aa10.12□□□□□ -0.79
CLDN11-204ENST00000477531 RPL37AP61513 92 aaKnown RBP10.12□□□□□ -0.79
CLDN11-204ENST00000477531 TMEM241Q24JQ0 296 aa10.12□□□□□ -0.79
CLDN11-204ENST00000477531 TMEM101Q96IK0 257 aa10.12□□□□□ -0.79
CLDN11-204ENST00000477531 TMEM191AQ9H0A3 160 aa10.12□□□□□ -0.79
CLDN11-204ENST00000477531 TRBV6-5A0A0K0K1A5 114 aa10.11□□□□□ -0.79
CLDN11-204ENST00000477531 KRTAP29-1A8MX34 341 aaPredicted RBP10.11□□□□□ -0.79
CLDN11-204ENST00000477531 FGF6P10767 208 aa10.11□□□□□ -0.79
CLDN11-204ENST00000477531 ZNF25P17030 456 aaPredicted RBP10.11□□□□□ -0.79
CLDN11-204ENST00000477531 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
CLDN11-204ENST00000477531 RIGQ13278 110 aa10.1□□□□□ -0.79
CLDN11-204ENST00000477531 CHCHD10Q8WYQ3 142 aaPredicted RBP10.1□□□□□ -0.79
CLDN11-204ENST00000477531 MRAP2Q96G30 205 aa10.1□□□□□ -0.79
CLDN11-204ENST00000477531 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
CLDN11-204ENST00000477531 RPL23P62829 140 aaKnown RBP10.08□□□□□ -0.8
CLDN11-204ENST00000477531 PNRC1Q12796 327 aaPredicted RBP10.08□□□□□ -0.8
CLDN11-204ENST00000477531 ADIRFQ15847 76 aa10.08□□□□□ -0.8
CLDN11-204ENST00000477531 OR5A1Q8NGJ0 315 aa10.08□□□□□ -0.8
CLDN11-204ENST00000477531 TMEM218A2RU14 115 aa10.07□□□□□ -0.8
CLDN11-204ENST00000477531 PPP1R17O96001 155 aa10.07□□□□□ -0.8
CLDN11-204ENST00000477531 RAB4AP20338 218 aa10.07□□□□□ -0.8
CLDN11-204ENST00000477531 RPS10P46783 165 aaKnown RBP10.07□□□□□ -0.8
CLDN11-204ENST00000477531 KRTAP10-4P60372 401 aaPredicted RBP10.07□□□□□ -0.8
CLDN11-204ENST00000477531 RNF185Q96GF1 192 aa10.07□□□□□ -0.8
CLDN11-204ENST00000477531 TMEM242Q9NWH2 141 aa10.07□□□□□ -0.8
CLDN11-204ENST00000477531 V9GYV3 84 aa10.07□□□□□ -0.8
CLDN11-204ENST00000477531 F8W036 122 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 OXTP01178 125 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 TSHBP01222 138 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms