RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 FRZBQ92765 325 aa11.75□□□□□ -0.53
C4A-253ENST00000477424 BORCS7Q96B45 105 aa11.75□□□□□ -0.53
C4A-253ENST00000477424 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
C4A-253ENST00000477424 SMDT1Q9H4I9 107 aa11.75□□□□□ -0.53
C4A-253ENST00000477424 PRR34Q9NV39 138 aa11.75□□□□□ -0.53
C4A-253ENST00000477424 C20orf203Q8NBC4 194 aa11.74□□□□□ -0.53
C4A-253ENST00000477424 RNF185Q96GF1 192 aa11.74□□□□□ -0.53
C4A-253ENST00000477424 TMEM191AQ9H0A3 160 aa11.74□□□□□ -0.53
C4A-253ENST00000477424 ABCA13Q86UQ4 5058 aa11.74□□□□□ -0.53
C4A-253ENST00000477424 IGLV4-60A0A075B6I1 120 aa11.73□□□□□ -0.53
C4A-253ENST00000477424 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.73□□□□□ -0.53
C4A-253ENST00000477424 COTL1Q14019 142 aa11.73□□□□□ -0.53
C4A-253ENST00000477424 LINC00269Q8N2A0 174 aa11.73□□□□□ -0.53
C4A-253ENST00000477424 C1orf43Q9BWL3 253 aa11.73□□□□□ -0.53
C4A-253ENST00000477424 AMTP48728 403 aa11.72□□□□□ -0.53
C4A-253ENST00000477424 HAMPP81172 84 aa11.72□□□□□ -0.53
C4A-253ENST00000477424 MIAQ16674 131 aa11.72□□□□□ -0.53
C4A-253ENST00000477424 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
C4A-253ENST00000477424 AMN1Q8IY45 258 aa11.72□□□□□ -0.53
C4A-253ENST00000477424 Q8N1X5 172 aa11.72□□□□□ -0.53
C4A-253ENST00000477424 SDHAF1A6NFY7 115 aa11.71□□□□□ -0.53
C4A-253ENST00000477424 RPS10P46783 165 aaKnown RBP11.71□□□□□ -0.53
C4A-253ENST00000477424 NAT8BQ9UHF3 227 aa11.71□□□□□ -0.53
C4A-253ENST00000477424 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
C4A-253ENST00000477424 SMIM27A0A1W2PRY6 76 aa11.7□□□□□ -0.54
C4A-253ENST00000477424 HLA-DQA1P01909 254 aa11.7□□□□□ -0.54
C4A-253ENST00000477424 RAB4AP20338 218 aa11.7□□□□□ -0.54
C4A-253ENST00000477424 A0A1B0GUV1 79 aa11.69□□□□□ -0.54
C4A-253ENST00000477424 NCR2O95944 276 aa11.69□□□□□ -0.54
C4A-253ENST00000477424 REG3AQ06141 175 aa11.69□□□□□ -0.54
C4A-253ENST00000477424 RIGQ13278 110 aa11.69□□□□□ -0.54
C4A-253ENST00000477424 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
C4A-253ENST00000477424 FAM30AQ9NZY2 134 aa11.69□□□□□ -0.54
C4A-253ENST00000477424 SMKR1H3BMG3 65 aa11.68□□□□□ -0.54
C4A-253ENST00000477424 UBE2L6O14933 153 aa11.68□□□□□ -0.54
C4A-253ENST00000477424 IGLV10-54A0A075B6I4 117 aa11.67□□□□□ -0.54
C4A-253ENST00000477424 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.67□□□□□ -0.54
C4A-253ENST00000477424 IGKV2-29A2NJV5 120 aaPredicted RBP11.67□□□□□ -0.54
C4A-253ENST00000477424 APCSP02743 223 aa11.67□□□□□ -0.54
C4A-253ENST00000477424 MRAP2Q96G30 205 aa11.67□□□□□ -0.54
C4A-253ENST00000477424 TMEM70Q9BUB7 260 aa11.67□□□□□ -0.54
C4A-253ENST00000477424 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
C4A-253ENST00000477424 TSHBP01222 138 aa11.66□□□□□ -0.54
C4A-253ENST00000477424 ST20Q9HBF5 79 aa11.66□□□□□ -0.54
C4A-253ENST00000477424 TMEM242Q9NWH2 141 aa11.66□□□□□ -0.54
C4A-253ENST00000477424 I3L3M4 83 aa11.65□□□□□ -0.54
C4A-253ENST00000477424 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.54
C4A-253ENST00000477424 RAB14P61106 215 aa11.65□□□□□ -0.54
C4A-253ENST00000477424 IFITM2Q01629 132 aa11.65□□□□□ -0.54
C4A-253ENST00000477424 NRACQ8N912 160 aa11.65□□□□□ -0.54
C4A-253ENST00000477424 PMCHP20382 165 aa11.64□□□□□ -0.55
C4A-253ENST00000477424 CAMPP49913 170 aa11.64□□□□□ -0.55
C4A-253ENST00000477424 CLLU1Q5K131 121 aa11.64□□□□□ -0.55
C4A-253ENST00000477424 MRPL51Q4U2R6 128 aaKnown RBP11.63□□□□□ -0.55
C4A-253ENST00000477424 FAM104BQ5XKR9 115 aa11.63□□□□□ -0.55
C4A-253ENST00000477424 MRPL54Q6P161 138 aaKnown RBP11.63□□□□□ -0.55
C4A-253ENST00000477424 Q6ZSA8 131 aa11.63□□□□□ -0.55
C4A-253ENST00000477424 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
C4A-253ENST00000477424 A0A1B0GXF2 115 aa11.62□□□□□ -0.55
C4A-253ENST00000477424 PRSS1P07477 247 aa11.62□□□□□ -0.55
C4A-253ENST00000477424 FGF6P10767 208 aa11.62□□□□□ -0.55
C4A-253ENST00000477424 ESDP10768 282 aa11.62□□□□□ -0.55
C4A-253ENST00000477424 DNAH8Q96JB1 4490 aa11.62□□□□□ -0.55
C4A-253ENST00000477424 FAT1Q14517 4588 aa11.61□□□□□ -0.55
C4A-253ENST00000477424 TRAV8-4A0A0B4J246 113 aa11.61□□□□□ -0.55
C4A-253ENST00000477424 SMR3BP02814 79 aaPredicted RBP11.61□□□□□ -0.55
C4A-253ENST00000477424 C14orf177Q52M58 125 aa11.61□□□□□ -0.55
C4A-253ENST00000477424 AMMECR1LQ6DCA0 310 aa11.61□□□□□ -0.55
C4A-253ENST00000477424 RNASEKQ6P5S7 137 aaKnown RBP11.61□□□□□ -0.55
C4A-253ENST00000477424 IGKV3OR2-268A0A0C4DH90 116 aa11.6□□□□□ -0.55
C4A-253ENST00000477424 H7C423 109 aa11.6□□□□□ -0.55
C4A-253ENST00000477424 HBBP68871 147 aa11.6□□□□□ -0.55
C4A-253ENST00000477424 A0A1B0GW15 77 aa11.59□□□□□ -0.55
C4A-253ENST00000477424 SUMO2P61956 95 aaKnown RBP11.59□□□□□ -0.55
C4A-253ENST00000477424 Q5VSD8 79 aa11.59□□□□□ -0.55
C4A-253ENST00000477424 EPM2AB3EWF7 344 aa11.58□□□□□ -0.56
C4A-253ENST00000477424 PNRC1Q12796 327 aaPredicted RBP11.58□□□□□ -0.56
C4A-253ENST00000477424 ZNF25P17030 456 aaPredicted RBP11.57□□□□□ -0.56
C4A-253ENST00000477424 ADCYAP1P18509 176 aa11.57□□□□□ -0.56
C4A-253ENST00000477424 C7orf77A4D0Y5 90 aa11.56□□□□□ -0.56
C4A-253ENST00000477424 GAGE12HA6NDE8 117 aa11.56□□□□□ -0.56
C4A-253ENST00000477424 D6R8Y8 96 aa11.56□□□□□ -0.56
C4A-253ENST00000477424 VCYO14598 125 aa11.56□□□□□ -0.56
C4A-253ENST00000477424 PPP1R2P9O14990 202 aa11.56□□□□□ -0.56
C4A-253ENST00000477424 LINC00862A6NCI5 91 aa11.55□□□□□ -0.56
C4A-253ENST00000477424 PPP1R17O96001 155 aa11.55□□□□□ -0.56
C4A-253ENST00000477424 S100A8P05109 93 aa11.55□□□□□ -0.56
C4A-253ENST00000477424 CKS2P33552 79 aa11.55□□□□□ -0.56
C4A-253ENST00000477424 MRPL52Q86TS9 123 aaKnown RBP11.55□□□□□ -0.56
C4A-253ENST00000477424 CHCHD10Q8WYQ3 142 aaPredicted RBP11.55□□□□□ -0.56
C4A-253ENST00000477424 TRBV24-1A0A075B6N3 115 aa11.54□□□□□ -0.56
C4A-253ENST00000477424 TNFRSF6BO95407 300 aa11.54□□□□□ -0.56
C4A-253ENST00000477424 NPYP01303 97 aa11.54□□□□□ -0.56
C4A-253ENST00000477424 FCER1GP30273 86 aa11.54□□□□□ -0.56
C4A-253ENST00000477424 SCXQ7RTU7 201 aa11.54□□□□□ -0.56
C4A-253ENST00000477424 ATP5L2Q7Z4Y8 100 aa11.54□□□□□ -0.56
C4A-253ENST00000477424 C15orf56Q8N910 161 aa11.54□□□□□ -0.56
C4A-253ENST00000477424 OR5A1Q8NGJ0 315 aa11.54□□□□□ -0.56
C4A-253ENST00000477424 F8W036 122 aa11.53□□□□□ -0.56
C4A-253ENST00000477424 MT-ND4LP03901 98 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms