RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 ZNF815PA8K554 130 aa11.31□□□□□ -0.6
LINC00996-201ENST00000477392 GIG44P09565 113 aaPredicted RBP11.31□□□□□ -0.6
LINC00996-201ENST00000477392 SMIM13P0DJ93 91 aa11.31□□□□□ -0.6
LINC00996-201ENST00000477392 HERVK_113P61574 105 aa11.31□□□□□ -0.6
LINC00996-201ENST00000477392 JMJD1CQ15652 2540 aa11.31□□□□□ -0.6
LINC00996-201ENST00000477392 TSPEAR-AS2P59090 65 aa11.31□□□□□ -0.6
LINC00996-201ENST00000477392 KRTAP10-3P60369 221 aa11.31□□□□□ -0.6
LINC00996-201ENST00000477392 PLEKHB2Q96CS7 222 aa11.31□□□□□ -0.6
LINC00996-201ENST00000477392 HECTD1Q9ULT8 2610 aa11.3□□□□□ -0.6
LINC00996-201ENST00000477392 LY6G6DO95868 133 aa11.3□□□□□ -0.6
LINC00996-201ENST00000477392 TMEM170BQ5T4T1 132 aa11.3□□□□□ -0.6
LINC00996-201ENST00000477392 HIST1H4GQ99525 98 aa11.3□□□□□ -0.6
LINC00996-201ENST00000477392 CHCHD7Q9BUK0 85 aa11.3□□□□□ -0.6
LINC00996-201ENST00000477392 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
LINC00996-201ENST00000477392 PYGO1Q9Y3Y4 419 aa11.3□□□□□ -0.6
LINC00996-201ENST00000477392 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
LINC00996-201ENST00000477392 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
LINC00996-201ENST00000477392 FAM110AQ9BQ89 295 aa11.3□□□□□ -0.6
LINC00996-201ENST00000477392 DNAJC30Q96LL9 226 aa11.29□□□□□ -0.6
LINC00996-201ENST00000477392 A0A1W2PPM0 123 aa11.28□□□□□ -0.6
LINC00996-201ENST00000477392 TMEM263Q8WUH6 116 aaKnown RBP11.28□□□□□ -0.6
LINC00996-201ENST00000477392 AMELXQ99217 191 aa11.28□□□□□ -0.6
LINC00996-201ENST00000477392 TRGV1A0A0A0MS02 117 aa11.28□□□□□ -0.6
LINC00996-201ENST00000477392 CEMP1Q6PRD7 247 aaPredicted RBP11.28□□□□□ -0.6
LINC00996-201ENST00000477392 VCX2Q9H322 139 aa11.28□□□□□ -0.6
LINC00996-201ENST00000477392 A0A0J9YXV3 536 aa11.27□□□□□ -0.61
LINC00996-201ENST00000477392 K7EP34 96 aa11.27□□□□□ -0.61
LINC00996-201ENST00000477392 ZNF22P17026 224 aaPredicted RBP11.27□□□□□ -0.61
LINC00996-201ENST00000477392 IGHV3-38A0A0C4DH36 116 aa11.26□□□□□ -0.61
LINC00996-201ENST00000477392 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
LINC00996-201ENST00000477392 GAGE10A6NGK3 116 aa11.26□□□□□ -0.61
LINC00996-201ENST00000477392 Q6ZTI0 123 aa11.26□□□□□ -0.61
LINC00996-201ENST00000477392 SCGB1D4Q6XE38 83 aa11.26□□□□□ -0.61
LINC00996-201ENST00000477392 ZNF479Q96JC4 524 aa11.26□□□□□ -0.61
LINC00996-201ENST00000477392 UBE2D4Q9Y2X8 147 aa11.26□□□□□ -0.61
LINC00996-201ENST00000477392 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
LINC00996-201ENST00000477392 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
LINC00996-201ENST00000477392 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
LINC00996-201ENST00000477392 CRYBA4P53673 196 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 SAMD5Q5TGI4 173 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 NDUFA11Q86Y39 141 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 A0A0J9YY99 117 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 A0A1B0GWB2 263 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 PLAC8L1A1L4L8 177 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 J3QQQ9 107 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 GTF2H5Q6ZYL4 71 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 OR5A1Q8NGJ0 315 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
LINC00996-201ENST00000477392 COTL1Q14019 142 aa11.24□□□□□ -0.61
LINC00996-201ENST00000477392 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
LINC00996-201ENST00000477392 CSNK1G2-AS1Q8NCQ2 148 aa11.24□□□□□ -0.61
LINC00996-201ENST00000477392 TRAV4A0A0B4J268 109 aa11.23□□□□□ -0.61
LINC00996-201ENST00000477392 LEPROTO15243 131 aa11.23□□□□□ -0.61
LINC00996-201ENST00000477392 FABP2P12104 132 aa11.23□□□□□ -0.61
LINC00996-201ENST00000477392 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
LINC00996-201ENST00000477392 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
LINC00996-201ENST00000477392 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
LINC00996-201ENST00000477392 SPCS1Q9Y6A9 102 aa11.23□□□□□ -0.61
LINC00996-201ENST00000477392 NOTCH3Q9UM47 2321 aa11.22□□□□□ -0.61
LINC00996-201ENST00000477392 IGLL5B9A064 214 aa11.22□□□□□ -0.61
LINC00996-201ENST00000477392 Q6ZUT4 128 aa11.22□□□□□ -0.61
LINC00996-201ENST00000477392 LINC00482Q8N8I6 264 aa11.22□□□□□ -0.61
LINC00996-201ENST00000477392 OTOGQ6ZRI0 2925 aa11.22□□□□□ -0.61
LINC00996-201ENST00000477392 K7EQD1 137 aa11.21□□□□□ -0.61
LINC00996-201ENST00000477392 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.61
LINC00996-201ENST00000477392 C16orf74Q96GX8 76 aa11.21□□□□□ -0.61
LINC00996-201ENST00000477392 GAGE12BA1L429 117 aa11.21□□□□□ -0.62
LINC00996-201ENST00000477392 SPANXB1Q9NS25 103 aaPredicted RBP11.21□□□□□ -0.62
LINC00996-201ENST00000477392 IGHV3-64A0A075B6Q5 118 aa11.2□□□□□ -0.62
LINC00996-201ENST00000477392 INAFM1C9JVW0 142 aa11.2□□□□□ -0.62
LINC00996-201ENST00000477392 PF4P02776 101 aa11.2□□□□□ -0.62
LINC00996-201ENST00000477392 C1QTNF4Q9BXJ3 329 aa11.2□□□□□ -0.62
LINC00996-201ENST00000477392 TRBV10-1A0A0K0K1A3 114 aa11.19□□□□□ -0.62
LINC00996-201ENST00000477392 SRSF9Q13242 221 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC00996-201ENST00000477392 SLC25A29Q8N8R3 303 aa11.19□□□□□ -0.62
LINC00996-201ENST00000477392 NOTCH2Q04721 2471 aa11.19□□□□□ -0.62
LINC00996-201ENST00000477392 UBE2D1P51668 147 aa11.18□□□□□ -0.62
LINC00996-201ENST00000477392 NSD1Q96L73 2696 aaPredicted RBP11.18□□□□□ -0.62
LINC00996-201ENST00000477392 C2CD3Q4AC94 2353 aa11.18□□□□□ -0.62
LINC00996-201ENST00000477392 TINCRA0A1B0GVN0 87 aa11.18□□□□□ -0.62
LINC00996-201ENST00000477392 IGHV3-30P01768 117 aa11.18□□□□□ -0.62
LINC00996-201ENST00000477392 IGHV3-30-5P0DP03 117 aa11.18□□□□□ -0.62
LINC00996-201ENST00000477392 RPL36AP83881 106 aaKnown RBP11.18□□□□□ -0.62
LINC00996-201ENST00000477392 RRN3P1Q2M238 152 aa11.18□□□□□ -0.62
LINC00996-201ENST00000477392 RPL36ALQ969Q0 106 aaKnown RBP11.18□□□□□ -0.62
LINC00996-201ENST00000477392 OVOL2Q9BRP0 275 aa11.18□□□□□ -0.62
LINC00996-201ENST00000477392 TIMM21Q9BVV7 248 aa11.18□□□□□ -0.62
LINC00996-201ENST00000477392 UBE2D3P61077 147 aa11.17□□□□□ -0.62
LINC00996-201ENST00000477392 UBE2D2P62837 147 aa11.17□□□□□ -0.62
LINC00996-201ENST00000477392 TMEM238LA0A1B0GVL6 79 aa11.16□□□□□ -0.62
LINC00996-201ENST00000477392 A6NJY4 79 aa11.16□□□□□ -0.62
LINC00996-201ENST00000477392 GAGE7O76087 117 aa11.16□□□□□ -0.62
LINC00996-201ENST00000477392 GAGE12FP0CL80 117 aa11.16□□□□□ -0.62
LINC00996-201ENST00000477392 GAGE12GP0CL81 117 aa11.16□□□□□ -0.62
LINC00996-201ENST00000477392 GAGE12IP0CL82 117 aa11.16□□□□□ -0.62
LINC00996-201ENST00000477392 IGHV3-30-3P0DP02 117 aa11.16□□□□□ -0.62
LINC00996-201ENST00000477392 NTM-AS1Q6ZSK4 140 aa11.16□□□□□ -0.62
LINC00996-201ENST00000477392 SPATA3Q8NHX4 192 aa11.16□□□□□ -0.62
LINC00996-201ENST00000477392 LINC00694P0DN24 101 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms