RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 A0A096LNJ9 63 aa8.24□□□□□ -1.09
COL27A1-204ENST00000477421 MALP21145 153 aa8.24□□□□□ -1.09
COL27A1-204ENST00000477421 C2orf91Q6ZV80 131 aa8.24□□□□□ -1.09
COL27A1-204ENST00000477421 ZNF843Q8N446 348 aa8.23□□□□□ -1.09
COL27A1-204ENST00000477421 DEFB4AO15263 64 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 TIRAPP58753 221 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 RHOHQ15669 191 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 Q6YL49 198 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 COPS9Q8WXC6 57 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 ATRQ13535 2644 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 DNAJC9-AS1A6NH13 148 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 E9PLD3 99 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 TTC32Q5I0X7 151 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 A0A0J9YY99 117 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 H3BMM0 161 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 TMEM243Q9BU79 118 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 MAP6D1Q9H9H5 199 aa8.22□□□□□ -1.09
COL27A1-204ENST00000477421 LAMA5O15230 3695 aa8.21□□□□□ -1.09
COL27A1-204ENST00000477421 TAL2Q16559 108 aa8.21□□□□□ -1.09
COL27A1-204ENST00000477421 C20orf203Q8NBC4 194 aa8.21□□□□□ -1.09
COL27A1-204ENST00000477421 DCANP1Q8TF63 244 aa8.21□□□□□ -1.09
COL27A1-204ENST00000477421 NXPH4O95158 308 aa8.21□□□□□ -1.09
COL27A1-204ENST00000477421 IGLV1-40P01703 118 aa8.21□□□□□ -1.09
COL27A1-204ENST00000477421 MUC4Q99102 2169 aa8.21□□□□□ -1.1
COL27A1-204ENST00000477421 TRAV12-1A0A0B4J245 112 aa8.21□□□□□ -1.1
COL27A1-204ENST00000477421 Q9H8V8 135 aa8.21□□□□□ -1.1
COL27A1-204ENST00000477421 MUSTN1Q8IVN3 82 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 CHD6Q8TD26 2715 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 CKS1BP61024 79 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 F5H768 121 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 CMC4P56277 68 aaPredicted RBP8.2□□□□□ -1.1
COL27A1-204ENST00000477421 Q6ZTI0 123 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 C5orf38Q86SI9 138 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 PTH2Q96A98 100 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 HELZ2Q9BYK8 2649 aaKnown RBP8.2□□□□□ -1.1
COL27A1-204ENST00000477421 MED14OSP0DP75 135 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 Q6ZSV7 163 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 NEXN-AS1Q8NBZ9 246 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 HIGD1BQ9P298 99 aa8.2□□□□□ -1.1
COL27A1-204ENST00000477421 F8W1H4 67 aa8.19□□□□□ -1.1
COL27A1-204ENST00000477421 CNFNQ9BYD5 112 aa8.19□□□□□ -1.1
COL27A1-204ENST00000477421 WFDC10AQ9H1F0 79 aa8.19□□□□□ -1.1
COL27A1-204ENST00000477421 ZNF702PQ9H963 129 aa8.19□□□□□ -1.1
COL27A1-204ENST00000477421 BBC3Q96PG8 261 aaPredicted RBP8.19□□□□□ -1.1
COL27A1-204ENST00000477421 TIMM17AQ99595 171 aa8.19□□□□□ -1.1
COL27A1-204ENST00000477421 TRAV25A0A0B4J276 109 aa8.19□□□□□ -1.1
COL27A1-204ENST00000477421 M0QY20 66 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 CRPP02741 224 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 ATXN8Q156A1 80 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 DEFB114Q30KQ6 69 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 F8P00451 2351 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 A8MZ25 164 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 XCL1P47992 114 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 Q6ZUT4 128 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 KLLNB2CW77 178 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 TSPAN13O95857 204 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 CFC1P0CG37 223 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 HHLA3Q9XRX5 114 aa8.18□□□□□ -1.1
COL27A1-204ENST00000477421 C4orf3Q8WVX3 66 aa8.17□□□□□ -1.1
COL27A1-204ENST00000477421 TMEM89A2RUT3 159 aa8.17□□□□□ -1.1
COL27A1-204ENST00000477421 IGSF10Q6WRI0 2623 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 IGLV10-54A0A075B6I4 117 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 LEPROTO15243 131 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 SLC25A20O43772 301 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 IGHV3-30-3P0DP02 117 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 TRBV7-3A0A075B6L6 115 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 ZFHX4Q86UP3 3567 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 TRBV20-1A0A075B6N2 111 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 TRAV8-4A0A0B4J246 113 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 CRYGDP07320 174 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 DAD1P61803 113 aa8.16□□□□□ -1.1
COL27A1-204ENST00000477421 NTN5Q8WTR8 489 aaPredicted RBP8.16□□□□□ -1.1
COL27A1-204ENST00000477421 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.1
COL27A1-204ENST00000477421 TMEM86BQ8N661 226 aa8.15□□□□□ -1.1
COL27A1-204ENST00000477421 ITPR1Q14643 2758 aa8.15□□□□□ -1.1
COL27A1-204ENST00000477421 HERVK_113P63121 156 aa8.15□□□□□ -1.11
COL27A1-204ENST00000477421 C10orf126Q8N4M7 172 aa8.15□□□□□ -1.11
COL27A1-204ENST00000477421 LINC00467Q9BRT7 94 aa8.15□□□□□ -1.11
COL27A1-204ENST00000477421 SPANXA1Q9NS26 97 aa8.15□□□□□ -1.11
COL27A1-204ENST00000477421 MGAM2Q2M2H8 2515 aa8.15□□□□□ -1.11
COL27A1-204ENST00000477421 ANGP03950 147 aaKnown RBP8.14□□□□□ -1.11
COL27A1-204ENST00000477421 RELNP78509 3460 aa8.14□□□□□ -1.11
COL27A1-204ENST00000477421 RBMY1BA6NDE4 496 aaKnown RBP8.14□□□□□ -1.11
COL27A1-204ENST00000477421 RBMY1EA6NEQ0 496 aaKnown RBP8.14□□□□□ -1.11
COL27A1-204ENST00000477421 LGALS9O00182 355 aa8.14□□□□□ -1.11
COL27A1-204ENST00000477421 RBMY1DP0C7P1 496 aaKnown RBP8.14□□□□□ -1.11
COL27A1-204ENST00000477421 RBMY1A1P0DJD3 496 aaKnown RBP8.14□□□□□ -1.11
COL27A1-204ENST00000477421 RBMY1CP0DJD4 496 aa8.14□□□□□ -1.11
COL27A1-204ENST00000477421 CDKN2A-AS1Q9UH64 79 aa8.14□□□□□ -1.11
COL27A1-204ENST00000477421 COL27A1Q8IZC6 1860 aaPredicted RBP8.14□□□□□ -1.11
COL27A1-204ENST00000477421 POLR2KP53803 58 aaKnown RBP8.14□□□□□ -1.11
COL27A1-204ENST00000477421 SS18Q15532 418 aa8.14□□□□□ -1.11
COL27A1-204ENST00000477421 IGLV4-3A0A075B6K6 122 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 K7EQD1 137 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 DEFB135Q30KP9 77 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 CRLF1O75462 422 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 GYPEP15421 78 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 SMR3AQ99954 134 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms