RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 POLR2KP53803 58 aaKnown RBP10.87□□□□□ -0.67
HDAC6-220ENST00000477528 CEMP1Q6PRD7 247 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-220ENST00000477528 SORL1Q92673 2214 aa10.86□□□□□ -0.67
HDAC6-220ENST00000477528 CARD19Q96LW7 228 aa10.86□□□□□ -0.67
HDAC6-220ENST00000477528 SOCS3O14543 225 aa10.85□□□□□ -0.67
HDAC6-220ENST00000477528 CRYBA4P53673 196 aa10.85□□□□□ -0.67
HDAC6-220ENST00000477528 ATP6V0E2Q8NHE4 81 aa10.85□□□□□ -0.67
HDAC6-220ENST00000477528 A0A096LNJ9 63 aa10.85□□□□□ -0.67
HDAC6-220ENST00000477528 Q6ZUT4 128 aa10.85□□□□□ -0.67
HDAC6-220ENST00000477528 C3orf56Q8N813 242 aa10.85□□□□□ -0.67
HDAC6-220ENST00000477528 IGLV4-3A0A075B6K6 122 aa10.85□□□□□ -0.67
HDAC6-220ENST00000477528 GYPEP15421 78 aa10.85□□□□□ -0.67
HDAC6-220ENST00000477528 NDUFA11Q86Y39 141 aa10.85□□□□□ -0.67
HDAC6-220ENST00000477528 TINCRA0A1B0GVN0 87 aa10.84□□□□□ -0.67
HDAC6-220ENST00000477528 ANGP03950 147 aaKnown RBP10.84□□□□□ -0.67
HDAC6-220ENST00000477528 NTN5Q8WTR8 489 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-220ENST00000477528 ZMAT4Q9H898 229 aa10.84□□□□□ -0.67
HDAC6-220ENST00000477528 CRYGDP07320 174 aa10.84□□□□□ -0.67
HDAC6-220ENST00000477528 INAFM2P0DMQ5 153 aa10.84□□□□□ -0.67
HDAC6-220ENST00000477528 CFAP126Q5VTH2 177 aa10.84□□□□□ -0.67
HDAC6-220ENST00000477528 EDN2P20800 178 aa10.83□□□□□ -0.68
HDAC6-220ENST00000477528 XCL1P47992 114 aa10.83□□□□□ -0.68
HDAC6-220ENST00000477528 ZNF22P17026 224 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-220ENST00000477528 Q6ZTI0 123 aa10.83□□□□□ -0.68
HDAC6-220ENST00000477528 C5orf38Q86SI9 138 aa10.83□□□□□ -0.68
HDAC6-220ENST00000477528 A0A0J9YY99 117 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 TMEM223A0PJW6 202 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 CLPSL2Q6UWE3 100 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 HHLA3Q9XRX5 114 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 ICOSQ9Y6W8 199 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 C18orf65Q6ZTR6 163 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 NXPH4O95158 308 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 UNC80Q8N2C7 3258 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 TEN1Q86WV5 123 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 ANKRD29Q8N6D5 301 aa10.82□□□□□ -0.68
HDAC6-220ENST00000477528 TSHBP01222 138 aa10.81□□□□□ -0.68
HDAC6-220ENST00000477528 LINC00467Q9BRT7 94 aa10.81□□□□□ -0.68
HDAC6-220ENST00000477528 A0A0J9YXY3 114 aa10.81□□□□□ -0.68
HDAC6-220ENST00000477528 SPANXB1Q9NS25 103 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-220ENST00000477528 PYGO1Q9Y3Y4 419 aa10.81□□□□□ -0.68
HDAC6-220ENST00000477528 COX7B2Q8TF08 81 aa10.81□□□□□ -0.68
HDAC6-220ENST00000477528 CRLF1O75462 422 aa10.81□□□□□ -0.68
HDAC6-220ENST00000477528 GAGE2AQ6NT46 116 aa10.81□□□□□ -0.68
HDAC6-220ENST00000477528 DSCAML1Q8TD84 2053 aa10.8□□□□□ -0.68
HDAC6-220ENST00000477528 G3V4G9 280 aa10.8□□□□□ -0.68
HDAC6-220ENST00000477528 RS1O15537 224 aa10.8□□□□□ -0.68
HDAC6-220ENST00000477528 DAND5Q8N907 189 aa10.8□□□□□ -0.68
HDAC6-220ENST00000477528 PROK1P58294 105 aa10.8□□□□□ -0.68
HDAC6-220ENST00000477528 LINC01620Q4KN68 170 aa10.8□□□□□ -0.68
HDAC6-220ENST00000477528 MYO18BQ8IUG5 2567 aa10.8□□□□□ -0.68
HDAC6-220ENST00000477528 A0A0C4DFX4 3053 aa10.8□□□□□ -0.68
HDAC6-220ENST00000477528 INSL3P51460 131 aa10.79□□□□□ -0.68
HDAC6-220ENST00000477528 USP9YO00507 2555 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-220ENST00000477528 USP9XQ93008 2570 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-220ENST00000477528 NFE4Q86UQ8 179 aa10.79□□□□□ -0.68
HDAC6-220ENST00000477528 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
HDAC6-220ENST00000477528 ATP5G1P05496 136 aa10.78□□□□□ -0.68
HDAC6-220ENST00000477528 IGLV2-18A0A075B6J9 118 aa10.78□□□□□ -0.68
HDAC6-220ENST00000477528 MIAQ16674 131 aa10.78□□□□□ -0.68
HDAC6-220ENST00000477528 A0A0B4J2C4 111 aa10.78□□□□□ -0.68
HDAC6-220ENST00000477528 SONP18583 2426 aaKnown RBP10.78□□□□□ -0.68
HDAC6-220ENST00000477528 KRTAP10-9P60411 292 aa10.77□□□□□ -0.68
HDAC6-220ENST00000477528 PIK3CD-AS1Q5SR53 167 aa10.77□□□□□ -0.68
HDAC6-220ENST00000477528 LAMTOR3Q9UHA4 124 aa10.77□□□□□ -0.68
HDAC6-220ENST00000477528 SPART-AS1P0CW21 52 aa10.77□□□□□ -0.69
HDAC6-220ENST00000477528 SND1-IT1Q9HBX3 110 aa10.77□□□□□ -0.69
HDAC6-220ENST00000477528 IGIPA6NJ69 53 aa10.77□□□□□ -0.69
HDAC6-220ENST00000477528 FOXI1Q12951 378 aa10.77□□□□□ -0.69
HDAC6-220ENST00000477528 MRPL23Q16540 153 aaKnown RBP10.77□□□□□ -0.69
HDAC6-220ENST00000477528 CDKN2A-AS1Q9UH64 79 aa10.76□□□□□ -0.69
HDAC6-220ENST00000477528 CDH23Q9H251 3354 aa10.76□□□□□ -0.69
HDAC6-220ENST00000477528 C2CD3Q4AC94 2353 aa10.76□□□□□ -0.69
HDAC6-220ENST00000477528 PRRC2AP48634 2157 aaKnown RBP10.76□□□□□ -0.69
HDAC6-220ENST00000477528 HIST2H2BDQ6DRA6 164 aa10.75□□□□□ -0.69
HDAC6-220ENST00000477528 LINC01006Q8NI28 216 aa10.75□□□□□ -0.69
HDAC6-220ENST00000477528 PRO0255Q9UI72 69 aa10.75□□□□□ -0.69
HDAC6-220ENST00000477528 TCL1BO95988 128 aa10.74□□□□□ -0.69
HDAC6-220ENST00000477528 DEFB121Q5J5C9 76 aa10.74□□□□□ -0.69
HDAC6-220ENST00000477528 DEFB135Q30KP9 77 aa10.74□□□□□ -0.69
HDAC6-220ENST00000477528 COL27A1Q8IZC6 1860 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-220ENST00000477528 TIRAPP58753 221 aa10.74□□□□□ -0.69
HDAC6-220ENST00000477528 HIST2H2BCQ6DN03 193 aa10.74□□□□□ -0.69
HDAC6-220ENST00000477528 COX7A2LO14548 114 aa10.73□□□□□ -0.69
HDAC6-220ENST00000477528 BAALC-AS2P0C853 105 aa10.73□□□□□ -0.69
HDAC6-220ENST00000477528 TRBV10-2A0A0K0K1G8 114 aa10.73□□□□□ -0.69
HDAC6-220ENST00000477528 KLK9Q2XQG4 91 aa10.73□□□□□ -0.69
HDAC6-220ENST00000477528 H7C423 109 aa10.72□□□□□ -0.69
HDAC6-220ENST00000477528 PRM2P04554 102 aa10.72□□□□□ -0.69
HDAC6-220ENST00000477528 DPH3Q96FX2 82 aa10.72□□□□□ -0.69
HDAC6-220ENST00000477528 IGHV3-30P01768 117 aa10.72□□□□□ -0.69
HDAC6-220ENST00000477528 IGHV3-30-5P0DP03 117 aa10.72□□□□□ -0.69
HDAC6-220ENST00000477528 TLN2Q9Y4G6 2542 aa10.72□□□□□ -0.69
HDAC6-220ENST00000477528 TRBV6-4A0A1B0GX49 114 aa10.71□□□□□ -0.69
HDAC6-220ENST00000477528 H0YGX0 51 aa10.71□□□□□ -0.69
HDAC6-220ENST00000477528 LINC01546A6NGU7 62 aa10.71□□□□□ -0.69
HDAC6-220ENST00000477528 H3BT86 120 aa10.71□□□□□ -0.69
HDAC6-220ENST00000477528 ESM1Q9NQ30 184 aa10.71□□□□□ -0.69
HDAC6-220ENST00000477528 IGLV10-54A0A075B6I4 117 aa10.71□□□□□ -0.7
HDAC6-220ENST00000477528 UBE2D4Q9Y2X8 147 aa10.71□□□□□ -0.7
HDAC6-220ENST00000477528 SMIM9A6NGZ8 99 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms